Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018393.1-P | Field mustard | cytosol | 83.03 | 87.79 |
| CDY45441 | Canola | cytosol | 69.31 | 85.71 |
| CDY45438 | Canola | cytosol | 77.26 | 81.68 |
| CDY40179 | Canola | cytosol, peroxisome, plastid | 76.9 | 81.61 |
| CDY40165 | Canola | plastid | 76.9 | 81.3 |
| CDY40171 | Canola | cytosol | 61.73 | 77.38 |
| CDY40175 | Canola | plasma membrane | 71.84 | 75.95 |
| AT2G30670.1 | Thale cress | cytosol, nucleus, peroxisome | 71.12 | 75.19 |
| CDY62820 | Canola | cytosol, endoplasmic reticulum, peroxisome | 71.12 | 74.9 |
| CDY31774 | Canola | cytosol | 63.54 | 74.89 |
| CDX97895 | Canola | cytosol | 63.18 | 74.47 |
| CDY31770 | Canola | plastid | 62.09 | 74.14 |
| CDY45434 | Canola | cytosol, nucleus, plastid | 66.43 | 70.23 |
| CDY31772 | Canola | cytosol, peroxisome, plastid | 66.43 | 70.23 |
| CDY40183 | Canola | plastid | 65.7 | 69.47 |
| CDY31768 | Canola | cytosol, peroxisome, plastid | 65.34 | 69.08 |
| CDY31773 | Canola | plastid | 64.98 | 68.7 |
| CDX83306 | Canola | plastid | 64.26 | 67.94 |
| CDX97899 | Canola | peroxisome | 63.9 | 67.56 |
| CDY45432 | Canola | cytosol | 63.9 | 67.56 |
| CDY40188 | Canola | cytosol, peroxisome, plasma membrane | 63.9 | 67.56 |
| CDX83307 | Canola | peroxisome | 63.54 | 67.18 |
| CDX95753 | Canola | cytosol, peroxisome, plastid | 63.54 | 67.18 |
| CDX97897 | Canola | cytosol, extracellular | 55.23 | 66.23 |
| CDX95751 | Canola | peroxisome | 62.45 | 66.03 |
| CDY40185 | Canola | plastid | 61.73 | 65.27 |
| CDY64214 | Canola | mitochondrion | 39.71 | 64.33 |
| CDY40186 | Canola | cytosol | 48.01 | 64.25 |
| CDY40182 | Canola | cytosol, peroxisome, plastid | 60.29 | 63.74 |
| CDY45435 | Canola | cytosol, peroxisome, plastid | 59.93 | 63.36 |
| VIT_06s0004g05400.t01 | Wine grape | cytosol | 25.27 | 63.06 |
| CDX86486 | Canola | cytosol, peroxisome, plastid | 58.84 | 62.21 |
| CDY45433 | Canola | cytosol | 54.15 | 61.22 |
| VIT_06s0004g05310.t01 | Wine grape | cytosol | 24.91 | 61.06 |
| VIT_06s0004g05440.t01 | Wine grape | cytosol | 18.05 | 60.98 |
| Solyc03g096650.1.1 | Tomato | cytosol | 19.49 | 60.67 |
| CDY68057 | Canola | cytosol | 57.04 | 60.31 |
| CDX95752 | Canola | cytosol | 51.62 | 60.08 |
| CDY09917 | Canola | cytosol | 56.68 | 59.92 |
| CDY06260 | Canola | plastid | 56.32 | 59.54 |
| CDY06706 | Canola | mitochondrion | 57.04 | 59.4 |
| CDX86485 | Canola | cytosol, peroxisome, plastid | 55.96 | 59.16 |
| CDY10276 | Canola | mitochondrion | 56.32 | 58.65 |
| CDY14610 | Canola | mitochondrion | 56.32 | 58.65 |
| CDY52942 | Canola | mitochondrion | 55.6 | 57.89 |
| CDY16437 | Canola | mitochondrion | 55.23 | 57.52 |
| CDY72061 | Canola | cytosol | 21.66 | 55.05 |
| VIT_06s0004g05320.t01 | Wine grape | endoplasmic reticulum, peroxisome, plastid | 49.82 | 54.76 |
| VIT_06s0004g05370.t01 | Wine grape | peroxisome | 49.46 | 54.37 |
| CDY09824 | Canola | mitochondrion | 52.71 | 53.87 |
| CDY09823 | Canola | peroxisome | 52.71 | 53.87 |
| CDX97893 | Canola | mitochondrion | 52.71 | 53.87 |
| VIT_06s0004g05380.t01 | Wine grape | plastid | 52.35 | 53.7 |
| CDY31776 | Canola | cytosol, peroxisome, plastid | 52.35 | 53.51 |
| CDX70101 | Canola | peroxisome | 49.82 | 52.67 |
| CDY04977 | Canola | peroxisome | 49.46 | 52.09 |
| KRH24731 | Soybean | nucleus | 50.18 | 52.06 |
| CDX98899 | Canola | peroxisome | 49.1 | 51.91 |
| CDY51372 | Canola | plastid | 51.99 | 51.61 |
| VIT_06s0004g05430.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 50.18 | 51.48 |
| CDY14094 | Canola | peroxisome | 48.74 | 51.33 |
| KRH24733 | Soybean | nucleus | 49.1 | 51.32 |
| VIT_06s0004g05330.t01 | Wine grape | peroxisome | 46.57 | 50.79 |
| KRH29740 | Soybean | cytosol | 17.69 | 50.0 |
| KRH24732 | Soybean | cytosol, endoplasmic reticulum, plastid | 48.38 | 49.81 |
| CDX95750 | Canola | cytosol | 48.74 | 49.27 |
| VIT_06s0004g05360.t01 | Wine grape | cytosol, mitochondrion, plastid | 41.88 | 48.33 |
| GSMUA_Achr5P04570_001 | Banana | cytosol | 21.66 | 47.24 |
| VIT_06s0004g05390.t01 | Wine grape | cytosol, plasma membrane, plastid | 40.43 | 45.53 |
| CDX97890 | Canola | cytosol | 52.35 | 42.77 |
| CDY04975 | Canola | mitochondrion | 16.97 | 41.96 |
| CDX98898 | Canola | cytosol, peroxisome, plasma membrane | 46.93 | 41.94 |
| VIT_06s0004g05450.t01 | Wine grape | plasma membrane | 26.71 | 41.11 |
| CDY65683 | Canola | cytosol, mitochondrion | 56.32 | 39.1 |
| CDY16436 | Canola | endoplasmic reticulum, vacuole | 14.8 | 39.05 |
| CDY35991 | Canola | plastid | 17.33 | 38.71 |
| CDY31767 | Canola | plastid | 59.21 | 29.13 |
| CDY35231 | Canola | peroxisome | 12.27 | 27.42 |
| CDY16690 | Canola | peroxisome | 24.91 | 27.06 |
| CDX94534 | Canola | peroxisome | 24.55 | 26.67 |
| CDY50145 | Canola | plastid | 66.06 | 25.28 |
| CDX76382 | Canola | cytosol, mitochondrion, peroxisome | 22.74 | 24.51 |
| CDY27447 | Canola | cytosol, mitochondrion, peroxisome | 22.74 | 24.42 |
| CDY17559 | Canola | cytoskeleton, nucleus, peroxisome | 23.83 | 23.0 |
| CDY43488 | Canola | cytosol | 23.83 | 22.84 |
| CDY27781 | Canola | cytosol, peroxisome, plastid | 23.1 | 22.15 |
| CDY05152 | Canola | cytosol | 16.97 | 19.67 |
| CDY08402 | Canola | cytosol | 19.86 | 18.71 |
| CDY05153 | Canola | cytosol, nucleus, plastid | 4.69 | 18.57 |
| CDY00799 | Canola | peroxisome | 19.13 | 17.79 |
| CDX73802 | Canola | peroxisome | 19.13 | 17.79 |
Protein Annotations
| EnsemblPlants:CDY40177 | EnsemblPlantsGene:GSBRNA2T00069309001 | Gene3D:3.40.50.720 | GO:A0A078HQR1 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
| PANTHER:PTHR42898 | PANTHER:PTHR42898:SF7 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ProteinID:CDY40177 |
| ProteinID:CDY40177.1 | SEG:seg | SUPFAM:SSF51735 | UniParc:UPI0004EF1023 | UniProt:A0A078HQR1 | MapMan:50.1.1 |
Description
BnaC04g14050DBnaC04g14050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HQR1]
Coordinates
chrLK032465:+:146591..148085
Molecular Weight (calculated)
30284.9 Da
IEP (calculated)
6.150
GRAVY (calculated)
0.274
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKRWSLQGM TALVTGGASG IGHAIVEELA SFGATIHVCD ISETLLNQRL SEWENKGFQV SGSICDVSSR PERETLMLTV SKMFDGKLTI LVNNVGVVRL
101: KPTTEYVADD FSFHISTNLE SAYYLSQLSH PLLKASGFGS IVMNSSVGGV VSMECGSLYC LTKGAMNQLA RSLACEWATD GIRINSVAPN FILNDMAEPH
201: LEDAGYKKSL FSRTPLGRAG EPKEVASLVA FCVYLQLHIL LVRPFVLMEV SLSMVSHISD RLEPYLCVCF LIICLCK
101: KPTTEYVADD FSFHISTNLE SAYYLSQLSH PLLKASGFGS IVMNSSVGGV VSMECGSLYC LTKGAMNQLA RSLACEWATD GIRINSVAPN FILNDMAEPH
201: LEDAGYKKSL FSRTPLGRAG EPKEVASLVA FCVYLQLHIL LVRPFVLMEV SLSMVSHISD RLEPYLCVCF LIICLCK
001: MDKRWSLQGM TALVTGAASG IGYAIVEELA GFGARIHVCD ISETLLNQSL REWEKKGFQV SGSVCDVTSR PEREKLMQTV SSLFDGKLNI LVNNVGVLRA
101: KPTTEYVADD FTFHISTNLE AAYHFCQLSH PLLKTSGYGS IVFLSSVSGV VSITDCGSLY GLTKGALNQL ARNLACEWAK DGIRANAVAP NVVKTAQSQF
201: FLQDVSKKEG LFSRTPLGRS GEPNEVASLV VFLCLPAASY ITGQTICIDG GLTVYGFSSQ PQA
101: KPTTEYVADD FTFHISTNLE AAYHFCQLSH PLLKTSGYGS IVFLSSVSGV VSITDCGSLY GLTKGALNQL ARNLACEWAK DGIRANAVAP NVVKTAQSQF
201: FLQDVSKKEG LFSRTPLGRS GEPNEVASLV VFLCLPAASY ITGQTICIDG GLTVYGFSSQ PQA
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IKL5]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.