Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytoskeleton, nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- peroxisome 1
- mitochondrion 1
- cytoskeleton 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43488 | Canola | cytosol | 97.91 | 97.23 |
| AT1G54870.2 | Thale cress | plastid | 92.68 | 78.93 |
| KRG92837 | Soybean | endoplasmic reticulum, nucleus | 79.44 | 77.82 |
| KRH33956 | Soybean | endoplasmic reticulum | 78.75 | 77.13 |
| CDY27781 | Canola | cytosol, peroxisome, plastid | 76.66 | 76.12 |
| CDY05153 | Canola | cytosol, nucleus, plastid | 17.07 | 70.0 |
| GSMUA_Achr4P24690_001 | Banana | cytosol | 67.94 | 65.44 |
| GSMUA_Achr4P29030_001 | Banana | cytosol | 63.41 | 62.33 |
| CDY05152 | Canola | cytosol | 51.22 | 61.51 |
| OQU77380 | Sorghum | mitochondrion | 67.6 | 59.33 |
| TraesCS1A01G083800.1 | Wheat | plastid | 71.08 | 58.79 |
| TraesCS1D01G084900.1 | Wheat | mitochondrion, plastid | 70.38 | 58.21 |
| TraesCS1B01G101100.1 | Wheat | plastid | 70.38 | 58.05 |
| Os05t0140800-01 | Rice | plastid | 68.99 | 54.25 |
| Zm00001d006796_P001 | Maize | extracellular | 65.51 | 52.51 |
| HORVU1Hr1G018140.5 | Barley | extracellular, mitochondrion | 70.73 | 50.88 |
| CDY16436 | Canola | endoplasmic reticulum, vacuole | 11.5 | 31.43 |
| CDY35991 | Canola | plastid | 13.24 | 30.65 |
| CDY06706 | Canola | mitochondrion | 27.87 | 30.08 |
| CDY14094 | Canola | peroxisome | 27.18 | 29.66 |
| CDY40186 | Canola | cytosol | 21.25 | 29.47 |
| CDY14610 | Canola | mitochondrion | 27.18 | 29.32 |
| CDY10276 | Canola | mitochondrion | 27.18 | 29.32 |
| CDY04977 | Canola | peroxisome | 26.83 | 29.28 |
| CDY09823 | Canola | peroxisome | 27.53 | 29.15 |
| CDY35231 | Canola | peroxisome | 12.54 | 29.03 |
| CDY51372 | Canola | plastid | 28.22 | 29.03 |
| CDY31776 | Canola | cytosol, peroxisome, plastid | 27.18 | 28.78 |
| CDX97893 | Canola | mitochondrion | 27.18 | 28.78 |
| CDY09824 | Canola | mitochondrion | 27.18 | 28.78 |
| CDX94534 | Canola | peroxisome | 25.44 | 28.63 |
| CDY45432 | Canola | cytosol | 26.13 | 28.63 |
| CDX70101 | Canola | peroxisome | 26.13 | 28.63 |
| CDX98899 | Canola | peroxisome | 26.13 | 28.63 |
| CDY52942 | Canola | mitochondrion | 26.48 | 28.57 |
| CDY04975 | Canola | mitochondrion | 11.15 | 28.57 |
| CDY40182 | Canola | cytosol, peroxisome, plastid | 25.78 | 28.24 |
| CDY40188 | Canola | cytosol, peroxisome, plasma membrane | 25.78 | 28.24 |
| CDY40165 | Canola | plastid | 25.78 | 28.24 |
| CDY16690 | Canola | peroxisome | 25.09 | 28.24 |
| CDY16437 | Canola | mitochondrion | 26.13 | 28.2 |
| CDX97897 | Canola | cytosol, extracellular | 22.65 | 28.14 |
| CDY68057 | Canola | cytosol | 25.44 | 27.86 |
| CDX73802 | Canola | peroxisome | 28.92 | 27.85 |
| CDY00799 | Canola | peroxisome | 28.57 | 27.52 |
| CDY45435 | Canola | cytosol, peroxisome, plastid | 25.09 | 27.48 |
| CDY31773 | Canola | plastid | 25.09 | 27.48 |
| CDX86486 | Canola | cytosol, peroxisome, plastid | 25.09 | 27.48 |
| CDX86485 | Canola | cytosol, peroxisome, plastid | 25.09 | 27.48 |
| CDY40179 | Canola | cytosol, peroxisome, plastid | 24.74 | 27.2 |
| CDY40183 | Canola | plastid | 24.74 | 27.1 |
| CDY45438 | Canola | cytosol | 24.74 | 27.1 |
| CDY45434 | Canola | cytosol, nucleus, plastid | 24.74 | 27.1 |
| CDY40175 | Canola | plasma membrane | 24.74 | 27.1 |
| CDX83306 | Canola | plastid | 24.74 | 27.1 |
| CDY09917 | Canola | cytosol | 24.74 | 27.1 |
| CDY62820 | Canola | cytosol, endoplasmic reticulum, peroxisome | 24.74 | 27.0 |
| CDX95753 | Canola | cytosol, peroxisome, plastid | 24.39 | 26.72 |
| CDX95751 | Canola | peroxisome | 24.39 | 26.72 |
| CDY31768 | Canola | cytosol, peroxisome, plastid | 24.39 | 26.72 |
| CDY06260 | Canola | plastid | 24.39 | 26.72 |
| CDY08402 | Canola | cytosol | 27.18 | 26.53 |
| CDX76382 | Canola | cytosol, mitochondrion, peroxisome | 23.69 | 26.46 |
| CDY27447 | Canola | cytosol, mitochondrion, peroxisome | 23.69 | 26.36 |
| CDX83307 | Canola | peroxisome | 24.04 | 26.34 |
| CDY40185 | Canola | plastid | 23.69 | 25.95 |
| CDY45441 | Canola | cytosol | 20.21 | 25.89 |
| CDY31772 | Canola | cytosol, peroxisome, plastid | 23.34 | 25.57 |
| CDX95750 | Canola | cytosol | 24.39 | 25.55 |
| CDX97899 | Canola | peroxisome | 23.0 | 25.19 |
| CDY64214 | Canola | mitochondrion | 14.98 | 25.15 |
| CDY72061 | Canola | cytosol | 9.41 | 24.77 |
| CDY31774 | Canola | cytosol | 20.21 | 24.68 |
| CDX97895 | Canola | cytosol | 20.21 | 24.68 |
| CDY31770 | Canola | plastid | 19.86 | 24.57 |
| CDX97890 | Canola | cytosol | 28.57 | 24.19 |
| CDY45433 | Canola | cytosol | 20.56 | 24.08 |
| CDX95752 | Canola | cytosol | 19.86 | 23.95 |
| CDY40177 | Canola | cytosol | 23.0 | 23.83 |
| CDX98898 | Canola | cytosol, peroxisome, plasma membrane | 25.44 | 23.55 |
| CDY40171 | Canola | cytosol | 18.12 | 23.53 |
| CDY65683 | Canola | cytosol, mitochondrion | 26.48 | 19.05 |
| CDY31767 | Canola | plastid | 26.83 | 13.68 |
| CDY50145 | Canola | plastid | 25.78 | 10.22 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | GO:A0A078FWT5 | UniProt:A0A078FWT5 | EnsemblPlants:CDY17559 | ProteinID:CDY17559 |
| ProteinID:CDY17559.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00001735001 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 |
| ScanProsite:PS00061 | PANTHER:PTHR43348 | PANTHER:PTHR43348:SF4 | InterPro:SDR_fam | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS |
| UniParc:UPI0004EEFDCE | : | : | : | : | : |
Description
BnaC01g26830DBnaC01g26830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FWT5]
Coordinates
chrLK032075:+:548252..549562
Molecular Weight (calculated)
31434.3 Da
IEP (calculated)
6.630
GRAVY (calculated)
-0.318
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MASERQKQGG VQPGKEHVMD PTPQFSSSDY QPSNKLRGKV ALITGGDSGI GRAVSYCFAL EGATVAFTYV KGQEEKDAQE TLQMLKEAKT SEAKDPIAIP
101: TDLGFDENCK RVVDEVVNAF GRIDVLINNA AEQYESNSIE EIDEPRLERV FRTNIFSYFF LTRHALKHMK EGSSIINTTS VNAYKGHASL LDYTATKGAI
201: VAFTRGLALQ LAEKGIRVNG VAPGPIWTPL IPASFNEEKI KNFGTEVPMK RAGQPIEVAP SYVFLACNHC SSYFTGQVLH PNGNSIH
101: TDLGFDENCK RVVDEVVNAF GRIDVLINNA AEQYESNSIE EIDEPRLERV FRTNIFSYFF LTRHALKHMK EGSSIINTTS VNAYKGHASL LDYTATKGAI
201: VAFTRGLALQ LAEKGIRVNG VAPGPIWTPL IPASFNEEKI KNFGTEVPMK RAGQPIEVAP SYVFLACNHC SSYFTGQVLH PNGNSIH
001: MAMNVLCRVF TSSRVLSSNV TFSFSQIPNN TKKPLLEKRR LSPRVCLRAM ASEKQKQHAQ PGKEHVMESS PQFSSSDYQP SNKLRGKVAL ITGGDSGIGR
101: AVGYCFASEG ATVAFTYVKG QEEKDAQETL QMLKEVKTSD SKEPIAIPTD LGFDENCKRV VDEVVNAFGR IDVLINNAAE QYESSTIEEI DEPRLERVFR
201: TNIFSYFFLT RHALKHMKEG SSIINTTSVN AYKGNASLLD YTATKGAIVA FTRGLALQLA EKGIRVNGVA PGPIWTPLIP ASFNEEKIKN FGSEVPMKRA
301: GQPIEVAPSY VFLACNHCSS YFTGQVLHPN GGAVVNA
101: AVGYCFASEG ATVAFTYVKG QEEKDAQETL QMLKEVKTSD SKEPIAIPTD LGFDENCKRV VDEVVNAFGR IDVLINNAAE QYESSTIEEI DEPRLERVFR
201: TNIFSYFFLT RHALKHMKEG SSIINTTSVN AYKGNASLLD YTATKGAIVA FTRGLALQLA EKGIRVNGVA PGPIWTPLIP ASFNEEKIKN FGSEVPMKRA
301: GQPIEVAPSY VFLACNHCSS YFTGQVLHPN GGAVVNA
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:TAIR;Acc:AT1G54870]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.