Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 2
- cytosol 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27781 | Canola | cytosol, peroxisome, plastid | 92.86 | 22.49 |
| CDY17559 | Canola | cytoskeleton, nucleus, peroxisome | 70.0 | 17.07 |
| CDY43488 | Canola | cytosol | 68.57 | 16.61 |
| KRH51046 | Soybean | cytosol, peroxisome, plastid | 67.14 | 14.73 |
| CDY72061 | Canola | cytosol | 18.57 | 11.93 |
| CDY64214 | Canola | mitochondrion | 20.0 | 8.19 |
| CDY40186 | Canola | cytosol | 20.0 | 6.76 |
| CDY04977 | Canola | peroxisome | 24.29 | 6.46 |
| CDY14094 | Canola | peroxisome | 24.29 | 6.46 |
| CDY31770 | Canola | plastid | 20.0 | 6.03 |
| CDY31774 | Canola | cytosol | 20.0 | 5.96 |
| CDX97895 | Canola | cytosol | 20.0 | 5.96 |
| CDX98899 | Canola | peroxisome | 21.43 | 5.73 |
| CDX70101 | Canola | peroxisome | 21.43 | 5.73 |
| CDY16437 | Canola | mitochondrion | 21.43 | 5.64 |
| CDY52942 | Canola | mitochondrion | 21.43 | 5.64 |
| CDY06706 | Canola | mitochondrion | 21.43 | 5.64 |
| CDY08402 | Canola | cytosol | 22.86 | 5.44 |
| CDY40171 | Canola | cytosol | 17.14 | 5.43 |
| CDX73802 | Canola | peroxisome | 22.86 | 5.37 |
| CDY00799 | Canola | peroxisome | 22.86 | 5.37 |
| CDX83307 | Canola | peroxisome | 20.0 | 5.34 |
| CDX95751 | Canola | peroxisome | 20.0 | 5.34 |
| CDY62820 | Canola | cytosol, endoplasmic reticulum, peroxisome | 20.0 | 5.32 |
| CDY14610 | Canola | mitochondrion | 20.0 | 5.26 |
| CDY10276 | Canola | mitochondrion | 20.0 | 5.26 |
| CDX97897 | Canola | cytosol, extracellular | 17.14 | 5.19 |
| CDX95750 | Canola | cytosol | 20.0 | 5.11 |
| CDX94534 | Canola | peroxisome | 18.57 | 5.1 |
| CDY16690 | Canola | peroxisome | 18.57 | 5.1 |
| CDX76382 | Canola | cytosol, mitochondrion, peroxisome | 18.57 | 5.06 |
| CDY27447 | Canola | cytosol, mitochondrion, peroxisome | 18.57 | 5.04 |
| CDY40179 | Canola | cytosol, peroxisome, plastid | 18.57 | 4.98 |
| CDY40188 | Canola | cytosol, peroxisome, plasma membrane | 18.57 | 4.96 |
| CDY40182 | Canola | cytosol, peroxisome, plastid | 18.57 | 4.96 |
| CDY40175 | Canola | plasma membrane | 18.57 | 4.96 |
| CDY45438 | Canola | cytosol | 18.57 | 4.96 |
| CDY40165 | Canola | plastid | 18.57 | 4.96 |
| CDY40183 | Canola | plastid | 18.57 | 4.96 |
| CDY31768 | Canola | cytosol, peroxisome, plastid | 18.57 | 4.96 |
| CDY45432 | Canola | cytosol | 18.57 | 4.96 |
| CDY45434 | Canola | cytosol, nucleus, plastid | 18.57 | 4.96 |
| CDX98898 | Canola | cytosol, peroxisome, plasma membrane | 21.43 | 4.84 |
| CDY09823 | Canola | peroxisome | 18.57 | 4.8 |
| CDY09824 | Canola | mitochondrion | 18.57 | 4.8 |
| CDX97893 | Canola | mitochondrion | 18.57 | 4.8 |
| CDY40177 | Canola | cytosol | 18.57 | 4.69 |
| CDY51372 | Canola | plastid | 18.57 | 4.66 |
| CDX95752 | Canola | cytosol | 15.71 | 4.62 |
| CDX86486 | Canola | cytosol, peroxisome, plastid | 17.14 | 4.58 |
| CDY68057 | Canola | cytosol | 17.14 | 4.58 |
| CDY40185 | Canola | plastid | 17.14 | 4.58 |
| CDY45435 | Canola | cytosol, peroxisome, plastid | 17.14 | 4.58 |
| CDX83306 | Canola | plastid | 17.14 | 4.58 |
| CDY31773 | Canola | plastid | 17.14 | 4.58 |
| CDY31772 | Canola | cytosol, peroxisome, plastid | 17.14 | 4.58 |
| CDX95753 | Canola | cytosol, peroxisome, plastid | 17.14 | 4.58 |
| CDY31776 | Canola | cytosol, peroxisome, plastid | 17.14 | 4.43 |
| CDY09917 | Canola | cytosol | 15.71 | 4.2 |
| CDX86485 | Canola | cytosol, peroxisome, plastid | 15.71 | 4.2 |
| CDY06260 | Canola | plastid | 15.71 | 4.2 |
| CDX97899 | Canola | peroxisome | 15.71 | 4.2 |
| CDY45433 | Canola | cytosol | 14.29 | 4.08 |
| CDX97890 | Canola | cytosol | 18.57 | 3.83 |
| CDY65683 | Canola | cytosol, mitochondrion | 21.43 | 3.76 |
| CDY31767 | Canola | plastid | 22.86 | 2.84 |
| CDY05152 | Canola | cytosol | 8.57 | 2.51 |
| CDY50145 | Canola | plastid | 22.86 | 2.21 |
| CDY04975 | Canola | mitochondrion | 2.86 | 1.79 |
| CDY35231 | Canola | peroxisome | 2.86 | 1.61 |
| CDY45441 | Canola | cytosol | 0.0 | 0.0 |
| CDY35991 | Canola | plastid | 0.0 | 0.0 |
| CDY16436 | Canola | endoplasmic reticulum, vacuole | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY05153 | EnsemblPlantsGene:GSBRNA2T00119950001 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR43348 | PANTHER:PTHR43348:SF4 |
| ProteinID:CDY05153 | ProteinID:CDY05153.1 | SUPFAM:SSF51735 | UniParc:UPI0004EE0EEC | MapMan:35.1 | : |
Description
BnaC05g46500D
Coordinates
chrLK031960:-:64848..65279
Molecular Weight (calculated)
7536.0 Da
IEP (calculated)
9.309
GRAVY (calculated)
-0.560
Length
70 amino acids
Sequence
(BLAST)
(BLAST)
1: MASGFPPQKQ ETQPGVQHAM DPTPQFSSPN YKPSNKLHGK VALVTGGDSG IGRAVCHCYA LKERVWLSPT
001: MASGFPPQKQ ETQPGIQHVM EPTPEFSSSN YKPSNKLHGK VALVTGGDSG IGKAVCHCYA LEGASVAFTY VKGREDKDAE ETLRLLHEVK TREAKEPIMI
101: ATDLGFEENC KRVVEEVVNS FGRIDVLVNC AAEQHEVSIE DIDEARLERV FRTNIFSQFF LVKYALKHMK EGSSIINTTS VVAYAGNSSL LEYTATKGAI
201: VSFTRGLALQ LAPKGIRVNG VAPGPVWTPL IPASFSEEAI KQFGSETPMK RAAQPVEVAP SYVFLACNHC SSYYTGQILH PNGGLIVNA
101: ATDLGFEENC KRVVEEVVNS FGRIDVLVNC AAEQHEVSIE DIDEARLERV FRTNIFSQFF LVKYALKHMK EGSSIINTTS VVAYAGNSSL LEYTATKGAI
201: VSFTRGLALQ LAPKGIRVNG VAPGPVWTPL IPASFSEEAI KQFGSETPMK RAAQPVEVAP SYVFLACNHC SSYYTGQILH PNGGLIVNA
Arabidopsis Description
Glucose and ribitol dehydrogenase homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9MA93]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.