Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G29330.1 | CDX83307 | AT2G29320.1 | 21798944 |
| AT2G29330.1 | CDX95751 | AT2G29320.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018400.1-P | Field mustard | cytosol, nucleus, plastid | 99.62 | 99.62 |
| CDY40183 | Canola | plastid | 96.18 | 96.18 |
| AT2G29330.1 | Thale cress | cytosol, peroxisome, plastid | 82.82 | 83.46 |
| CDY40175 | Canola | plasma membrane | 81.3 | 81.3 |
| CDY31772 | Canola | cytosol, peroxisome, plastid | 80.15 | 80.15 |
| CDY40171 | Canola | cytosol | 67.56 | 80.09 |
| CDY45438 | Canola | cytosol | 79.01 | 79.01 |
| CDY45432 | Canola | cytosol | 79.01 | 79.01 |
| CDY40188 | Canola | cytosol, peroxisome, plasma membrane | 79.01 | 79.01 |
| CDY40179 | Canola | cytosol, peroxisome, plastid | 78.63 | 78.93 |
| CDY31774 | Canola | cytosol | 70.61 | 78.72 |
| CDY62820 | Canola | cytosol, endoplasmic reticulum, peroxisome | 78.63 | 78.33 |
| CDX97895 | Canola | cytosol | 70.23 | 78.3 |
| CDY45441 | Canola | cytosol | 66.79 | 78.12 |
| CDY40165 | Canola | plastid | 77.86 | 77.86 |
| CDX97899 | Canola | peroxisome | 77.86 | 77.86 |
| CDY31773 | Canola | plastid | 77.48 | 77.48 |
| CDY31768 | Canola | cytosol, peroxisome, plastid | 77.48 | 77.48 |
| CDY40186 | Canola | cytosol | 61.07 | 77.29 |
| CDX97897 | Canola | cytosol, extracellular | 67.94 | 77.06 |
| CDX83307 | Canola | peroxisome | 76.34 | 76.34 |
| CDY40185 | Canola | plastid | 76.34 | 76.34 |
| CDX83306 | Canola | plastid | 75.95 | 75.95 |
| CDX95751 | Canola | peroxisome | 75.19 | 75.19 |
| CDY45435 | Canola | cytosol, peroxisome, plastid | 74.81 | 74.81 |
| CDX95753 | Canola | cytosol, peroxisome, plastid | 74.43 | 74.43 |
| CDY40182 | Canola | cytosol, peroxisome, plastid | 74.05 | 74.05 |
| CDY31770 | Canola | plastid | 64.5 | 72.84 |
| CDY45433 | Canola | cytosol | 67.56 | 72.24 |
| CDX86486 | Canola | cytosol, peroxisome, plastid | 69.85 | 69.85 |
| CDY06706 | Canola | mitochondrion | 70.61 | 69.55 |
| CDY10276 | Canola | mitochondrion | 70.61 | 69.55 |
| CDY14610 | Canola | mitochondrion | 70.61 | 69.55 |
| CDY68057 | Canola | cytosol | 68.7 | 68.7 |
| CDX86485 | Canola | cytosol, peroxisome, plastid | 68.32 | 68.32 |
| CDY16437 | Canola | mitochondrion | 68.7 | 67.67 |
| CDY09917 | Canola | cytosol | 67.56 | 67.56 |
| CDY52942 | Canola | mitochondrion | 67.56 | 66.54 |
| CDY40177 | Canola | cytosol | 70.23 | 66.43 |
| CDY06260 | Canola | plastid | 66.03 | 66.03 |
| CDX95752 | Canola | cytosol | 59.92 | 65.97 |
| VIT_06s0004g05440.t01 | Wine grape | cytosol | 20.61 | 65.85 |
| CDY64214 | Canola | mitochondrion | 42.75 | 65.5 |
| CDY16436 | Canola | endoplasmic reticulum, vacuole | 25.95 | 64.76 |
| CDX98899 | Canola | peroxisome | 64.12 | 64.12 |
| CDY04977 | Canola | peroxisome | 64.12 | 63.88 |
| CDX97893 | Canola | mitochondrion | 66.03 | 63.84 |
| CDY31776 | Canola | cytosol, peroxisome, plastid | 66.03 | 63.84 |
| CDY09823 | Canola | peroxisome | 66.03 | 63.84 |
| CDY09824 | Canola | mitochondrion | 66.03 | 63.84 |
| VIT_06s0004g05320.t01 | Wine grape | endoplasmic reticulum, peroxisome, plastid | 61.07 | 63.49 |
| CDY14094 | Canola | peroxisome | 63.36 | 63.12 |
| VIT_06s0004g05400.t01 | Wine grape | cytosol | 26.72 | 63.06 |
| CDX70101 | Canola | peroxisome | 62.21 | 62.21 |
| KRH24731 | Soybean | nucleus | 63.36 | 62.17 |
| VIT_06s0004g05370.t01 | Wine grape | peroxisome | 59.54 | 61.9 |
| VIT_06s0004g05380.t01 | Wine grape | plastid | 63.74 | 61.85 |
| Solyc03g096650.1.1 | Tomato | cytosol | 20.99 | 61.8 |
| CDY04975 | Canola | mitochondrion | 26.34 | 61.61 |
| VIT_06s0004g05430.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 62.21 | 60.37 |
| VIT_06s0004g05310.t01 | Wine grape | cytosol | 25.95 | 60.18 |
| KRH24733 | Soybean | nucleus | 60.69 | 60.0 |
| KRH24732 | Soybean | cytosol, endoplasmic reticulum, plastid | 61.07 | 59.48 |
| VIT_06s0004g05330.t01 | Wine grape | peroxisome | 57.63 | 59.45 |
| CDY51372 | Canola | plastid | 62.21 | 58.42 |
| CDY35991 | Canola | plastid | 27.48 | 58.06 |
| CDX95750 | Canola | cytosol | 60.69 | 58.03 |
| CDY72061 | Canola | cytosol | 24.05 | 57.8 |
| VIT_06s0004g05360.t01 | Wine grape | cytosol, mitochondrion, plastid | 51.53 | 56.25 |
| KRH29740 | Soybean | cytosol | 20.23 | 54.08 |
| VIT_06s0004g05390.t01 | Wine grape | cytosol, plasma membrane, plastid | 50.38 | 53.66 |
| VIT_06s0004g05450.t01 | Wine grape | plasma membrane | 35.11 | 51.11 |
| CDX98898 | Canola | cytosol, peroxisome, plasma membrane | 58.02 | 49.03 |
| CDX97890 | Canola | cytosol | 62.98 | 48.67 |
| GSMUA_Achr5P04570_001 | Banana | cytosol | 23.28 | 48.03 |
| CDY65683 | Canola | cytosol, mitochondrion | 69.85 | 45.86 |
| CDY35231 | Canola | peroxisome | 18.32 | 38.71 |
| CDY31767 | Canola | plastid | 75.19 | 34.99 |
| CDX94534 | Canola | peroxisome | 32.06 | 32.94 |
| CDY16690 | Canola | peroxisome | 32.06 | 32.94 |
| CDY27447 | Canola | cytosol, mitochondrion, peroxisome | 30.15 | 30.62 |
| CDX76382 | Canola | cytosol, mitochondrion, peroxisome | 29.77 | 30.35 |
| CDY50145 | Canola | plastid | 77.86 | 28.18 |
| CDY43488 | Canola | cytosol | 28.24 | 25.61 |
| CDY27781 | Canola | cytosol, peroxisome, plastid | 27.48 | 24.91 |
| CDY17559 | Canola | cytoskeleton, nucleus, peroxisome | 27.1 | 24.74 |
| CDY05152 | Canola | cytosol | 21.37 | 23.43 |
| CDY08402 | Canola | cytosol | 24.05 | 21.43 |
| CDX73802 | Canola | peroxisome | 23.66 | 20.81 |
| CDY00799 | Canola | peroxisome | 23.66 | 20.81 |
| CDY05153 | Canola | cytosol, nucleus, plastid | 4.96 | 18.57 |
Protein Annotations
| EnsemblPlants:CDY45434 | EnsemblPlantsGene:GSBRNA2T00082047001 | Gene3D:3.40.50.720 | GO:A0A078I7Q4 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
| ncoils:Coil | PANTHER:PTHR42898 | PANTHER:PTHR42898:SF7 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 |
| ProteinID:CDY45434 | ProteinID:CDY45434.1 | SEG:seg | SUPFAM:SSF51735 | UniParc:UPI0004EEC3F5 | UniProt:A0A078I7Q4 |
| MapMan:50.1.1 | : | : | : | : | : |
Description
BnaA05g12670DBnaA05g12670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I7Q4]
Coordinates
chrLK032625:+:25107..26512
Molecular Weight (calculated)
27913.3 Da
IEP (calculated)
6.758
GRAVY (calculated)
0.066
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKRWSLKGM TALVTGGASG IGHAIVEELA GFGCKVHACD LSETLLNQSL CEWKKKGFQV SGSVCDVSCR SEREKLMQTV STMFNGKLNI LVNNVGSARV
101: KPTTEYLEDD FSFHISTNLE SAYHLSQLSH PFLKASGSGS IVFISSVAGV VSIDCGSMYG LTKGALNQLA RNLACEWAKD GIRANAVAPN FIYTALAQPF
201: LDDAGFNKSL STRTPLGRPG EPEEVASLVA FLCLPAASYI TGQSICVDGG LTVNGFSYQP HA
101: KPTTEYLEDD FSFHISTNLE SAYHLSQLSH PFLKASGSGS IVFISSVAGV VSIDCGSMYG LTKGALNQLA RNLACEWAKD GIRANAVAPN FIYTALAQPF
201: LDDAGFNKSL STRTPLGRPG EPEEVASLVA FLCLPAASYI TGQSICVDGG LTVNGFSYQP HA
001: MDKRWSLQGL TALVTGGASG IGHAIVEELA GFGAKIHVCD ISKTLLNQSL SEWEKKGFQV SGSVCDASNR LERETLMQTV TTIFDGKLNI LVNNVGTIRT
101: KPTIEYEAED FSFLISTNLE SAYHLSQLSH PLLKASGNGI ITFISSAAGI VSFDAASIYG LTKGALNQLA RNLACEWAKD GIRANAVAPN FITTALAKPF
201: LEDAGFNEIL SSRTPLGRAG EPREVASLVA FLCLPAASYI TGQTICVDGG LTVNGFSYQP
101: KPTIEYEAED FSFLISTNLE SAYHLSQLSH PLLKASGNGI ITFISSAAGI VSFDAASIYG LTKGALNQLA RNLACEWAKD GIRANAVAPN FITTALAKPF
201: LEDAGFNEIL SSRTPLGRAG EPREVASLVA FLCLPAASYI TGQTICVDGG LTVNGFSYQP
Arabidopsis Description
TRITropinone reductase homolog At2g29330 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW16]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.