Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039967.1-P | Field mustard | plastid | 97.71 | 97.71 |
| CDY31773 | Canola | plastid | 89.31 | 89.31 |
| CDX97897 | Canola | cytosol, extracellular | 77.48 | 87.88 |
| CDY31772 | Canola | cytosol, peroxisome, plastid | 87.02 | 87.02 |
| CDX97899 | Canola | peroxisome | 86.64 | 86.64 |
| CDY40188 | Canola | cytosol, peroxisome, plasma membrane | 85.5 | 85.5 |
| CDX83307 | Canola | peroxisome | 85.11 | 85.11 |
| CDX95751 | Canola | peroxisome | 84.35 | 84.35 |
| CDY40186 | Canola | cytosol | 66.41 | 84.06 |
| CDY45432 | Canola | cytosol | 83.97 | 83.97 |
| CDX83306 | Canola | plastid | 82.44 | 82.44 |
| CDY40182 | Canola | cytosol, peroxisome, plastid | 81.68 | 81.68 |
| CDX95753 | Canola | cytosol, peroxisome, plastid | 81.3 | 81.3 |
| CDY45435 | Canola | cytosol, peroxisome, plastid | 80.53 | 80.53 |
| CDY40185 | Canola | plastid | 80.53 | 80.53 |
| CDY40175 | Canola | plasma membrane | 79.77 | 79.77 |
| CDY40183 | Canola | plastid | 78.24 | 78.24 |
| CDY31774 | Canola | cytosol | 69.85 | 77.87 |
| CDX97895 | Canola | cytosol | 69.85 | 77.87 |
| CDY45438 | Canola | cytosol | 77.48 | 77.48 |
| CDY45434 | Canola | cytosol, nucleus, plastid | 77.48 | 77.48 |
| CDY40179 | Canola | cytosol, peroxisome, plastid | 77.1 | 77.39 |
| CDY62820 | Canola | cytosol, endoplasmic reticulum, peroxisome | 77.1 | 76.81 |
| CDY45433 | Canola | cytosol | 71.76 | 76.73 |
| CDY45441 | Canola | cytosol | 65.27 | 76.34 |
| CDY40165 | Canola | plastid | 76.34 | 76.34 |
| CDY40171 | Canola | cytosol | 63.74 | 75.57 |
| CDY31770 | Canola | plastid | 63.74 | 71.98 |
| CDX86486 | Canola | cytosol, peroxisome, plastid | 71.76 | 71.76 |
| CDX95752 | Canola | cytosol | 64.12 | 70.59 |
| CDY09917 | Canola | cytosol | 70.23 | 70.23 |
| CDY68057 | Canola | cytosol | 70.23 | 70.23 |
| CDY06260 | Canola | plastid | 68.7 | 68.7 |
| CDY14610 | Canola | mitochondrion | 68.7 | 67.67 |
| CDY10276 | Canola | mitochondrion | 68.7 | 67.67 |
| CDY52942 | Canola | mitochondrion | 68.7 | 67.67 |
| CDX86485 | Canola | cytosol, peroxisome, plastid | 67.56 | 67.56 |
| CDY06706 | Canola | mitochondrion | 67.94 | 66.92 |
| CDY16437 | Canola | mitochondrion | 67.18 | 66.17 |
| CDY40177 | Canola | cytosol | 69.08 | 65.34 |
| CDY64214 | Canola | mitochondrion | 41.6 | 63.74 |
| CDX98899 | Canola | peroxisome | 62.98 | 62.98 |
| CDY04977 | Canola | peroxisome | 62.98 | 62.74 |
| CDY04975 | Canola | mitochondrion | 26.72 | 62.5 |
| CDY14094 | Canola | peroxisome | 62.21 | 61.98 |
| CDY16436 | Canola | endoplasmic reticulum, vacuole | 24.81 | 61.9 |
| Solyc03g096650.1.1 | Tomato | cytosol | 20.99 | 61.8 |
| VIT_06s0004g05320.t01 | Wine grape | endoplasmic reticulum, peroxisome, plastid | 58.78 | 61.11 |
| CDX70101 | Canola | peroxisome | 61.07 | 61.07 |
| VIT_06s0004g05370.t01 | Wine grape | peroxisome | 58.02 | 60.32 |
| CDY31776 | Canola | cytosol, peroxisome, plastid | 61.83 | 59.78 |
| KRH24733 | Soybean | nucleus | 60.31 | 59.62 |
| KRH24731 | Soybean | nucleus | 60.69 | 59.55 |
| CDY09823 | Canola | peroxisome | 61.45 | 59.41 |
| CDX97893 | Canola | mitochondrion | 61.45 | 59.41 |
| CDY09824 | Canola | mitochondrion | 61.45 | 59.41 |
| VIT_06s0004g05380.t01 | Wine grape | plastid | 61.07 | 59.26 |
| CDX95750 | Canola | cytosol | 61.07 | 58.39 |
| VIT_06s0004g05430.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 59.92 | 58.15 |
| KRH24732 | Soybean | cytosol, endoplasmic reticulum, plastid | 58.4 | 56.88 |
| VIT_06s0004g05400.t01 | Wine grape | cytosol | 24.05 | 56.76 |
| VIT_06s0004g05330.t01 | Wine grape | peroxisome | 54.96 | 56.69 |
| VIT_06s0004g05440.t01 | Wine grape | cytosol | 17.56 | 56.1 |
| VIT_06s0004g05310.t01 | Wine grape | cytosol | 24.05 | 55.75 |
| CDY51372 | Canola | plastid | 59.16 | 55.56 |
| CDY35991 | Canola | plastid | 25.95 | 54.84 |
| VIT_06s0004g05360.t01 | Wine grape | cytosol, mitochondrion, plastid | 48.85 | 53.33 |
| CDY72061 | Canola | cytosol | 22.14 | 53.21 |
| VIT_06s0004g05390.t01 | Wine grape | cytosol, plasma membrane, plastid | 47.71 | 50.81 |
| KRH29740 | Soybean | cytosol | 18.7 | 50.0 |
| VIT_06s0004g05450.t01 | Wine grape | plasma membrane | 34.35 | 50.0 |
| CDX98898 | Canola | cytosol, peroxisome, plasma membrane | 57.25 | 48.39 |
| CDX97890 | Canola | cytosol | 59.54 | 46.02 |
| GSMUA_Achr5P04570_001 | Banana | cytosol | 21.76 | 44.88 |
| CDY65683 | Canola | cytosol, mitochondrion | 67.18 | 44.11 |
| CDY35231 | Canola | peroxisome | 17.18 | 36.29 |
| CDY50145 | Canola | plastid | 96.18 | 34.81 |
| CDY31767 | Canola | plastid | 73.66 | 34.28 |
| CDY16690 | Canola | peroxisome | 29.01 | 29.8 |
| CDX94534 | Canola | peroxisome | 28.63 | 29.41 |
| CDX76382 | Canola | cytosol, mitochondrion, peroxisome | 28.24 | 28.79 |
| CDY27447 | Canola | cytosol, mitochondrion, peroxisome | 28.24 | 28.68 |
| CDY43488 | Canola | cytosol | 27.48 | 24.91 |
| CDY27781 | Canola | cytosol, peroxisome, plastid | 27.48 | 24.91 |
| CDY17559 | Canola | cytoskeleton, nucleus, peroxisome | 26.72 | 24.39 |
| CDY05152 | Canola | cytosol | 21.37 | 23.43 |
| CDY08402 | Canola | cytosol | 25.57 | 22.79 |
| CDY00799 | Canola | peroxisome | 25.19 | 22.15 |
| CDX73802 | Canola | peroxisome | 25.19 | 22.15 |
| CDY05153 | Canola | cytosol, nucleus, plastid | 4.96 | 18.57 |
Protein Annotations
| EnsemblPlants:CDY31768 | EnsemblPlantsGene:GSBRNA2T00050420001 | Gene3D:3.40.50.720 | GO:A0A078H4K6 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
| PANTHER:PTHR42898 | PANTHER:PTHR42898:SF7 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ProteinID:CDY31768 |
| ProteinID:CDY31768.1 | SUPFAM:SSF51735 | UniParc:UPI0004EDED0B | UniProt:A0A078H4K6 | MapMan:50.1.1 | : |
Description
BnaA04g17040DBnaA04g17040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H4K6]
Coordinates
chrLK032278:+:388205..389414
Molecular Weight (calculated)
27991.5 Da
IEP (calculated)
6.501
GRAVY (calculated)
0.174
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKRWSLQGM TALVTGGASG IGYAIVEELA SFGARIHICD ISKTLLNQSL SEWEKKGFQV SGSVCDVTSH PERETLIQNV SSLFDGKLNI FVNNVGVLRG
101: KPTIEYGADD FAFHISTNLE SAYHICQLSH PLLKASGYGS IVFLSSVAGV VFTSGGSIYS LTKGALNQLA RNLACEWAKD SIRANAVAPN IIKTPLALPY
201: LEDVGFREGL FGRTPLGRAG EPHEVASLVV FLCLPAASYI TGQTICVDGG LTINGFSYQP QA
101: KPTIEYGADD FAFHISTNLE SAYHICQLSH PLLKASGYGS IVFLSSVAGV VFTSGGSIYS LTKGALNQLA RNLACEWAKD SIRANAVAPN IIKTPLALPY
201: LEDVGFREGL FGRTPLGRAG EPHEVASLVV FLCLPAASYI TGQTICVDGG LTINGFSYQP QA
001: MVTRKMDKRL WSLQGMTALV TGAASGIGYA IVEELAGFGA KIHICDISKT LLNQSLSEWE NKGFQVSGSV CDVTSHPERE KLMQTVSSIF DGKLNILVNN
101: VGVLRGKPTT EYVADDFTFH ISTNLEAAYH FCQLSHPLLK ASGYGSIVFL SSVAGVVSLI DCGSIYGLTK GALNQLARNL ACEWAKDGIR ANAVAPNVVK
201: TAQSQSFLED VSKKEGLLSR TPLGRVGEPN EVSSLVVFLC LPAASYITGQ TICVDGGLTV NGFSYQPHA
101: VGVLRGKPTT EYVADDFTFH ISTNLEAAYH FCQLSHPLLK ASGYGSIVFL SSVAGVVSLI DCGSIYGLTK GALNQLARNL ACEWAKDGIR ANAVAPNVVK
201: TAQSQSFLED VSKKEGLLSR TPLGRVGEPN EVSSLVVFLC LPAASYITGQ TICVDGGLTV NGFSYQPHA
Arabidopsis Description
Tropinone reductase homolog At2g29320 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW15]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.