Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 2
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05153 | Canola | cytosol, nucleus, plastid | 22.49 | 92.86 |
| AT3G05260.1 | Thale cress | cytosol | 90.31 | 90.31 |
| CDY05152 | Canola | cytosol | 63.67 | 76.99 |
| CDY17559 | Canola | cytoskeleton, nucleus, peroxisome | 76.12 | 76.66 |
| CDY43488 | Canola | cytosol | 76.12 | 76.12 |
| PGSC0003DMT400073652 | Potato | cytosol, peroxisome, plastid | 74.39 | 73.38 |
| KRG96884 | Soybean | cytosol | 70.93 | 69.49 |
| KRH68573 | Soybean | cytosol | 65.4 | 68.73 |
| KRH68572 | Soybean | cytosol | 69.9 | 67.33 |
| GSMUA_Achr4P24690_001 | Banana | cytosol | 64.36 | 62.42 |
| Solyc01g098850.2.1 | Tomato | extracellular | 73.36 | 62.35 |
| OQU77380 | Sorghum | mitochondrion | 68.17 | 60.24 |
| VIT_14s0128g00340.t01 | Wine grape | plastid | 69.9 | 59.24 |
| GSMUA_Achr4P29030_001 | Banana | cytosol | 58.82 | 58.22 |
| TraesCS1A01G083800.1 | Wheat | plastid | 69.2 | 57.64 |
| TraesCS1B01G101100.1 | Wheat | plastid | 69.2 | 57.47 |
| TraesCS1D01G084900.1 | Wheat | mitochondrion, plastid | 68.51 | 57.06 |
| Os05t0140800-01 | Rice | plastid | 65.4 | 51.78 |
| Zm00001d006796_P001 | Maize | extracellular | 63.67 | 51.4 |
| HORVU1Hr1G018140.5 | Barley | extracellular, mitochondrion | 68.86 | 49.87 |
| CDY16436 | Canola | endoplasmic reticulum, vacuole | 12.11 | 33.33 |
| CDY35991 | Canola | plastid | 13.49 | 31.45 |
| CDY35231 | Canola | peroxisome | 13.49 | 31.45 |
| CDX94534 | Canola | peroxisome | 26.99 | 30.59 |
| CDY16690 | Canola | peroxisome | 26.64 | 30.2 |
| CDY40186 | Canola | cytosol | 21.45 | 29.95 |
| CDY51372 | Canola | plastid | 28.72 | 29.75 |
| CDY06706 | Canola | mitochondrion | 27.34 | 29.7 |
| CDY04977 | Canola | peroxisome | 26.99 | 29.66 |
| CDY68057 | Canola | cytosol | 26.64 | 29.39 |
| CDX98899 | Canola | peroxisome | 26.64 | 29.39 |
| CDX86486 | Canola | cytosol, peroxisome, plastid | 26.64 | 29.39 |
| CDY14094 | Canola | peroxisome | 26.64 | 29.28 |
| CDX70101 | Canola | peroxisome | 26.3 | 29.01 |
| CDY14610 | Canola | mitochondrion | 26.64 | 28.95 |
| CDY10276 | Canola | mitochondrion | 26.64 | 28.95 |
| CDX76382 | Canola | cytosol, mitochondrion, peroxisome | 25.61 | 28.79 |
| CDY27447 | Canola | cytosol, mitochondrion, peroxisome | 25.61 | 28.68 |
| CDY09917 | Canola | cytosol | 25.95 | 28.63 |
| CDY45432 | Canola | cytosol | 25.95 | 28.63 |
| CDX86485 | Canola | cytosol, peroxisome, plastid | 25.95 | 28.63 |
| CDX97897 | Canola | cytosol, extracellular | 22.84 | 28.57 |
| CDY52942 | Canola | mitochondrion | 26.3 | 28.57 |
| CDY04975 | Canola | mitochondrion | 11.07 | 28.57 |
| CDY31776 | Canola | cytosol, peroxisome, plastid | 26.64 | 28.41 |
| CDY09824 | Canola | mitochondrion | 26.64 | 28.41 |
| CDY09823 | Canola | peroxisome | 26.64 | 28.41 |
| CDX97893 | Canola | mitochondrion | 26.64 | 28.41 |
| CDY40188 | Canola | cytosol, peroxisome, plasma membrane | 25.61 | 28.24 |
| CDY06260 | Canola | plastid | 25.61 | 28.24 |
| CDY40182 | Canola | cytosol, peroxisome, plastid | 25.61 | 28.24 |
| CDY40165 | Canola | plastid | 25.61 | 28.24 |
| CDX83306 | Canola | plastid | 25.61 | 28.24 |
| CDY62820 | Canola | cytosol, endoplasmic reticulum, peroxisome | 25.61 | 28.14 |
| CDX95753 | Canola | cytosol, peroxisome, plastid | 25.26 | 27.86 |
| CDX95751 | Canola | peroxisome | 25.26 | 27.86 |
| CDY31773 | Canola | plastid | 25.26 | 27.86 |
| CDY16437 | Canola | mitochondrion | 25.61 | 27.82 |
| CDY40179 | Canola | cytosol, peroxisome, plastid | 24.91 | 27.59 |
| CDY45434 | Canola | cytosol, nucleus, plastid | 24.91 | 27.48 |
| CDX83307 | Canola | peroxisome | 24.91 | 27.48 |
| CDY45438 | Canola | cytosol | 24.91 | 27.48 |
| CDY45435 | Canola | cytosol, peroxisome, plastid | 24.91 | 27.48 |
| CDY31768 | Canola | cytosol, peroxisome, plastid | 24.91 | 27.48 |
| CDY40183 | Canola | plastid | 24.91 | 27.48 |
| CDY40175 | Canola | plasma membrane | 24.91 | 27.48 |
| CDY31774 | Canola | cytosol | 21.8 | 26.81 |
| CDX97895 | Canola | cytosol | 21.8 | 26.81 |
| CDX73802 | Canola | peroxisome | 27.34 | 26.51 |
| CDY00799 | Canola | peroxisome | 27.34 | 26.51 |
| CDY45441 | Canola | cytosol | 20.42 | 26.34 |
| CDY31772 | Canola | cytosol, peroxisome, plastid | 23.88 | 26.34 |
| CDX95750 | Canola | cytosol | 24.91 | 26.28 |
| CDX97899 | Canola | peroxisome | 23.53 | 25.95 |
| CDY31770 | Canola | plastid | 20.76 | 25.86 |
| CDY08402 | Canola | cytosol | 25.95 | 25.51 |
| CDY45433 | Canola | cytosol | 21.11 | 24.9 |
| CDY40185 | Canola | plastid | 22.49 | 24.81 |
| CDX95752 | Canola | cytosol | 20.07 | 24.37 |
| CDX97890 | Canola | cytosol | 28.37 | 24.19 |
| CDY72061 | Canola | cytosol | 9.0 | 23.85 |
| CDY40171 | Canola | cytosol | 17.99 | 23.53 |
| CDX98898 | Canola | cytosol, peroxisome, plasma membrane | 24.91 | 23.23 |
| CDY40177 | Canola | cytosol | 22.15 | 23.1 |
| CDY64214 | Canola | mitochondrion | 13.49 | 22.81 |
| CDY65683 | Canola | cytosol, mitochondrion | 25.26 | 18.3 |
| CDY31767 | Canola | plastid | 28.37 | 14.56 |
| CDY50145 | Canola | plastid | 25.95 | 10.36 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | GO:A0A078GQT4 | UniProt:A0A078GQT4 | EnsemblPlants:CDY27781 | ProteinID:CDY27781 |
| ProteinID:CDY27781.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00038587001 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 |
| ScanProsite:PS00061 | PANTHER:PTHR43348 | PANTHER:PTHR43348:SF4 | InterPro:SDR_fam | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS |
| UniParc:UPI0004EF1A04 | : | : | : | : | : |
Description
BnaA05g31900DBnaA05g31900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GQT4]
Coordinates
chrLK032209:+:390186..392422
Molecular Weight (calculated)
31264.1 Da
IEP (calculated)
6.508
GRAVY (calculated)
-0.159
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGFPPQKQ ETQPGVQHAM DPSPQFSSPN YKPSNKLHGK VALVTGGDSG IGRAVCHCYV LEGASVAFTY VKGREDKDAD ETLRLLHEAK TKDAKDPIMI
101: ATDLGFEENC KRTVDEVVNA FGRIDVLVNC AAEQHEVSID EIEEARLERV FRTNIFSQFF LAKYALKHMK EGSSIINTTS VVAYAGSSSL LEYASTKGAI
201: VSFTRALALQ LASKGIRVNG VAPGPVWTPL ITASFSEEAI KQFGSETPMK RAAQPVEVAP SYVFLACEHC SSYYTGQILH PNGGSIVNA
101: ATDLGFEENC KRTVDEVVNA FGRIDVLVNC AAEQHEVSID EIEEARLERV FRTNIFSQFF LAKYALKHMK EGSSIINTTS VVAYAGSSSL LEYASTKGAI
201: VSFTRALALQ LASKGIRVNG VAPGPVWTPL ITASFSEEAI KQFGSETPMK RAAQPVEVAP SYVFLACEHC SSYYTGQILH PNGGSIVNA
001: MASGFPPQKQ ETQPGIQHVM EPTPEFSSSN YKPSNKLHGK VALVTGGDSG IGKAVCHCYA LEGASVAFTY VKGREDKDAE ETLRLLHEVK TREAKEPIMI
101: ATDLGFEENC KRVVEEVVNS FGRIDVLVNC AAEQHEVSIE DIDEARLERV FRTNIFSQFF LVKYALKHMK EGSSIINTTS VVAYAGNSSL LEYTATKGAI
201: VSFTRGLALQ LAPKGIRVNG VAPGPVWTPL IPASFSEEAI KQFGSETPMK RAAQPVEVAP SYVFLACNHC SSYYTGQILH PNGGLIVNA
101: ATDLGFEENC KRVVEEVVNS FGRIDVLVNC AAEQHEVSIE DIDEARLERV FRTNIFSQFF LVKYALKHMK EGSSIINTTS VVAYAGNSSL LEYTATKGAI
201: VSFTRGLALQ LAPKGIRVNG VAPGPVWTPL IPASFSEEAI KQFGSETPMK RAAQPVEVAP SYVFLACNHC SSYYTGQILH PNGGLIVNA
Arabidopsis Description
Glucose and ribitol dehydrogenase homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9MA93]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.