Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P24690_001 | Banana | cytosol | 71.23 | 69.8 |
| PGSC0003DMT400073652 | Potato | cytosol, peroxisome, plastid | 65.41 | 65.19 |
| KRG92837 | Soybean | endoplasmic reticulum, nucleus | 64.73 | 64.51 |
| CDY17559 | Canola | cytoskeleton, nucleus, peroxisome | 62.33 | 63.41 |
| Bra021324.1-P | Field mustard | cytosol | 62.67 | 63.32 |
| KRH33956 | Soybean | endoplasmic reticulum | 63.36 | 63.14 |
| CDY43488 | Canola | cytosol | 62.33 | 62.98 |
| KRH68572 | Soybean | cytosol | 61.64 | 60.0 |
| AT3G05260.1 | Thale cress | cytosol | 58.22 | 58.82 |
| CDY27781 | Canola | cytosol, peroxisome, plastid | 58.22 | 58.82 |
| KRH68573 | Soybean | cytosol | 54.45 | 57.82 |
| KRG96884 | Soybean | cytosol | 58.22 | 57.63 |
| VIT_14s0128g00340.t01 | Wine grape | plastid | 65.41 | 56.01 |
| Solyc01g098850.2.1 | Tomato | extracellular | 65.07 | 55.88 |
| OQU77380 | Sorghum | mitochondrion | 61.64 | 55.05 |
| TraesCS1A01G083800.1 | Wheat | plastid | 64.04 | 53.89 |
| KRH68615 | Soybean | cytosol, nucleus, plastid | 40.75 | 53.85 |
| AT1G54870.2 | Thale cress | plastid | 61.99 | 53.71 |
| TraesCS1D01G084900.1 | Wheat | mitochondrion, plastid | 63.7 | 53.6 |
| TraesCS1B01G101100.1 | Wheat | plastid | 63.01 | 52.87 |
| Os05t0140800-01 | Rice | plastid | 64.04 | 51.23 |
| Zm00001d006796_P001 | Maize | extracellular | 62.67 | 51.12 |
| HORVU1Hr1G018140.5 | Barley | extracellular, mitochondrion | 63.7 | 46.62 |
| CDY05152 | Canola | cytosol | 35.96 | 43.93 |
| GSMUA_Achr9P03470_001 | Banana | cytosol | 25.34 | 27.51 |
| GSMUA_Achr9P03430_001 | Banana | cytosol, mitochondrion, plastid | 23.97 | 26.72 |
| GSMUA_Achr9P03440_001 | Banana | cytosol | 23.29 | 25.09 |
| GSMUA_Achr11P... | Banana | cytosol | 22.6 | 24.63 |
| GSMUA_Achr10P... | Banana | cytosol | 22.6 | 24.35 |
| GSMUA_Achr3P01030_001 | Banana | mitochondrion | 18.15 | 23.98 |
| GSMUA_Achr3P01040_001 | Banana | cytosol | 7.88 | 23.96 |
| GSMUA_Achr9P03420_001 | Banana | mitochondrion | 23.63 | 22.92 |
| GSMUA_Achr5P04570_001 | Banana | cytosol | 9.93 | 22.83 |
| GSMUA_Achr2P01480_001 | Banana | peroxisome | 22.6 | 22.22 |
| GSMUA_Achr5P04560_001 | Banana | cytosol | 26.03 | 22.03 |
| GSMUA_Achr3P23590_001 | Banana | peroxisome | 22.26 | 21.89 |
| GSMUA_Achr6P34030_001 | Banana | cytosol | 23.29 | 18.78 |
| GSMUA_Achr1P18200_001 | Banana | cytosol | 9.93 | 16.67 |
| GSMUA_Achr9P03450_001 | Banana | cytosol, nucleus, peroxisome | 26.03 | 16.14 |
| GSMUA_Achr10P... | Banana | cytosol | 23.97 | 12.99 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:GSMUA_Achr4G29030_001 | EnsemblPlants:GSMUA_Achr4P29030_001 | EnsemblPlants:GSMUA_Achr4T29030_001 | UniProt:M0ST15 |
| InterPro:NAD(P)-bd_dom_sf | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | PANTHER:PTHR43348 |
| PANTHER:PTHR43348:SF4 | InterPro:SDR_fam | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS | UniParc:UPI000296AA87 | SEG:seg |
Description
Glucose and ribitol dehydrogenase [Source:GMGC_GENE;Acc:GSMUA_Achr4G29030_001]
Coordinates
chr4:-:27190614..27191723
Molecular Weight (calculated)
31921.2 Da
IEP (calculated)
6.508
GRAVY (calculated)
-0.145
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGGQHLPP QTQELQPGKE HIMEPTPQPI SDEYKPANKL QALSLSLSLS LSCASGKVAL VTGGDSGIGR AVCYCFAQEG ATVAFTYVKS QEFKDANDTL
101: QMLRQIKKHD AKDPIAIPAE LGYEENCRKV VEEVVNAYGR IDILVNNAAE QYERSCITDI TEEQLERVFR TNIFSYMHVS KFVVKQMKAG GCIINTTSVN
201: AYKGHKTLLD YTSTKGAIVA FTRALALQLA DKGIRVPMGR AGQPYEIAPS YVFLASTPDS SYITGQVIHP NGTYSLPSPS ISLFELDYLV VL
101: QMLRQIKKHD AKDPIAIPAE LGYEENCRKV VEEVVNAYGR IDILVNNAAE QYERSCITDI TEEQLERVFR TNIFSYMHVS KFVVKQMKAG GCIINTTSVN
201: AYKGHKTLLD YTSTKGAIVA FTRALALQLA DKGIRVPMGR AGQPYEIAPS YVFLASTPDS SYITGQVIHP NGTYSLPSPS ISLFELDYLV VL
001: MAMNVLCRVF TSSRVLSSNV TFSFSQIPNN TKKPLLEKRR LSPRVCLRAM ASEKQKQHAQ PGKEHVMESS PQFSSSDYQP SNKLRGKVAL ITGGDSGIGR
101: AVGYCFASEG ATVAFTYVKG QEEKDAQETL QMLKEVKTSD SKEPIAIPTD LGFDENCKRV VDEVVNAFGR IDVLINNAAE QYESSTIEEI DEPRLERVFR
201: TNIFSYFFLT RHALKHMKEG SSIINTTSVN AYKGNASLLD YTATKGAIVA FTRGLALQLA EKGIRVNGVA PGPIWTPLIP ASFNEEKIKN FGSEVPMKRA
301: GQPIEVAPSY VFLACNHCSS YFTGQVLHPN GGAVVNA
101: AVGYCFASEG ATVAFTYVKG QEEKDAQETL QMLKEVKTSD SKEPIAIPTD LGFDENCKRV VDEVVNAFGR IDVLINNAAE QYESSTIEEI DEPRLERVFR
201: TNIFSYFFLT RHALKHMKEG SSIINTTSVN AYKGNASLLD YTATKGAIVA FTRGLALQLA EKGIRVNGVA PGPIWTPLIP ASFNEEKIKN FGSEVPMKRA
301: GQPIEVAPSY VFLACNHCSS YFTGQVLHPN GGAVVNA
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:TAIR;Acc:AT1G54870]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.