Factsheet for GSMUA_Achr3P01030_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
peroxisome 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35231	Canola	peroxisome	43.44	77.42
Bra029476.1-P	Field mustard	peroxisome	65.16	56.47
CDX94534	Canola	peroxisome	65.16	56.47
CDY16690	Canola	peroxisome	65.16	56.47
AT4G05530.1	Thale cress	peroxisome	64.25	55.91
HORVU0Hr1G012410.1	Barley	peroxisome	62.9	54.94
Solyc04g014670.2.1	Tomato	plastid	62.9	54.94
TraesCS5A01G164400.1	Wheat	peroxisome	62.9	54.94
Zm00001d019439_P001	Maize	extracellular	62.44	54.55
TraesCS5B01G161900.1	Wheat	peroxisome	62.44	54.55
TraesCS5D01G169300.1	Wheat	peroxisome	62.44	54.55
EER98384	Sorghum	peroxisome	62.44	54.55
EES19901	Sorghum	peroxisome	61.99	54.15
Os09t0133200-01	Rice	peroxisome	61.99	54.15
KRH02005	Soybean	endoplasmic reticulum, nucleus	61.09	53.57
PGSC0003DMT400034518	Potato	peroxisome	59.73	51.97
CDY27447	Canola	cytosol, mitochondrion, peroxisome	59.73	51.16
CDX76382	Canola	cytosol, mitochondrion, peroxisome	59.28	50.97
Bra020854.1-P	Field mustard	cytosol, mitochondrion, peroxisome	58.82	50.58
KRH11511	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	57.47	49.8
KRH36525	Soybean	endoplasmic reticulum	57.01	49.41
Zm00001d038897_P001	Maize	peroxisome	61.54	48.75
HORVU5Hr1G049670.1	Barley	peroxisome	40.72	35.57
GSMUA_Achr1P18200_001	Banana	cytosol	26.24	33.33
GSMUA_Achr9P03430_001	Banana	cytosol, mitochondrion, plastid	28.51	24.05
GSMUA_Achr9P03470_001	Banana	cytosol	28.05	23.05
GSMUA_Achr9P03440_001	Banana	cytosol	28.05	22.88
GSMUA_Achr10P...	Banana	cytosol	27.15	22.14
GSMUA_Achr11P...	Banana	cytosol	26.24	21.64
GSMUA_Achr4P24690_001	Banana	cytosol	27.6	20.47
GSMUA_Achr9P03420_001	Banana	mitochondrion	27.15	19.93
GSMUA_Achr2P01480_001	Banana	peroxisome	25.34	18.86
GSMUA_Achr3P23590_001	Banana	peroxisome	24.89	18.52
GSMUA_Achr4P29030_001	Banana	cytosol	23.98	18.15
GSMUA_Achr6P34030_001	Banana	cytosol	29.41	17.96
GSMUA_Achr3P01040_001	Banana	cytosol	7.69	17.71
GSMUA_Achr5P04560_001	Banana	cytosol	27.15	17.39
KRH70902	Soybean	cytosol	7.24	14.55
GSMUA_Achr9P03450_001	Banana	cytosol, nucleus, peroxisome	28.96	13.59
VIT_00s0516g00030.t01	Wine grape	cytosol, peroxisome	59.73	12.83
GSMUA_Achr5P04570_001	Banana	cytosol	7.24	12.6
GSMUA_Achr10P...	Banana	cytosol	27.6	11.32

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009653	GO:GO:0009719	GO:GO:0009987	GO:GO:0016049	GO:GO:0016491	GO:GO:0030154
GO:GO:0040007	GO:GO:0048767	GO:GO:0055114	GO:GO:0080024	GO:GO:0080026	EnsemblPlantsGene:GSMUA_Achr3G01030_001
EnsemblPlants:GSMUA_Achr3P01030_001	EnsemblPlants:GSMUA_Achr3T01030_001	UniProt:M0SAS1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF13561	PRINTS:PR00080
PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR43943	PANTHER:PTHR43943:SF2	InterPro:SDR_fam	SUPFAM:SSF51735
InterPro:Sc_DH/Rdtase_CS	UniParc:UPI0002953354	SEG:seg	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G01030_001]

Coordinates

chr3:-:765741..768904

Molecular Weight (calculated)

23830.7 Da

IEP (calculated)

9.442

GRAVY (calculated)

-0.047

Length

221 amino acids

Sequence
(BLAST)

001: MLSRILLPVR IRRSRRRCRG LVVSDTEEAT SHLRRPAREG SDGSGSSRES GKYGHIDIVV SNAAANPTVE NILDTKEPVL DKLWEINVKS SILILQDASS
101: YLRKGSSIIL ISSIAGYLPQ ASMAMYGVTK TALFGLTKAL AAEMSPDTRV NCIAPGFVPT HFADFLTKNA AIRKTIEDQT LLKRLGTTED MASAAAFLAS
201: DDSSYITGET LVVAGGMPSR L

Best Arabidopsis Sequence Match ( AT4G05530.1 )
(BLAST)

001: MEKKLPRRLE GKVAIVTAST QGIGFGITER FGLEGASVVV SSRKQANVDE AVAKLKSKGI DAYGIVCHVS NAQHRRNLVE KTVQKYGKID IVVCNAAANP
101: STDPILSSKE AVLDKLWEIN VKSSILLLQD MAPHLEKGSS VIFITSIAGF SPQGAMAMYG VTKTALLGLT KALAAEMAPD TRVNAVAPGF VPTHFASFIT
201: GSSEVREGIE EKTLLNRLGT TGDMAAAAAF LASDDSSYIT GETLVVAGGM PSRL

Arabidopsis Description

SDRAShort-chain dehydrogenase/reductase SDRA [Source:UniProtKB/Swiss-Prot;Acc:Q9S9W2]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.