CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 4
plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	peroxisome
MultiLoc:	peroxisome
Plant-mPloc:	plastid
PProwler:	peroxisome
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019439_P001	Maize	extracellular	95.26	95.26
EES19901	Sorghum	peroxisome	92.49	92.49
TraesCS5D01G169300.1	Wheat	peroxisome	89.72	89.72
TraesCS5A01G164400.1	Wheat	peroxisome	89.72	89.72
HORVU0Hr1G012410.1	Barley	peroxisome	89.72	89.72
TraesCS5B01G161900.1	Wheat	peroxisome	88.54	88.54
Os09t0133200-01	Rice	peroxisome	84.98	84.98
KRH02005	Soybean	endoplasmic reticulum, nucleus	74.31	74.6
CDY35231	Canola	peroxisome	34.78	70.97
CDY16690	Canola	peroxisome	71.15	70.59
Bra029476.1-P	Field mustard	peroxisome	71.15	70.59
CDX94534	Canola	peroxisome	71.15	70.59
GSMUA_Achr3P01040_001	Banana	cytosol	26.48	69.79
AT4G05530.1	Thale cress	peroxisome	69.57	69.29
PGSC0003DMT400034518	Potato	peroxisome	67.98	67.72
Solyc04g014670.2.1	Tomato	plastid	66.8	66.8
CDY27447	Canola	cytosol, mitochondrion, peroxisome	66.8	65.5
CDX76382	Canola	cytosol, mitochondrion, peroxisome	66.4	65.37
Bra020854.1-P	Field mustard	cytosol, mitochondrion, peroxisome	66.01	64.98
HORVU5Hr1G049670.1	Barley	peroxisome	64.82	64.82
KRH36525	Soybean	endoplasmic reticulum	65.22	64.71
KRH11511	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	64.82	64.31
GSMUA_Achr3P01030_001	Banana	mitochondrion	54.55	62.44
KRH70902	Soybean	cytosol	24.51	56.36
EES10199	Sorghum	mitochondrion	34.78	33.08
EES10195	Sorghum	mitochondrion	34.39	32.95
KXG29038	Sorghum	mitochondrion, plastid	33.99	32.58
OQU84126	Sorghum	peroxisome	35.18	31.34
EES10198	Sorghum	mitochondrion, plastid	32.81	30.63
KXG29040	Sorghum	cytosol, peroxisome, plastid	29.25	30.58
KXG34055	Sorghum	plastid	33.2	30.32
OQU92858	Sorghum	cytosol, peroxisome, plastid	34.39	28.25
EES08074	Sorghum	plastid	32.02	26.91
EES11416	Sorghum	mitochondrion, peroxisome, plastid	30.83	26.26
EES11417	Sorghum	peroxisome	29.25	24.92
OQU77380	Sorghum	mitochondrion	30.04	23.24
OQU91956	Sorghum	extracellular, peroxisome	29.25	23.12
VIT_00s0516g00030.t01	Wine grape	cytosol, peroxisome	65.22	16.04

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	EntrezGene:8084637	UniProt:C5X487	EnsemblPlants:EER98384	ProteinID:EER98384
ProteinID:EER98384.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061
PANTHER:PTHR43943	PANTHER:PTHR43943:SF2	InterPro:SDR_fam	EnsemblPlantsGene:SORBI_3002G111200	SUPFAM:SSF51735	unigene:Sbi.1928
InterPro:Sc_DH/Rdtase_CS	UniParc:UPI0001A83FC6	RefSeq:XP_002461863.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:-:13533057..13539294

Molecular Weight (calculated)

26723.4 Da

IEP (calculated)

8.475

GRAVY (calculated)

0.126

Length

253 amino acids

Sequence
(BLAST)

001: MDVKCRRLEG KVAVVTASTQ GIGLAIAERL GLEGAAVVIS SRKQKNVDEA VEGLRAKGIT AVGSVCHVSD AQQRKSLIET AVKSFGHIDI LVSNAAANPT
101: VDGILEMKEA VLDKLWDINV KASILLLQDA APHLRKGSSV IIISSIAGYN PEQGLTMYGV TKTALFGLTK ALAGEMGPNT RVNCIAPGFV PTRFASFLTE
201: NESIRKELNE RSKLKRLGTV EDMAAAAAFL ASDDASYITA ETIVVAGGTQ SRL

Best Arabidopsis Sequence Match ( AT4G05530.1 )
(BLAST)

001: MEKKLPRRLE GKVAIVTAST QGIGFGITER FGLEGASVVV SSRKQANVDE AVAKLKSKGI DAYGIVCHVS NAQHRRNLVE KTVQKYGKID IVVCNAAANP
101: STDPILSSKE AVLDKLWEIN VKSSILLLQD MAPHLEKGSS VIFITSIAGF SPQGAMAMYG VTKTALLGLT KALAAEMAPD TRVNAVAPGF VPTHFASFIT
201: GSSEVREGIE EKTLLNRLGT TGDMAAAAAF LASDDSSYIT GETLVVAGGM PSRL

Arabidopsis Description

SDRAShort-chain dehydrogenase/reductase SDRA [Source:UniProtKB/Swiss-Prot;Acc:Q9S9W2]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.