CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	peroxisome
PTS1:	peroxisome
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002332_P026	Maize	peroxisome	95.62	95.62
TraesCS2D01G418900.1	Wheat	peroxisome	90.24	89.63
Os04t0614000-01	Rice	cytosol	89.56	88.96
TraesCS2B01G441000.1	Wheat	peroxisome	89.23	88.63
TraesCS2A01G422500.1	Wheat	golgi, peroxisome	89.23	88.63
HORVU2Hr1G098920.1	Barley	peroxisome	88.89	88.29
EES11416	Sorghum	mitochondrion, peroxisome, plastid	88.22	88.22
GSMUA_Achr3P23590_001	Banana	peroxisome	78.45	78.45
VIT_17s0000g08740.t01	Wine grape	cytosol	32.32	78.05
GSMUA_Achr2P01480_001	Banana	peroxisome	77.78	77.78
PGSC0003DMT400056868	Potato	cytosol, peroxisome, plastid	42.42	73.68
AT3G12800.1	Thale cress	peroxisome	72.05	71.81
Solyc07g066630.2.1	Tomato	plastid	71.72	71.24
CDX73802	Canola	peroxisome	70.71	70.47
CDY00799	Canola	peroxisome	70.37	70.13
CDY08402	Canola	cytosol	69.36	70.07
Bra034728.1-P	Field mustard	cytosol	69.36	70.07
Bra001471.1-P	Field mustard	peroxisome	70.03	69.8
KRH13054	Soybean	nucleus	69.36	69.13
KRH44885	Soybean	nucleus	68.69	68.46
KXG29040	Sorghum	cytosol, peroxisome, plastid	25.93	31.82
EER98384	Sorghum	peroxisome	24.92	29.25
KXG29038	Sorghum	mitochondrion, plastid	25.59	28.79
EES10195	Sorghum	mitochondrion	25.59	28.79
EES19901	Sorghum	peroxisome	23.91	28.06
EES10199	Sorghum	mitochondrion	24.58	27.44
EES10198	Sorghum	mitochondrion, plastid	24.58	26.94
OQU84126	Sorghum	peroxisome	25.59	26.76
KXG34055	Sorghum	plastid	23.91	25.63
OQU92858	Sorghum	cytosol, peroxisome, plastid	25.25	24.35
EES08074	Sorghum	plastid	24.58	24.25
OQU77380	Sorghum	mitochondrion	25.59	23.24
OQU91956	Sorghum	extracellular, peroxisome	21.21	19.69

Protein Annotations

EnsemblPlants:EES11417	EnsemblPlantsGene:SORBI_3006G213800	EntrezGene:8063964	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR43296	PANTHER:PTHR43296:SF1	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	ProteinID:EES11417
ProteinID:EES11417.1	RefSeq:XP_002447089.1	SEG:seg	SUPFAM:SSF51735	unigene:Sbi.4970	UniParc:UPI0001A86F32
UniProt:C5YG02	MapMan:5.7.3.5.3	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:56227045..56230246

Molecular Weight (calculated)

31676.3 Da

IEP (calculated)

9.442

GRAVY (calculated)

-0.091

Length

297 amino acids

Sequence
(BLAST)

001: MESPFRADVV KGKAALVTGG GSGICFEIAA QLARHGAQVA IMGRRREVLD KAVSALRSQG LQAVGFDGDV RKQEDADRVL AATVAHFGKL DILVNGAAGN
101: FLASPEDLTP KGFRTVLEID TLGTYTMCYE ALKYLKKGGP GKGPSTGGLI INISATLHYT ASWYQIHVSA AKAGVDSITR SLALEWGTDY DIRVNGIAPG
201: PIQDTPGVRK LAPEEMSKGL RELMPLFKFG EKQDIAMAAL YLASDAGKYV NGTTLVVDGG LWLSHPRHIP KEEVRELSKV VEKKVRTSGV GAPTSKL

Best Arabidopsis Sequence Match ( AT3G12800.1 )
(BLAST)

001: MDSPFKPDVV RGQVALITGG GSGIGFEISS QFGKHGASIA IMGRRKQVLD DAVSALRSLG IQAIGLEGDV RKQEDARRVV EATFQHFGKL DILVNAAAGN
101: FLAAAEDLSP NGFRTVLDID AVGTFNMCHA ALKYLKKGAP GRDSSSGGGS IINISATLHY TASWYQIHVS AAKAAVDATT RNLALEWGTD YDIRVNGIAP
201: GPIGGTPGMS KLVPEEIENK TREYMPLYKV GEKWDIAMAA LYLSCDSGKY VSGLTMVVDG GLWLSKPRHL PKEAVKQLSR AVEKRSRAKP VGLPTSKL

Arabidopsis Description

SDRBUncharacterized protein At3g12790 [Source:UniProtKB/TrEMBL;Acc:Q0WMN4]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.