CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 5
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048723_P001	Maize	mitochondrion	89.47	90.15
TraesCS2A01G369400.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	77.07	76.78
Os11t0654400-00	Rice	mitochondrion	74.81	74.53
Os11t0652900-00	Rice	cytosol	59.02	74.41
EES10195	Sorghum	mitochondrion	71.8	72.35
KXG29038	Sorghum	mitochondrion, plastid	71.05	71.59
EES10198	Sorghum	mitochondrion, plastid	69.55	68.27
TraesCS2D01G366000.2	Wheat	peroxisome	77.07	67.43
TraesCS2B01G386600.1	Wheat	mitochondrion, plastid	76.32	67.22
KXG34055	Sorghum	plastid	68.42	65.7
HORVU2Hr1G091780.5	Barley	mitochondrion, plastid	66.17	65.19
KXG29040	Sorghum	cytosol, peroxisome, plastid	57.52	63.22
OQU84126	Sorghum	peroxisome	63.53	59.51
GSMUA_Achr9P03470_001	Banana	cytosol	58.27	57.62
GSMUA_Achr11P...	Banana	cytosol	54.89	54.48
GSMUA_Achr9P03440_001	Banana	cytosol	54.89	53.87
GSMUA_Achr9P03430_001	Banana	cytosol, mitochondrion, plastid	52.26	53.05
GSMUA_Achr9P03420_001	Banana	mitochondrion	54.51	48.17
EES08074	Sorghum	plastid	54.51	48.17
OQU92858	Sorghum	cytosol, peroxisome, plastid	51.5	44.48
GSMUA_Achr5P04560_001	Banana	cytosol	57.14	44.06
CDY35991	Canola	plastid	19.92	42.74
Bra029705.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	24.06	39.26
GSMUA_Achr6P34030_001	Banana	cytosol	51.88	38.12
OQU91956	Sorghum	extracellular, peroxisome	42.86	35.62
EES19901	Sorghum	peroxisome	33.83	35.57
EER98384	Sorghum	peroxisome	33.08	34.78
GSMUA_Achr9P03450_001	Banana	cytosol, nucleus, peroxisome	57.14	32.27
GSMUA_Achr10P...	Banana	cytosol	55.26	27.27
EES11417	Sorghum	peroxisome	27.44	24.58
EES11416	Sorghum	mitochondrion, peroxisome, plastid	27.44	24.58
OQU77380	Sorghum	mitochondrion	29.7	24.16

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	EntrezGene:8082055	UniProt:C5Y7D4	EnsemblPlants:EES10199	ProteinID:EES10199
ProteinID:EES10199.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061
PANTHER:PTHR42898	PANTHER:PTHR42898:SF1	InterPro:SDR_fam	SMART:SM00822	EnsemblPlantsGene:SORBI_3005G203100	SUPFAM:SSF51735
InterPro:Sc_DH/Rdtase_CS	UniParc:UPI0001A86C4E	RefSeq:XP_002451211.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr5:-:68824762..68826158

Molecular Weight (calculated)

27867.7 Da

IEP (calculated)

6.500

GRAVY (calculated)

0.131

Length

266 amino acids

Sequence
(BLAST)

001: MVAVGMSRAE RWNLAGATAL VTGGSKGIGH AIVEELAGFG ARVHTCSRNA AELEECRRRW EEKGLQVTVS VCDVSVRGDR EDLMATVGAT FGGRLDILVN
101: NAGQSLFKHT VECTGEDYAR IMATNLESCF HLCQLAHPLL RATGGGGGGG GSVVHISSIA GFIGLPALAV YSMTKGAMNQ LTRSLAAEWA GDGIRVNCVA
201: PGGIKTDISS DKTIDPELVK KEMARLPMGR IGEPEEVASL VAFLCMPAAS YMTGQVICID GGRTIA

Best Arabidopsis Sequence Match ( AT1G07440.1 )
(BLAST)

001: MAGAEQSQRW SLKAKTVLVT GGTKGIGHAI VEEFAGFGAV IHTCARNEYE LNECLSKWQK KGFQVTGSVC DASLRPEREK LMQTVSSMFG GKLDILINNL
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG

Arabidopsis Description

Tropinone reductase homolog At1g07440 [Source:UniProtKB/Swiss-Prot;Acc:P0DKI3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.