CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011930_P001	Maize	mitochondrion, plastid	84.48	83.57
Os01t0930900-00	Rice	mitochondrion	74.01	72.95
HORVU3Hr1G097180.1	Barley	peroxisome, plastid	72.2	72.2
TraesCS3B01G484300.1	Wheat	peroxisome, plastid	70.76	71.53
TraesCS3A01G448300.1	Wheat	peroxisome, plastid	70.76	71.53
TraesCS3D01G440700.1	Wheat	peroxisome	70.76	71.27
EES10199	Sorghum	mitochondrion	65.7	68.42
Os01t0931000-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	37.55	68.42
OQU84126	Sorghum	peroxisome	61.37	59.86
EES10195	Sorghum	mitochondrion	57.04	59.85
KXG29040	Sorghum	cytosol, peroxisome, plastid	51.99	59.5
KXG29038	Sorghum	mitochondrion, plastid	56.68	59.47
EES10198	Sorghum	mitochondrion, plastid	56.32	57.56
GSMUA_Achr9P03470_001	Banana	cytosol	52.35	53.9
GSMUA_Achr11P...	Banana	cytosol	49.1	50.75
GSMUA_Achr9P03440_001	Banana	cytosol	49.1	50.18
GSMUA_Achr9P03430_001	Banana	cytosol, mitochondrion, plastid	46.93	49.62
EES08074	Sorghum	plastid	50.9	46.84
GSMUA_Achr9P03420_001	Banana	mitochondrion	50.18	46.18
OQU92858	Sorghum	cytosol, peroxisome, plastid	46.57	41.88
GSMUA_Achr5P04560_001	Banana	cytosol	51.99	41.74
CDY35991	Canola	plastid	16.25	36.29
GSMUA_Achr6P34030_001	Banana	cytosol	46.57	35.64
Bra029705.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	20.94	35.58
OQU91956	Sorghum	extracellular, peroxisome	39.71	34.38
EES19901	Sorghum	peroxisome	30.32	33.2
EER98384	Sorghum	peroxisome	30.32	33.2
GSMUA_Achr9P03450_001	Banana	cytosol, nucleus, peroxisome	52.71	31.0
GSMUA_Achr10P...	Banana	cytosol	49.46	25.42
OQU77380	Sorghum	mitochondrion	29.6	25.08
EES11416	Sorghum	mitochondrion, peroxisome, plastid	26.71	24.92
EES11417	Sorghum	peroxisome	25.63	23.91

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	UniProt:A0A1B6Q816	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlants:KXG34055	ProteinID:KXG34055	ProteinID:KXG34055.1
InterPro:NAD(P)-bd_dom_sf	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR42898
PANTHER:PTHR42898:SF5	InterPro:SDR_fam	EnsemblPlantsGene:SORBI_3003G414100	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	UniParc:UPI00081ADF6E
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:72116853..72118435

Molecular Weight (calculated)

28372.9 Da

IEP (calculated)

5.794

GRAVY (calculated)

0.180

Length

277 amino acids

Sequence
(BLAST)

001: MAAPTTTRSR EERWSLAGKT ALVTGGSKGI GRAIVEELAG LGVRVHTCAR TAGDLDECLR AWAADASLTG RVTASVCDVS VRGERERLVS AARAELGRKL
101: DILVNNAGQT LFGAATETAP GDYARLMATN LESCFHLAQL AHPLLVEAAG GGAGAVVVNV SSIAGLVAYP ALAVYSATKG GLNQLTRSLA AEWAGDGVRV
201: NCVAPGGVRT DLSSNSGLKL DPETEARMVA AEEARVPVGR LGEPEEIASL VAFLCMPAAS YVTGQVICAD GGRTIAA

Best Arabidopsis Sequence Match ( AT1G07440.1 )
(BLAST)

001: MAGAEQSQRW SLKAKTVLVT GGTKGIGHAI VEEFAGFGAV IHTCARNEYE LNECLSKWQK KGFQVTGSVC DASLRPEREK LMQTVSSMFG GKLDILINNL
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG

Arabidopsis Description

Tropinone reductase homolog At1g07440 [Source:UniProtKB/Swiss-Prot;Acc:P0DKI3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.