Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG34055 | Sorghum | plastid | 83.57 | 84.48 |
| TraesCS3B01G484300.1 | Wheat | peroxisome, plastid | 71.43 | 72.99 |
| HORVU3Hr1G097180.1 | Barley | peroxisome, plastid | 71.79 | 72.56 |
| TraesCS3A01G448300.1 | Wheat | peroxisome, plastid | 70.71 | 72.26 |
| TraesCS3D01G440700.1 | Wheat | peroxisome | 70.71 | 72.0 |
| Os01t0930900-00 | Rice | mitochondrion | 71.79 | 71.53 |
| Zm00001d048723_P001 | Maize | mitochondrion | 64.64 | 68.56 |
| Os01t0931000-00 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 35.0 | 64.47 |
| Zm00001d007687_P001 | Maize | extracellular | 58.21 | 61.98 |
| GSMUA_Achr9P03470_001 | Banana | cytosol | 48.93 | 50.93 |
| Zm00001d048726_P001 | Maize | cytosol | 40.36 | 50.45 |
| GSMUA_Achr11P... | Banana | cytosol | 47.5 | 49.63 |
| GSMUA_Achr9P03440_001 | Banana | cytosol | 46.43 | 47.97 |
| GSMUA_Achr9P03430_001 | Banana | cytosol, mitochondrion, plastid | 43.57 | 46.56 |
| Zm00001d028575_P001 | Maize | extracellular | 44.64 | 45.79 |
| GSMUA_Achr9P03420_001 | Banana | mitochondrion | 48.21 | 44.85 |
| GSMUA_Achr5P04560_001 | Banana | cytosol | 49.64 | 40.29 |
| CDY35991 | Canola | plastid | 16.43 | 37.1 |
| Bra029705.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 20.71 | 35.58 |
| GSMUA_Achr6P34030_001 | Banana | cytosol | 42.86 | 33.15 |
| Zm00001d019439_P001 | Maize | extracellular | 29.64 | 32.81 |
| Zm00001d038897_P001 | Maize | peroxisome | 29.64 | 29.75 |
| GSMUA_Achr9P03450_001 | Banana | cytosol, nucleus, peroxisome | 49.29 | 29.3 |
| GSMUA_Achr10P... | Banana | cytosol | 48.21 | 25.05 |
| Zm00001d002332_P026 | Maize | peroxisome | 25.71 | 24.24 |
| Zm00001d026290_P001 | Maize | peroxisome | 25.71 | 24.16 |
| Zm00001d006796_P001 | Maize | extracellular | 28.21 | 22.07 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:50.1.1 | ProteinID:AQK98346.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | UniProt:K7V9S5 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF13561 |
| PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | PANTHER:PTHR42898 | PANTHER:PTHR42898:SF5 | InterPro:SDR_fam |
| SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS | UniParc:UPI000220AD0B | EnsemblPlantsGene:Zm00001d011930 | EnsemblPlants:Zm00001d011930_P001 | EnsemblPlants:Zm00001d011930_T001 |
| SEG:seg | : | : | : | : | : |
Description
Tropinone reductase 2
Coordinates
chr8:-:164802584..164803787
Molecular Weight (calculated)
28830.5 Da
IEP (calculated)
5.788
GRAVY (calculated)
0.213
Length
280 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAAGIRSR EERWSLAGKT ALVTGGSKGI GRAIVEELAG FGVRVHTCAR TAADLDERLR AWAADARLPG RVTASVCDVS ARGDREALVA AARAELGPRL
101: DILVNNAGQS TFRAATETAA GDYARLMATN LESCFHLAQL AHPLLLAAGA GAGAGAAVVN VSSIAGLVAY PALAAYSATK GGLNQLTRSL AAEWAGDGVR
201: VNCVAPGGVQ TDMFSSVALE MDPDPETSLR MMEAELARVP LRRFGETEEI ASLVAFLCMP ASSYITGQVI CADGGRTIAA
101: DILVNNAGQS TFRAATETAA GDYARLMATN LESCFHLAQL AHPLLLAAGA GAGAGAAVVN VSSIAGLVAY PALAAYSATK GGLNQLTRSL AAEWAGDGVR
201: VNCVAPGGVQ TDMFSSVALE MDPDPETSLR MMEAELARVP LRRFGETEEI ASLVAFLCMP ASSYITGQVI CADGGRTIAA
001: METDKRWSLA GKTALVTGGT RGIGRAVVEE LAKFGAKVHT CSRNQEELNA CLNDWKANGL VVSGSVCDAS VRDQREKLIQ EASSAFSGKL NILINNVGTN
101: VRKPTVEYSS EEYAKIMSTN LESAFHLSQI AHPLLKASGV GSIVFISSVA GLVHLSSGSI YGATKGALNQ LTRNLACEWA SDNIRTNCVA PWYIKTSLVE
201: TLLEKKEFVE AVVSRTPLGR VGEPEEVSSL VAFLCLPASS YITGQVISVD GGFTVNGFSY AMKP
101: VRKPTVEYSS EEYAKIMSTN LESAFHLSQI AHPLLKASGV GSIVFISSVA GLVHLSSGSI YGATKGALNQ LTRNLACEWA SDNIRTNCVA PWYIKTSLVE
201: TLLEKKEFVE AVVSRTPLGR VGEPEEVSSL VAFLCLPASS YITGQVISVD GGFTVNGFSY AMKP
Arabidopsis Description
Tropinone reductase homolog At5g06060 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHT0]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.