Factsheet for Zm00001d028575_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, peroxisome, plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G094400.1	Wheat	plastid	83.52	83.82
HORVU4Hr1G060350.3	Barley	plastid	83.52	83.82
TraesCS4D01G210800.1	Wheat	plastid	83.15	83.46
TraesCS4B01G210000.1	Wheat	plastid	82.42	82.72
OQU92858	Sorghum	cytosol, peroxisome, plastid	90.11	79.87
Os03t0269000-01	Rice	plastid	60.81	77.93
GSMUA_Achr10P...	Banana	cytosol	67.77	68.27
AT5G06060.1	Thale cress	peroxisome	65.93	68.18
VIT_13s0019g02180.t01	Wine grape	peroxisome, plasma membrane, plastid	66.3	67.54
Solyc03g096640.2.1	Tomato	mitochondrion, plastid	65.93	67.16
Bra028744.1-P	Field mustard	cytosol	64.47	66.92
CDX98899	Canola	peroxisome	64.1	66.79
CDY04977	Canola	peroxisome	64.1	66.54
CDY14094	Canola	peroxisome	64.1	66.54
PGSC0003DMT400043159	Potato	mitochondrion	65.2	66.17
Bra009159.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	61.9	64.5
CDX70101	Canola	peroxisome	61.9	64.5
KRH31007	Soybean	mitochondrion	62.64	63.1
CDY04975	Canola	mitochondrion	25.64	62.5
VIT_13s0019g02140.t01	Wine grape	peroxisome	60.81	61.25
VIT_13s0019g02130.t01	Wine grape	peroxisome	59.34	60.45
KRH31025	Soybean	plastid	60.81	59.93
KRG97856	Soybean	mitochondrion, plastid	59.34	59.56
KRG97870	Soybean	mitochondrion	54.21	59.2
KRH31026	Soybean	cytosol, mitochondrion, peroxisome, plastid	58.61	58.82
Solyc03g096660.1.1	Tomato	extracellular	40.29	56.41
PGSC0003DMT400043152	Potato	peroxisome	57.14	56.32
VIT_13s0019g02170.t01	Wine grape	mitochondrion, nucleus, peroxisome, plastid	58.61	56.14
KRG97857	Soybean	mitochondrion	49.45	54.0
KRH31021	Soybean	mitochondrion	57.51	51.82
Zm00001d007687_P001	Maize	extracellular	49.82	51.71
Zm00001d048723_P001	Maize	mitochondrion	49.45	51.14
CDX98898	Canola	cytosol, peroxisome, plasma membrane	56.78	50.0
Zm00001d048726_P001	Maize	cytosol	37.73	45.98
Zm00001d011930_P001	Maize	mitochondrion, plastid	45.79	44.64
Zm00001d019439_P001	Maize	extracellular	32.6	35.18
Zm00001d038897_P001	Maize	peroxisome	32.23	31.54
Zm00001d026290_P001	Maize	peroxisome	27.11	24.83
Zm00001d002332_P026	Maize	peroxisome	26.74	24.58
Zm00001d006796_P001	Maize	extracellular	27.11	20.67

Protein Annotations

EntrezGene:100282692	Gene3D:3.40.50.720	MapMan:50.1.1	UniProt:B6TAE7	ncoils:Coil	EMBL:EU961962
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	ProteinID:ONL96465.1	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081
ScanProsite:PS00061	PANTHER:PTHR42898	PANTHER:PTHR42898:SF14	InterPro:SDR_fam	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS
TMHMM:TMhelix	UniParc:UPI0001762315	EnsemblPlantsGene:Zm00001d028575	EnsemblPlants:Zm00001d028575_P001	EnsemblPlants:Zm00001d028575_T001	SEG:seg

Description

Tropinone reductase

Coordinates

chr1:-:39563411..39569231

Molecular Weight (calculated)

29090.8 Da

IEP (calculated)

7.408

GRAVY (calculated)

0.005

Length

273 amino acids

Sequence
(BLAST)

001: MATVETSGTA IGSSGRWALH GKTALVTGGT RGIGRAVVEE LAALGAAVHT CSRKAEELGE RIKEWEARGF SVTGSVCDLS ERDQRERLLR EVADRFGGKL
101: NILVNNVGTN IRKPTTEFTA EEYSFLMATN LESAYHLCQI AHPLLKLSGS GSIIFISSVA GAIGIFSGTI YAMTKGAINQ LTKNLACEWA KDNIRANSVA
201: PWYITTSLTE GILANKNFEE QVVSRTPLGR VGEPGEVSAL VAFLCMPGST YISGQTIAVD GGMTVNGFYP PKP

Best Arabidopsis Sequence Match ( AT5G06060.1 )
(BLAST)

001: METDKRWSLA GKTALVTGGT RGIGRAVVEE LAKFGAKVHT CSRNQEELNA CLNDWKANGL VVSGSVCDAS VRDQREKLIQ EASSAFSGKL NILINNVGTN
101: VRKPTVEYSS EEYAKIMSTN LESAFHLSQI AHPLLKASGV GSIVFISSVA GLVHLSSGSI YGATKGALNQ LTRNLACEWA SDNIRTNCVA PWYIKTSLVE
201: TLLEKKEFVE AVVSRTPLGR VGEPEEVSSL VAFLCLPASS YITGQVISVD GGFTVNGFSY AMKP

Arabidopsis Description

Tropinone reductase homolog At5g06060 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHT0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.