Factsheet for Zm00001d002332_P026

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11417	Sorghum	peroxisome	95.62	95.62
TraesCS2D01G418900.1	Wheat	peroxisome	91.92	91.3
TraesCS2B01G441000.1	Wheat	peroxisome	91.58	90.97
TraesCS2A01G422500.1	Wheat	golgi, peroxisome	91.58	90.97
HORVU2Hr1G098920.1	Barley	peroxisome	91.25	90.64
Os04t0614000-01	Rice	cytosol	90.24	89.63
Zm00001d026290_P001	Maize	peroxisome	88.55	88.25
VIT_17s0000g08740.t01	Wine grape	cytosol	32.32	78.05
GSMUA_Achr3P23590_001	Banana	peroxisome	77.44	77.44
GSMUA_Achr2P01480_001	Banana	peroxisome	77.44	77.44
PGSC0003DMT400056868	Potato	cytosol, peroxisome, plastid	42.09	73.1
Solyc07g066630.2.1	Tomato	plastid	70.37	69.9
AT3G12800.1	Thale cress	peroxisome	70.03	69.8
CDX73802	Canola	peroxisome	68.69	68.46
CDY08402	Canola	cytosol	67.68	68.37
Bra034728.1-P	Field mustard	cytosol	67.68	68.37
KRH13054	Soybean	nucleus	68.35	68.12
CDY00799	Canola	peroxisome	68.35	68.12
Bra001471.1-P	Field mustard	peroxisome	68.01	67.79
KRH44885	Soybean	nucleus	67.34	67.11
Zm00001d019439_P001	Maize	extracellular	24.92	29.25
Zm00001d007687_P001	Maize	extracellular	25.59	28.9
Zm00001d028575_P001	Maize	extracellular	24.58	26.74
Zm00001d048723_P001	Maize	mitochondrion	23.23	26.14
Zm00001d011930_P001	Maize	mitochondrion, plastid	24.24	25.71
Zm00001d038897_P001	Maize	peroxisome	23.23	24.73
Zm00001d048726_P001	Maize	cytosol	18.18	24.11
Zm00001d006796_P001	Maize	extracellular	25.59	21.23

Protein Annotations

EMBL:EU960407	EMBL:EU965333	EnsemblPlants:Zm00001d002332_P026	EnsemblPlants:Zm00001d002332_T026	EnsemblPlantsGene:Zm00001d002332	EntrezGene:100194355
Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	PANTHER:PTHR43296	PANTHER:PTHR43296:SF1	PFAM:PF13561
PRINTS:PR00080	PRINTS:PR00081	ProteinID:ONM13988.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI000182C214
UniProt:B6T5Z2	MapMan:5.7.3.5.3	:	:	:	:

Description

MADS-transcription factor 9NAD(P)-binding Rossmann-fold superfamily protein

Coordinates

chr2:-:10493276..10496200

Molecular Weight (calculated)

31722.4 Da

IEP (calculated)

9.617

GRAVY (calculated)

-0.069

Length

297 amino acids

Sequence
(BLAST)

001: MESPFRADVV KDKAALVTGG GSGICFEIAA QLARHGAQVA IMGRRREVLD KAVAALRSQG LRAVGFDGDV RNQEDAARVL AATVAHFGKL DILVNGAAGN
101: FLASPEDLTP KGFRTVLEID TLGTYTMCYE ALKYLKKGGP GKGPSTGGLI INISATLHYS ASWYQIHVSA AKAGVDSITR SLALEWGTDY DIRVNGIAPG
201: PIQDTPGLRK LAPEEMSKGL REMMPLFKFG EKRDIAMAAL YLASDAGKYV NGTTLVVDGG LWLSHPRHIP KEEVRELSKV VEKKVRASGV GVTSSKL

Best Arabidopsis Sequence Match ( AT3G12800.1 )
(BLAST)

001: MDSPFKPDVV RGQVALITGG GSGIGFEISS QFGKHGASIA IMGRRKQVLD DAVSALRSLG IQAIGLEGDV RKQEDARRVV EATFQHFGKL DILVNAAAGN
101: FLAAAEDLSP NGFRTVLDID AVGTFNMCHA ALKYLKKGAP GRDSSSGGGS IINISATLHY TASWYQIHVS AAKAAVDATT RNLALEWGTD YDIRVNGIAP
201: GPIGGTPGMS KLVPEEIENK TREYMPLYKV GEKWDIAMAA LYLSCDSGKY VSGLTMVVDG GLWLSKPRHL PKEAVKQLSR AVEKRSRAKP VGLPTSKL

Arabidopsis Description

SDRBUncharacterized protein At3g12790 [Source:UniProtKB/TrEMBL;Acc:Q0WMN4]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.