Factsheet for Zm00001d038897_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19901	Sorghum	peroxisome	86.74	95.65
Zm00001d019439_P001	Maize	extracellular	81.72	90.12
TraesCS5D01G169300.1	Wheat	peroxisome	78.49	86.56
TraesCS5A01G164400.1	Wheat	peroxisome	78.49	86.56
HORVU0Hr1G012410.1	Barley	peroxisome	77.78	85.77
TraesCS5B01G161900.1	Wheat	peroxisome	77.42	85.38
Os09t0133200-01	Rice	peroxisome	73.84	81.42
KRH02005	Soybean	endoplasmic reticulum, nucleus	63.44	70.24
CDX94534	Canola	peroxisome	62.72	68.63
CDY35231	Canola	peroxisome	30.47	68.55
CDY16690	Canola	peroxisome	62.37	68.24
Bra029476.1-P	Field mustard	peroxisome	62.37	68.24
AT4G05530.1	Thale cress	peroxisome	61.29	67.32
GSMUA_Achr3P01040_001	Banana	cytosol	22.58	65.62
Solyc04g014670.2.1	Tomato	plastid	58.42	64.43
PGSC0003DMT400034518	Potato	peroxisome	58.42	64.17
CDY27447	Canola	cytosol, mitochondrion, peroxisome	59.14	63.95
CDX76382	Canola	cytosol, mitochondrion, peroxisome	58.42	63.42
Bra020854.1-P	Field mustard	cytosol, mitochondrion, peroxisome	58.06	63.03
HORVU5Hr1G049670.1	Barley	peroxisome	56.99	62.85
GSMUA_Achr3P01030_001	Banana	mitochondrion	48.75	61.54
KRH36525	Soybean	endoplasmic reticulum	55.91	61.18
KRH11511	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	55.56	60.78
KRH70902	Soybean	cytosol	21.51	54.55
Zm00001d028575_P001	Maize	extracellular	31.54	32.23
Zm00001d048723_P001	Maize	mitochondrion	30.11	31.82
Zm00001d007687_P001	Maize	extracellular	28.67	30.42
Zm00001d011930_P001	Maize	mitochondrion, plastid	29.75	29.64
Zm00001d048726_P001	Maize	cytosol	23.3	29.02
Zm00001d026290_P001	Maize	peroxisome	26.88	25.17
Zm00001d002332_P026	Maize	peroxisome	24.73	23.23
Zm00001d006796_P001	Maize	extracellular	24.37	18.99
VIT_00s0516g00030.t01	Wine grape	cytosol, peroxisome	57.35	15.55

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	UniProt:A0A1D6MBR4	ProteinID:AQK88200.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106
PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR43943	PANTHER:PTHR43943:SF2
InterPro:SDR_fam	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	UniParc:UPI00084566D1	EnsemblPlantsGene:Zm00001d038897	EnsemblPlants:Zm00001d038897_P001
EnsemblPlants:Zm00001d038897_T001	SEG:seg	:	:	:	:

Description

Short-chain dehydrogenase/reductase SDRA

Coordinates

chr6:-:166669163..166674601

Molecular Weight (calculated)

29410.9 Da

IEP (calculated)

8.066

GRAVY (calculated)

0.337

Length

279 amino acids

Sequence
(BLAST)

001: MDVKCRRLEG KVAVVTASTQ GIGLAIAERL GLEGAAAVVS SRKQKNVDEA VEGLKAKGIT VVGAVCHVSD AQQRKNIIET AVKVATVEGG SSLSGLVLLS
101: SNQLIIWLQN FGHIDILVSN AAANPTVNVI LEMKEVVLDK LWDINVKASI LLIQDAAPHL RAGSSVILIS SIAGYNPEQG LTMYGVTKTA LFGLTKALAG
201: EMGPDIRVNC IAPGFVPTRF ASFFIDNETI RKKLNERTML KRLGSVEDMA AAAAFLASDD ASFITAETIV VAGGVPSRL

Best Arabidopsis Sequence Match ( AT4G05530.1 )
(BLAST)

001: MEKKLPRRLE GKVAIVTAST QGIGFGITER FGLEGASVVV SSRKQANVDE AVAKLKSKGI DAYGIVCHVS NAQHRRNLVE KTVQKYGKID IVVCNAAANP
101: STDPILSSKE AVLDKLWEIN VKSSILLLQD MAPHLEKGSS VIFITSIAGF SPQGAMAMYG VTKTALLGLT KALAAEMAPD TRVNAVAPGF VPTHFASFIT
201: GSSEVREGIE EKTLLNRLGT TGDMAAAAAF LASDDSSYIT GETLVVAGGM PSRL

Arabidopsis Description

SDRAShort-chain dehydrogenase/reductase SDRA [Source:UniProtKB/Swiss-Prot;Acc:Q9S9W2]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.