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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 1
  • peroxisome 4
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:peroxisome
WoLF PSORT:peroxisome
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY35231 Canola peroxisome 48.63 100.0
Bra029476.1-P Field mustard peroxisome 99.61 99.61
CDX94534 Canola peroxisome 98.43 98.43
AT4G05530.1 Thale cress peroxisome 93.73 94.09
CDY27447 Canola cytosol, mitochondrion, peroxisome 85.1 84.11
CDX76382 Canola cytosol, mitochondrion, peroxisome 84.71 84.05
KRH02005 Soybean endoplasmic reticulum, nucleus 74.12 75.0
Solyc04g014670.2.1 Tomato plastid 72.94 73.52
Zm00001d019439_P001 Maize extracellular 70.98 71.54
EER98384 Sorghum peroxisome 70.59 71.15
PGSC0003DMT400034518 Potato peroxisome 69.8 70.08
EES19901 Sorghum peroxisome 69.41 69.96
KRH36525 Soybean endoplasmic reticulum 69.8 69.8
KRH11511 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole 69.8 69.8
GSMUA_Achr3P01040_001 Banana cytosol 25.88 68.75
TraesCS5D01G169300.1 Wheat peroxisome 67.84 68.38
TraesCS5A01G164400.1 Wheat peroxisome 67.84 68.38
HORVU0Hr1G012410.1 Barley peroxisome 67.45 67.98
TraesCS5B01G161900.1 Wheat peroxisome 66.67 67.19
Os09t0133200-01 Rice peroxisome 65.49 66.01
GSMUA_Achr3P01030_001 Banana mitochondrion 56.47 65.16
Zm00001d038897_P001 Maize peroxisome 68.24 62.37
KRH70902 Soybean cytosol 23.92 55.45
HORVU5Hr1G049670.1 Barley peroxisome 50.2 50.59
CDX98899 Canola peroxisome 34.12 33.21
CDY04977 Canola peroxisome 34.12 33.08
CDX70101 Canola peroxisome 33.73 32.82
CDY14094 Canola peroxisome 33.73 32.7
CDY45434 Canola cytosol, nucleus, plastid 32.94 32.06
CDY40183 Canola plastid 32.55 31.68
CDY52942 Canola mitochondrion 32.94 31.58
CDY09917 Canola cytosol 32.16 31.3
CDY40175 Canola plasma membrane 32.16 31.3
CDY16437 Canola mitochondrion 32.55 31.2
CDY62820 Canola cytosol, endoplasmic reticulum, peroxisome 32.16 31.18
CDY40186 Canola cytosol 25.1 30.92
CDY09823 Canola peroxisome 32.55 30.63
CDY31776 Canola cytosol, peroxisome, plastid 32.55 30.63
CDY06260 Canola plastid 31.37 30.53
CDY06706 Canola mitochondrion 31.76 30.45
CDY64214 Canola mitochondrion 20.39 30.41
CDX97893 Canola mitochondrion 32.16 30.26
CDY09824 Canola mitochondrion 32.16 30.26
CDY31774 Canola cytosol 27.84 30.21
CDY31772 Canola cytosol, peroxisome, plastid 30.98 30.15
CDY45432 Canola cytosol 30.98 30.15
CDX83307 Canola peroxisome 30.98 30.15
CDY35991 Canola plastid 14.51 29.84
CDX97895 Canola cytosol 27.45 29.79
CDX86485 Canola cytosol, peroxisome, plastid 30.59 29.77
CDX95751 Canola peroxisome 30.59 29.77
CDY40188 Canola cytosol, peroxisome, plasma membrane 30.59 29.77
CDY31773 Canola plastid 30.59 29.77
CDY14610 Canola mitochondrion 30.98 29.7
CDY10276 Canola mitochondrion 30.98 29.7
CDY16436 Canola endoplasmic reticulum, vacuole 12.16 29.52
CDY04975 Canola mitochondrion 12.94 29.46
CDY40182 Canola cytosol, peroxisome, plastid 30.2 29.39
CDX83306 Canola plastid 30.2 29.39
CDY45435 Canola cytosol, peroxisome, plastid 30.2 29.39
CDY68057 Canola cytosol 30.2 29.39
CDY72061 Canola cytosol 12.55 29.36
CDY40179 Canola cytosol, peroxisome, plastid 29.8 29.12
CDY51372 Canola plastid 31.76 29.03
CDX97899 Canola peroxisome 29.8 29.01
CDX95753 Canola cytosol, peroxisome, plastid 29.8 29.01
CDY31768 Canola cytosol, peroxisome, plastid 29.8 29.01
CDY45438 Canola cytosol 29.8 29.01
CDY40171 Canola cytosol 25.1 28.96
CDY31770 Canola plastid 26.27 28.88
CDX95750 Canola cytosol 30.98 28.83
CDY40165 Canola plastid 29.41 28.63
CDY40185 Canola plastid 29.41 28.63
CDX86486 Canola cytosol, peroxisome, plastid 29.41 28.63
CDY45441 Canola cytosol 25.1 28.57
CDX97897 Canola cytosol, extracellular 24.71 27.27
CDY27781 Canola cytosol, peroxisome, plastid 30.2 26.64
CDY45433 Canola cytosol 25.49 26.53
CDX98898 Canola cytosol, peroxisome, plasma membrane 32.16 26.45
CDX95752 Canola cytosol 24.31 26.05
CDY17559 Canola cytoskeleton, nucleus, peroxisome 28.24 25.09
CDY43488 Canola cytosol 28.24 24.91
CDY40177 Canola cytosol 27.06 24.91
CDX73802 Canola peroxisome 29.02 24.83
CDY00799 Canola peroxisome 28.63 24.5
CDY08402 Canola cytosol 28.24 24.49
CDY05152 Canola cytosol 21.96 23.43
CDX97890 Canola cytosol 30.59 23.01
CDY65683 Canola cytosol, mitochondrion 31.76 20.3
CDY05153 Canola cytosol, nucleus, plastid 5.1 18.57
VIT_00s0516g00030.t01 Wine grape cytosol, peroxisome 71.76 17.78
CDY31767 Canola plastid 33.33 15.1
CDY50145 Canola plastid 30.2 10.64
Protein Annotations
Gene3D:3.40.50.720MapMan:35.1GO:A0A078FQE6UniProt:A0A078FQE6EnsemblPlants:CDY16690ProteinID:CDY16690
ProteinID:CDY16690.1GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0016491
GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00094542001InterPro:NAD(P)-bd_dom_sfPFAM:PF13561PRINTS:PR00080PRINTS:PR00081
ScanProsite:PS00061PANTHER:PTHR43943PANTHER:PTHR43943:SF2InterPro:SDR_famSUPFAM:SSF51735InterPro:Sc_DH/Rdtase_CS
UniParc:UPI0004EF265BSEG:seg::::
Description
BnaA09g20680DBnaA09g20680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQE6]
Coordinates
chrLK032066:+:565255..566716
Molecular Weight (calculated)
27040.7 Da
IEP (calculated)
8.235
GRAVY (calculated)
0.058
Length
255 amino acids
Sequence
(BLAST)
001: MEGKKIGRRL EGKVAIVTAS TQGIGFGIIE RFGLEGASVV VSSRKQANVE EAVEKLKSKG IDAHGIVCHV SNAQHRRNLV EKTVQKYGKI DILVCNAAAN
101: PSTDPILSTK EAVLDKLWEI NVKSSILLLQ DMAPHLEKGS SVIFITSIAG FQPQGSMAMY GVTKTALLGL TKALAAEMGP DTRVNAVAPG FVPTHFASFI
201: TENSQVRESI EEKTLLNRLG TTGDMAAAAA FLASDDSSYI TGETLVVAGG MPSRL
Best Arabidopsis Sequence Match ( AT4G05530.1 )
(BLAST)
001: MEKKLPRRLE GKVAIVTAST QGIGFGITER FGLEGASVVV SSRKQANVDE AVAKLKSKGI DAYGIVCHVS NAQHRRNLVE KTVQKYGKID IVVCNAAANP
101: STDPILSSKE AVLDKLWEIN VKSSILLLQD MAPHLEKGSS VIFITSIAGF SPQGAMAMYG VTKTALLGLT KALAAEMAPD TRVNAVAPGF VPTHFASFIT
201: GSSEVREGIE EKTLLNRLGT TGDMAAAAAF LASDDSSYIT GETLVVAGGM PSRL
Arabidopsis Description
SDRAShort-chain dehydrogenase/reductase SDRA [Source:UniProtKB/Swiss-Prot;Acc:Q9S9W2]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.