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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 1
  • peroxisome 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome, plastid
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX95752

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G29320.1 CDX95752 AT2G29310.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra039513.1-P Field mustard peroxisome 98.86 98.86
CDX95751 Canola peroxisome 96.56 96.56
AT2G29320.1 Thale cress mitochondrion 87.4 85.13
CDY31768 Canola cytosol, peroxisome, plastid 85.11 85.11
CDY31773 Canola plastid 85.11 85.11
CDY40182 Canola cytosol, peroxisome, plastid 85.11 85.11
CDY45432 Canola cytosol 84.35 84.35
CDY40188 Canola cytosol, peroxisome, plasma membrane 84.35 84.35
CDY40186 Canola cytosol 66.41 84.06
CDX83306 Canola plastid 83.59 83.59
CDY31772 Canola cytosol, peroxisome, plastid 83.59 83.59
CDY45435 Canola cytosol, peroxisome, plastid 82.82 82.82
CDX97897 Canola cytosol, extracellular 72.9 82.68
CDX95753 Canola cytosol, peroxisome, plastid 82.44 82.44
CDX97899 Canola peroxisome 82.44 82.44
CDY40185 Canola plastid 80.15 80.15
AT2G29300.2 Thale cress extracellular 84.35 77.27
CDY40175 Canola plasma membrane 76.72 76.72
CDY45434 Canola cytosol, nucleus, plastid 76.34 76.34
CDY45438 Canola cytosol 76.34 76.34
CDY40183 Canola plastid 76.34 76.34
CDY45433 Canola cytosol 70.99 75.92
CDY40165 Canola plastid 75.57 75.57
CDY40179 Canola cytosol, peroxisome, plastid 74.81 75.1
CDY62820 Canola cytosol, endoplasmic reticulum, peroxisome 75.19 74.9
CDY31774 Canola cytosol 66.79 74.47
CDX97895 Canola cytosol 66.79 74.47
CDY45441 Canola cytosol 63.36 74.11
CDY40171 Canola cytosol 61.45 72.85
CDX86486 Canola cytosol, peroxisome, plastid 70.99 70.99
CDY31770 Canola plastid 61.45 69.4
CDX95752 Canola cytosol 62.98 69.33
CDY09917 Canola cytosol 69.08 69.08
CDY68057 Canola cytosol 68.7 68.7
CDY06260 Canola plastid 67.56 67.56
CDY10276 Canola mitochondrion 67.56 66.54
CDY14610 Canola mitochondrion 67.56 66.54
CDY06706 Canola mitochondrion 67.18 66.17
CDX86485 Canola cytosol, peroxisome, plastid 65.65 65.65
CDY52942 Canola mitochondrion 65.65 64.66
Solyc03g096650.1.1 Tomato cytosol 21.76 64.04
CDY16437 Canola mitochondrion 64.89 63.91
CDY64214 Canola mitochondrion 41.6 63.74
CDY40177 Canola cytosol 67.18 63.54
CDY04977 Canola peroxisome 62.6 62.36
CDX98899 Canola peroxisome 61.83 61.83
CDY14094 Canola peroxisome 61.83 61.6
CDX70101 Canola peroxisome 61.07 61.07
CDY04975 Canola mitochondrion 25.57 59.82
KRH24733 Soybean nucleus 60.31 59.62
VIT_06s0004g05320.t01 Wine grape endoplasmic reticulum, peroxisome, plastid 57.25 59.52
KRH24731 Soybean nucleus 60.31 59.18
VIT_06s0004g05370.t01 Wine grape peroxisome 56.87 59.13
CDY31776 Canola cytosol, peroxisome, plastid 60.69 58.67
CDX97893 Canola mitochondrion 60.69 58.67
CDY09824 Canola mitochondrion 60.69 58.67
CDY09823 Canola peroxisome 60.69 58.67
VIT_06s0004g05400.t01 Wine grape cytosol 24.81 58.56
VIT_06s0004g05440.t01 Wine grape cytosol 18.32 58.54
VIT_06s0004g05380.t01 Wine grape plastid 60.31 58.52
CDY16436 Canola endoplasmic reticulum, vacuole 23.28 58.1
CDX95750 Canola cytosol 59.92 57.3
KRH24732 Soybean cytosol, endoplasmic reticulum, plastid 58.78 57.25
VIT_06s0004g05430.t01 Wine grape mitochondrion, nucleus, peroxisome 58.4 56.67
VIT_06s0004g05310.t01 Wine grape cytosol 24.43 56.64
VIT_06s0004g05330.t01 Wine grape peroxisome 54.2 55.91
CDY72061 Canola cytosol 22.9 55.05
CDY51372 Canola plastid 58.4 54.84
CDY35991 Canola plastid 25.57 54.03
VIT_06s0004g05360.t01 Wine grape cytosol, mitochondrion, plastid 49.24 53.75
KRH29740 Soybean cytosol 19.08 51.02
VIT_06s0004g05390.t01 Wine grape cytosol, plasma membrane, plastid 46.56 49.59
VIT_06s0004g05450.t01 Wine grape plasma membrane 33.21 48.33
CDX98898 Canola cytosol, peroxisome, plasma membrane 56.49 47.74
CDX97890 Canola cytosol 59.16 45.72
GSMUA_Achr5P04570_001 Banana cytosol 22.14 45.67
CDY65683 Canola cytosol, mitochondrion 66.41 43.61
CDY35231 Canola peroxisome 17.94 37.9
CDY31767 Canola plastid 72.52 33.75
CDY16690 Canola peroxisome 30.15 30.98
CDY50145 Canola plastid 84.73 30.66
CDX94534 Canola peroxisome 29.77 30.59
CDX76382 Canola cytosol, mitochondrion, peroxisome 29.39 29.96
CDY27447 Canola cytosol, mitochondrion, peroxisome 29.39 29.84
CDY27781 Canola cytosol, peroxisome, plastid 27.48 24.91
CDY43488 Canola cytosol 27.48 24.91
CDY17559 Canola cytoskeleton, nucleus, peroxisome 26.34 24.04
CDY05152 Canola cytosol 21.37 23.43
CDY08402 Canola cytosol 24.43 21.77
CDX73802 Canola peroxisome 24.05 21.14
CDY00799 Canola peroxisome 24.05 21.14
CDY05153 Canola cytosol, nucleus, plastid 5.34 20.0
Protein Annotations
EnsemblPlants:CDX83307EnsemblPlantsGene:GSBRNA2T00138864001Gene3D:3.40.50.720GO:A0A078D2F4GO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152GO:GO:0016491InterPro:NAD(P)-bd_dom_sfInterPro:SDR_famInterPro:Sc_DH/Rdtase_CS
PANTHER:PTHR42898PANTHER:PTHR42898:SF7PFAM:PF13561PRINTS:PR00080PRINTS:PR00081ProteinID:CDX83307
ProteinID:CDX83307.1ScanProsite:PS00061SUPFAM:SSF51735UniParc:UPI0004EF4C92MapMan:50.1.1:
Description
BnaA03g21990D
Coordinates
chrLK031832:+:962300..963644
Molecular Weight (calculated)
28189.7 Da
IEP (calculated)
7.676
GRAVY (calculated)
0.118
Length
262 amino acids
Sequence
(BLAST)
001: MDKRWSLQGM TALVTGGASG IGYAIVEELA NFGAKIHVCD ISETLLNQSL SEWNKKGFQV KGSVCDVTSR SERETLIQNV SSLFDGKLNI LVNNVGVLRG
101: KPTIEYVAVD FAYHSSTNLE AAFHFCQLSY PLLKASGYGS IVFLSSVAGV VSFECGSIYG VTKGALNQLA RNLACEWAKD GIRANAVAPN VVKTRQSQSY
201: LEDVSFKEKL FCRTPLGRAG EPNEVASLVV FLCLPAASYI TGQTICVDGG LTVNGFSYQS RA
Best Arabidopsis Sequence Match ( AT2G29320.1 )
(BLAST)
001: MVTRKMDKRL WSLQGMTALV TGAASGIGYA IVEELAGFGA KIHICDISKT LLNQSLSEWE NKGFQVSGSV CDVTSHPERE KLMQTVSSIF DGKLNILVNN
101: VGVLRGKPTT EYVADDFTFH ISTNLEAAYH FCQLSHPLLK ASGYGSIVFL SSVAGVVSLI DCGSIYGLTK GALNQLARNL ACEWAKDGIR ANAVAPNVVK
201: TAQSQSFLED VSKKEGLLSR TPLGRVGEPN EVSSLVVFLC LPAASYITGQ TICVDGGLTV NGFSYQPHA
Arabidopsis Description
Tropinone reductase homolog At2g29320 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW15]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.