CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45435	Canola	cytosol, peroxisome, plastid	96.95	96.95
CDX95751	Canola	peroxisome	85.11	85.11
CDX83307	Canola	peroxisome	85.11	85.11
CDY40186	Canola	cytosol	66.41	84.06
CDY45432	Canola	cytosol	83.97	83.97
CDX83306	Canola	plastid	83.59	83.59
CDX95753	Canola	cytosol, peroxisome, plastid	83.21	83.21
CDY40188	Canola	cytosol, peroxisome, plasma membrane	83.21	83.21
CDY31773	Canola	plastid	82.82	82.82
CDY31772	Canola	cytosol, peroxisome, plastid	82.06	82.06
CDY31768	Canola	cytosol, peroxisome, plastid	81.68	81.68
CDX97897	Canola	cytosol, extracellular	71.37	80.95
CDX97899	Canola	peroxisome	80.53	80.53
CDY40185	Canola	plastid	79.01	79.01
CDY45433	Canola	cytosol	69.85	74.69
CDY40175	Canola	plasma membrane	74.43	74.43
CDY45434	Canola	cytosol, nucleus, plastid	74.05	74.05
CDY40183	Canola	plastid	74.05	74.05
CDY45438	Canola	cytosol	72.9	72.9
CDY40165	Canola	plastid	72.14	72.14
CDY31774	Canola	cytosol	64.5	71.91
CDX97895	Canola	cytosol	64.5	71.91
CDY62820	Canola	cytosol, endoplasmic reticulum, peroxisome	72.14	71.86
CDY40179	Canola	cytosol, peroxisome, plastid	71.37	71.65
CDY40171	Canola	cytosol	59.16	70.14
CDY45441	Canola	cytosol	59.92	70.09
CDX95752	Canola	cytosol	62.98	69.33
CDX86486	Canola	cytosol, peroxisome, plastid	68.32	68.32
CDY09917	Canola	cytosol	67.94	67.94
CDY31770	Canola	plastid	59.16	66.81
CDY06260	Canola	plastid	66.79	66.79
CDY14610	Canola	mitochondrion	67.18	66.17
CDY10276	Canola	mitochondrion	67.18	66.17
CDY06706	Canola	mitochondrion	67.18	66.17
CDY68057	Canola	cytosol	66.03	66.03
CDX86485	Canola	cytosol, peroxisome, plastid	64.5	64.5
CDY16437	Canola	mitochondrion	64.89	63.91
CDY52942	Canola	mitochondrion	64.12	63.16
CDY16436	Canola	endoplasmic reticulum, vacuole	24.81	61.9
Solyc03g096650.1.1	Tomato	cytosol	20.99	61.8
KRH24731	Soybean	nucleus	62.6	61.42
KRH24733	Soybean	nucleus	61.07	60.38
CDY40177	Canola	cytosol	63.74	60.29
CDY64214	Canola	mitochondrion	39.31	60.23
CDY04977	Canola	peroxisome	60.31	60.08
CDX98899	Canola	peroxisome	59.92	59.92
CDY04975	Canola	mitochondrion	25.57	59.82
CDY14094	Canola	peroxisome	59.54	59.32
CDX70101	Canola	peroxisome	59.16	59.16
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	59.92	58.36
VIT_06s0004g05370.t01	Wine grape	peroxisome	55.73	57.94
CDY31776	Canola	cytosol, peroxisome, plastid	59.54	57.56
CDY09824	Canola	mitochondrion	59.54	57.56
CDY09823	Canola	peroxisome	59.54	57.56
CDX97893	Canola	mitochondrion	59.54	57.56
VIT_06s0004g05320.t01	Wine grape	endoplasmic reticulum, peroxisome, plastid	55.34	57.54
VIT_06s0004g05400.t01	Wine grape	cytosol	24.05	56.76
VIT_06s0004g05380.t01	Wine grape	plastid	58.02	56.3
VIT_06s0004g05440.t01	Wine grape	cytosol	17.56	56.1
CDX95750	Canola	cytosol	58.4	55.84
VIT_06s0004g05310.t01	Wine grape	cytosol	24.05	55.75
VIT_06s0004g05430.t01	Wine grape	mitochondrion, nucleus, peroxisome	57.25	55.56
CDY51372	Canola	plastid	57.63	54.12
VIT_06s0004g05330.t01	Wine grape	peroxisome	52.29	53.94
KRH29740	Soybean	cytosol	19.85	53.06
VIT_06s0004g05360.t01	Wine grape	cytosol, mitochondrion, plastid	48.09	52.5
CDY72061	Canola	cytosol	21.76	52.29
CDY35991	Canola	plastid	23.66	50.0
VIT_06s0004g05390.t01	Wine grape	cytosol, plasma membrane, plastid	45.8	48.78
CDX98898	Canola	cytosol, peroxisome, plasma membrane	54.58	46.13
GSMUA_Achr5P04570_001	Banana	cytosol	22.14	45.67
VIT_06s0004g05450.t01	Wine grape	plasma membrane	31.3	45.56
CDX97890	Canola	cytosol	58.02	44.84
CDY65683	Canola	cytosol, mitochondrion	66.03	43.36
CDY35231	Canola	peroxisome	16.79	35.48
CDY31767	Canola	plastid	71.76	33.39
CDX94534	Canola	peroxisome	29.39	30.2
CDY16690	Canola	peroxisome	29.39	30.2
CDX76382	Canola	cytosol, mitochondrion, peroxisome	29.01	29.57
CDY50145	Canola	plastid	81.68	29.56
CDY27447	Canola	cytosol, mitochondrion, peroxisome	29.01	29.46
CDY43488	Canola	cytosol	29.39	26.64
CDY17559	Canola	cytoskeleton, nucleus, peroxisome	28.24	25.78
CDY27781	Canola	cytosol, peroxisome, plastid	28.24	25.61
CDY05152	Canola	cytosol	21.76	23.85
CDY00799	Canola	peroxisome	25.95	22.82
CDX73802	Canola	peroxisome	25.95	22.82
CDY08402	Canola	cytosol	25.57	22.79
CDY05153	Canola	cytosol, nucleus, plastid	4.96	18.57

Protein Annotations

EnsemblPlants:CDY40182	EnsemblPlantsGene:GSBRNA2T00069318001	Gene3D:3.40.50.720	GO:A0A078HQR4	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR42898	PANTHER:PTHR42898:SF7	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	ProteinID:CDY40182
ProteinID:CDY40182.1	SUPFAM:SSF51735	UniParc:UPI0004EEF365	UniProt:A0A078HQR4	MapMan:50.1.1	:

Description

BnaC04g14100DBnaC04g14100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HQR4]

Coordinates

chrLK032465:-:201378..202915

Molecular Weight (calculated)

28376.1 Da

IEP (calculated)

6.502

GRAVY (calculated)

0.107

Length

262 amino acids

Sequence
(BLAST)

001: MDKRWSLQGM TALVTGGASG IGYAIVEELA RFGAKIHVCD ISEVMLNQSL SEWEKKGFHV SGSVCDVTSL SERETLIQSV SSLFDGKLNI LVNNVGVLRG
101: KRTLEYAKED FDFHISTNLE PAFNFCQLSH PLLKASGYGS IIFMSSITGI LSFTAGSIYN LTKGALNQLA RNLACEWAKD GIRANAVAPN VIKTPLSQSY
201: LDDVKFKEEL CRRTPLGRAG ELNEVASLVV FLCLPAASYI TGQTICVDGG LTVNGFSYQS NA

Best Arabidopsis Sequence Match ( AT2G29300.1 )
(BLAST)

001: MDKRWSLQGM TALVTGAASG IGYAIVEELA GFGARIHVCD ISETLLNQSL REWEKKGFQV SGSVCDVTSR PEREKLMQTV SSLFDGKLNI LVNNVGVLRA
101: KPTTEYVADD FTFHISTNLE AAYHFCQLSH PLLKTSGYGS IVFLSSVSGV VSITDCGSLY GLTKGALNQL ARNLACEWAK DGIRANAVAP NVVKTAQSQF
201: FLQDVSKKEG LFSRTPLGRS GEPNEVASLV VFLCLPAASY ITGQTICIDG GLTVYGFSSQ PQA

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IKL5]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.