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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, peroxisome, nucleus

Predictor Summary:
  • cytosol 2
  • mitochondrion 3
  • plastid 1
  • nucleus 1
  • peroxisome 1
PPI

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G07440.1 VIT_06s0004g05310.t01 AT2G29310.1 21798944
AT1G07440.1 VIT_06s0004g05320.t01 AT2G29310.1 21798944
AT1G07440.1 VIT_06s0004g05330.t01 AT2G29310.1 21798944
AT1G07440.1 VIT_06s0004g05360.t01 AT2G29310.1 21798944
AT1G07440.1 VIT_06s0004g05370.t01 AT2G29310.1 21798944
AT1G07440.1 VIT_06s0004g05380.t01 AT2G29310.1 21798944
AT1G07440.1 VIT_06s0004g05390.t01 AT2G29310.1 21798944
AT1G07440.1 VIT_06s0004g05400.t01 AT2G29310.1 21798944
AT1G07440.1 VIT_06s0004g05430.t01 AT2G29310.1 21798944
AT1G07440.1 VIT_06s0004g05440.t01 AT2G29310.1 21798944
AT1G07440.1 VIT_06s0004g05450.t01 AT2G29310.1 21798944
AT1G07450.1 VIT_06s0004g05310.t01 AT2G29320.1 21798944
AT1G07450.1 VIT_06s0004g05320.t01 AT2G29320.1 21798944
AT1G07450.1 VIT_06s0004g05330.t01 AT2G29320.1 21798944
AT1G07450.1 VIT_06s0004g05360.t01 AT2G29320.1 21798944
AT1G07450.1 VIT_06s0004g05370.t01 AT2G29320.1 21798944
AT1G07450.1 VIT_06s0004g05380.t01 AT2G29320.1 21798944
AT1G07450.1 VIT_06s0004g05390.t01 AT2G29320.1 21798944
AT1G07450.1 VIT_06s0004g05400.t01 AT2G29320.1 21798944
AT1G07450.1 VIT_06s0004g05430.t01 AT2G29320.1 21798944
AT1G07450.1 VIT_06s0004g05440.t01 AT2G29320.1 21798944
AT1G07450.1 VIT_06s0004g05450.t01 AT2G29320.1 21798944
AT1G07450.1 VIT_06s0004g05310.t01 AT2G29350.1 21798944
AT1G07450.1 VIT_06s0004g05320.t01 AT2G29350.1 21798944
AT1G07450.1 VIT_06s0004g05330.t01 AT2G29350.1 21798944
AT1G07450.1 VIT_06s0004g05360.t01 AT2G29350.1 21798944
AT1G07450.1 VIT_06s0004g05370.t01 AT2G29350.1 21798944
AT1G07450.1 VIT_06s0004g05380.t01 AT2G29350.1 21798944
AT1G07450.1 VIT_06s0004g05390.t01 AT2G29350.1 21798944
AT1G07450.1 VIT_06s0004g05400.t01 AT2G29350.1 21798944
AT1G07450.1 VIT_06s0004g05430.t01 AT2G29350.1 21798944
AT1G07450.1 VIT_06s0004g05440.t01 AT2G29350.1 21798944
AT1G07450.1 VIT_06s0004g05450.t01 AT2G29350.1 21798944
AT2G29310.1 VIT_06s0004g05310.t01 AT1G07450.1 21798944
AT2G29310.1 VIT_06s0004g05320.t01 AT1G07450.1 21798944
AT2G29310.1 VIT_06s0004g05330.t01 AT1G07450.1 21798944
AT2G29310.1 VIT_06s0004g05360.t01 AT1G07450.1 21798944
AT2G29310.1 VIT_06s0004g05370.t01 AT1G07450.1 21798944
AT2G29310.1 VIT_06s0004g05380.t01 AT1G07450.1 21798944
AT2G29310.1 VIT_06s0004g05390.t01 AT1G07450.1 21798944
AT2G29310.1 VIT_06s0004g05400.t01 AT1G07450.1 21798944
AT2G29310.1 VIT_06s0004g05430.t01 AT1G07450.1 21798944
AT2G29310.1 VIT_06s0004g05440.t01 AT1G07450.1 21798944
AT2G29310.1 VIT_06s0004g05450.t01 AT1G07450.1 21798944
AT2G29310.1 VIT_06s0004g05310.t01 AT2G29310.1 21798944
AT2G29310.1 VIT_06s0004g05320.t01 AT2G29310.1 21798944
AT2G29310.1 VIT_06s0004g05330.t01 AT2G29310.1 21798944
AT2G29310.1 VIT_06s0004g05360.t01 AT2G29310.1 21798944
AT2G29310.1 VIT_06s0004g05370.t01 AT2G29310.1 21798944
AT2G29310.1 VIT_06s0004g05380.t01 AT2G29310.1 21798944
AT2G29310.1 VIT_06s0004g05390.t01 AT2G29310.1 21798944
AT2G29310.1 VIT_06s0004g05400.t01 AT2G29310.1 21798944
AT2G29310.1 VIT_06s0004g05430.t01 AT2G29310.1 21798944
AT2G29310.1 VIT_06s0004g05440.t01 AT2G29310.1 21798944
AT2G29310.1 VIT_06s0004g05450.t01 AT2G29310.1 21798944
AT2G29320.1 VIT_06s0004g05310.t01 AT2G29310.1 21798944
AT2G29320.1 VIT_06s0004g05320.t01 AT2G29310.1 21798944
AT2G29320.1 VIT_06s0004g05330.t01 AT2G29310.1 21798944
AT2G29320.1 VIT_06s0004g05360.t01 AT2G29310.1 21798944
AT2G29320.1 VIT_06s0004g05370.t01 AT2G29310.1 21798944
AT2G29320.1 VIT_06s0004g05380.t01 AT2G29310.1 21798944
AT2G29320.1 VIT_06s0004g05390.t01 AT2G29310.1 21798944
AT2G29320.1 VIT_06s0004g05400.t01 AT2G29310.1 21798944
AT2G29320.1 VIT_06s0004g05430.t01 AT2G29310.1 21798944
AT2G29320.1 VIT_06s0004g05440.t01 AT2G29310.1 21798944
AT2G29320.1 VIT_06s0004g05450.t01 AT2G29310.1 21798944
AT2G29330.1 VIT_06s0004g05310.t01 AT2G29320.1 21798944
AT2G29330.1 VIT_06s0004g05320.t01 AT2G29320.1 21798944
AT2G29330.1 VIT_06s0004g05330.t01 AT2G29320.1 21798944
AT2G29330.1 VIT_06s0004g05360.t01 AT2G29320.1 21798944
AT2G29330.1 VIT_06s0004g05370.t01 AT2G29320.1 21798944
AT2G29330.1 VIT_06s0004g05380.t01 AT2G29320.1 21798944
AT2G29330.1 VIT_06s0004g05390.t01 AT2G29320.1 21798944
AT2G29330.1 VIT_06s0004g05400.t01 AT2G29320.1 21798944
AT2G29330.1 VIT_06s0004g05430.t01 AT2G29320.1 21798944
AT2G29330.1 VIT_06s0004g05440.t01 AT2G29320.1 21798944
AT2G29330.1 VIT_06s0004g05450.t01 AT2G29320.1 21798944
AT2G29340.1 VIT_12s0028g02240.t01 AT2G42580.1 19000166
AT2G29340.1 VIT_18s0001g09830.t01 AT2G42580.1 19000166
AT2G29350.1 VIT_06s0004g05310.t01 AT2G29310.1 21798944
AT2G29350.1 VIT_06s0004g05320.t01 AT2G29310.1 21798944
AT2G29350.1 VIT_06s0004g05330.t01 AT2G29310.1 21798944
AT2G29350.1 VIT_06s0004g05360.t01 AT2G29310.1 21798944
AT2G29350.1 VIT_06s0004g05370.t01 AT2G29310.1 21798944
AT2G29350.1 VIT_06s0004g05380.t01 AT2G29310.1 21798944
AT2G29350.1 VIT_06s0004g05390.t01 AT2G29310.1 21798944
AT2G29350.1 VIT_06s0004g05400.t01 AT2G29310.1 21798944
AT2G29350.1 VIT_06s0004g05430.t01 AT2G29310.1 21798944
AT2G29350.1 VIT_06s0004g05440.t01 AT2G29310.1 21798944
AT2G29350.1 VIT_06s0004g05450.t01 AT2G29310.1 21798944
AT2G29350.1 VIT_06s0004g05310.t01 AT2G29320.1 21798944
AT2G29350.1 VIT_06s0004g05320.t01 AT2G29320.1 21798944
AT2G29350.1 VIT_06s0004g05330.t01 AT2G29320.1 21798944
AT2G29350.1 VIT_06s0004g05360.t01 AT2G29320.1 21798944
AT2G29350.1 VIT_06s0004g05370.t01 AT2G29320.1 21798944
AT2G29350.1 VIT_06s0004g05380.t01 AT2G29320.1 21798944
AT2G29350.1 VIT_06s0004g05390.t01 AT2G29320.1 21798944
AT2G29350.1 VIT_06s0004g05400.t01 AT2G29320.1 21798944
AT2G29350.1 VIT_06s0004g05430.t01 AT2G29320.1 21798944
AT2G29350.1 VIT_06s0004g05440.t01 AT2G29320.1 21798944
AT2G29350.1 VIT_06s0004g05450.t01 AT2G29320.1 21798944
AT2G29350.1 VIT_06s0004g05310.t01 AT2G29350.1 21798944
AT2G29350.1 VIT_06s0004g05320.t01 AT2G29350.1 21798944
AT2G29350.1 VIT_06s0004g05330.t01 AT2G29350.1 21798944
AT2G29350.1 VIT_06s0004g05360.t01 AT2G29350.1 21798944
AT2G29350.1 VIT_06s0004g05370.t01 AT2G29350.1 21798944
AT2G29350.1 VIT_06s0004g05380.t01 AT2G29350.1 21798944
AT2G29350.1 VIT_06s0004g05390.t01 AT2G29350.1 21798944
AT2G29350.1 VIT_06s0004g05400.t01 AT2G29350.1 21798944
AT2G29350.1 VIT_06s0004g05430.t01 AT2G29350.1 21798944
AT2G29350.1 VIT_06s0004g05440.t01 AT2G29350.1 21798944
AT2G29350.1 VIT_06s0004g05450.t01 AT2G29350.1 21798944
AT2G29350.1 VIT_06s0004g05310.t01 AT2G29360.1 21798944
AT2G29350.1 VIT_06s0004g05320.t01 AT2G29360.1 21798944
AT2G29350.1 VIT_06s0004g05330.t01 AT2G29360.1 21798944
AT2G29350.1 VIT_06s0004g05360.t01 AT2G29360.1 21798944
AT2G29350.1 VIT_06s0004g05370.t01 AT2G29360.1 21798944
AT2G29350.1 VIT_06s0004g05380.t01 AT2G29360.1 21798944
AT2G29350.1 VIT_06s0004g05390.t01 AT2G29360.1 21798944
AT2G29350.1 VIT_06s0004g05400.t01 AT2G29360.1 21798944
AT2G29350.1 VIT_06s0004g05430.t01 AT2G29360.1 21798944
AT2G29350.1 VIT_06s0004g05440.t01 AT2G29360.1 21798944
AT2G29350.1 VIT_06s0004g05450.t01 AT2G29360.1 21798944
AT2G29350.1 VIT_13s0019g02130.t01 AT5G06060.1 21798944
AT2G29350.1 VIT_13s0019g02140.t01 AT5G06060.1 21798944
AT2G29350.1 VIT_13s0019g02170.t01 AT5G06060.1 21798944
AT2G29350.1 VIT_13s0019g02180.t01 AT5G06060.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_06s0004g05400.t01 Wine grape cytosol 38.52 93.69
VIT_06s0004g05320.t01 Wine grape endoplasmic reticulum, peroxisome, plastid 87.04 93.25
VIT_06s0004g05310.t01 Wine grape cytosol 38.89 92.92
VIT_06s0004g05380.t01 Wine grape plastid 92.59 92.59
VIT_06s0004g05440.t01 Wine grape cytosol 26.67 87.8
VIT_06s0004g05330.t01 Wine grape peroxisome 82.59 87.8
VIT_06s0004g05450.t01 Wine grape plasma membrane 53.33 80.0
VIT_06s0004g05390.t01 Wine grape cytosol, plasma membrane, plastid 72.22 79.27
VIT_06s0004g05370.t01 Wine grape peroxisome 69.63 74.6
VIT_06s0004g05360.t01 Wine grape cytosol, mitochondrion, plastid 64.81 72.92
VIT_06s0004g05280.t01 Wine grape cytosol, nucleus, peroxisome 65.93 70.63
Solyc03g096650.1.1 Tomato cytosol 22.96 69.66
VIT_13s0019g02180.t01 Wine grape peroxisome, plasma membrane, plastid 67.41 67.91
AT2G29360.1 Thale cress cytosol 65.56 65.31
VIT_13s0019g02130.t01 Wine grape peroxisome 64.81 65.3
Bra030683.1-P Field mustard cytosol, mitochondrion, plastid 63.33 65.27
CDX86486 Canola cytosol, peroxisome, plastid 63.33 65.27
CDY52942 Canola mitochondrion 64.07 65.04
CDY68057 Canola cytosol 62.96 64.89
Bra039755.1-P Field mustard mitochondrion 63.33 64.29
CDY16437 Canola mitochondrion 63.33 64.29
AT1G07450.1 Thale cress cytosol, nucleus, peroxisome 61.85 64.23
Bra027962.1-P Field mustard cytosol 41.11 64.16
CDY64214 Canola mitochondrion 40.37 63.74
CDX86485 Canola cytosol, peroxisome, plastid 61.85 63.74
VIT_08s0007g00900.t01 Wine grape mitochondrion, plastid 61.85 63.74
VIT_08s0007g00890.t01 Wine grape peroxisome 58.89 63.6
AT1G07440.1 Thale cress mitochondrion 62.59 63.53
VIT_13s0019g02140.t01 Wine grape peroxisome 63.7 63.47
AT2G29370.1 Thale cress peroxisome 62.96 63.43
CDY09917 Canola cytosol 61.48 63.36
AT2G29150.1 Thale cress peroxisome 62.59 63.06
Bra031575.1-P Field mustard plastid 61.11 62.98
AT2G29170.1 Thale cress cytosol 24.81 62.62
CDY06260 Canola plastid 60.74 62.6
CDY40186 Canola cytosol 47.78 62.32
Bra018391.1-P Field mustard cytosol 60.37 62.21
CDY45434 Canola cytosol, nucleus, plastid 60.37 62.21
KRH24731 Soybean nucleus 61.48 62.17
AT2G29350.1 Thale cress plastid 61.85 62.08
Bra015580.1-P Field mustard mitochondrion 61.11 62.03
CDY06706 Canola mitochondrion 61.11 62.03
AT2G29290.2 Thale cress plastid 60.0 61.83
Bra018393.1-P Field mustard cytosol 60.0 61.83
Bra018400.1-P Field mustard cytosol, nucleus, plastid 60.0 61.83
CDY31774 Canola cytosol 53.7 61.7
CDY10276 Canola mitochondrion 60.74 61.65
CDY14610 Canola mitochondrion 60.74 61.65
Bra039974.1-P Field mustard cytosol, plasma membrane, plastid 60.0 61.6
AT2G29330.1 Thale cress cytosol, peroxisome, plastid 59.26 61.54
KRH24733 Soybean nucleus 60.37 61.51
AT2G30670.1 Thale cress cytosol, nucleus, peroxisome 59.63 61.45
CDY40175 Canola plasma membrane 59.63 61.45
CDY40188 Canola cytosol, peroxisome, plasma membrane 59.63 61.45
CDY40179 Canola cytosol, peroxisome, plastid 59.26 61.3
CDX97895 Canola cytosol 53.33 61.28
Bra039969.1-P Field mustard cytosol 59.63 61.22
CDY62820 Canola cytosol, endoplasmic reticulum, peroxisome 59.63 61.22
Bra018396.1-P Field mustard cytosol 59.26 61.07
CDY40165 Canola plastid 59.26 61.07
CDY40183 Canola plastid 59.26 61.07
CDY45438 Canola cytosol 59.26 61.07
CDY31772 Canola cytosol, peroxisome, plastid 58.89 60.69
CDY45432 Canola cytosol 58.89 60.69
VIT_08s0007g00920.t01 Wine grape peroxisome 60.0 60.67
CDY72061 Canola cytosol 24.44 60.55
CDX97893 Canola mitochondrion 60.74 60.52
CDY09824 Canola mitochondrion 60.74 60.52
Bra000477.1-P Field mustard plastid 58.52 60.31
Bra039971.1-P Field mustard endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 58.52 60.31
Bra039973.1-P Field mustard plastid 58.52 60.31
CDX83306 Canola plastid 58.52 60.31
CDX95753 Canola cytosol, peroxisome, plastid 58.52 60.31
CDX97899 Canola peroxisome 58.52 60.31
CDY09823 Canola peroxisome 60.37 60.15
AT2G29310.1 Thale cress cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 58.15 59.92
CDY31768 Canola cytosol, peroxisome, plastid 58.15 59.92
CDX95750 Canola cytosol 60.74 59.85
Bra018402.1-P Field mustard cytosol 48.52 59.82
Bra018405.1-P Field mustard cytosol 57.78 59.54
Bra039514.1-P Field mustard cytosol, peroxisome, plastid 57.78 59.54
Bra039967.1-P Field mustard plastid 57.78 59.54
CDY31773 Canola plastid 57.78 59.54
CDY40185 Canola plastid 57.78 59.54
Bra039976.1-P Field mustard cytosol 59.63 59.41
CDY31776 Canola cytosol, peroxisome, plastid 59.63 59.41
CDY45441 Canola cytosol 49.26 59.38
Bra000476.1-P Field mustard cytosol, peroxisome, plastid 57.41 59.16
AT2G29320.1 Thale cress mitochondrion 58.89 59.11
KRH24732 Soybean cytosol, endoplasmic reticulum, plastid 58.89 59.11
Bra018401.1-P Field mustard cytosol 55.19 58.89
CDY40171 Canola cytosol 48.15 58.82
Bra039513.1-P Field mustard peroxisome 57.04 58.78
Bra018404.1-P Field mustard cytosol 40.37 58.6
CDX83307 Canola peroxisome 56.67 58.4
CDY51372 Canola plastid 60.0 58.06
CDX95751 Canola peroxisome 56.3 58.02
Bra018399.1-P Field mustard cytosol, peroxisome, plastid 55.93 57.63
CDX97897 Canola cytosol, extracellular 49.26 57.58
CDY40182 Canola cytosol, peroxisome, plastid 55.56 57.25
CDY45435 Canola cytosol, peroxisome, plastid 55.56 57.25
CDY31770 Canola plastid 48.89 56.9
Bra039977.1-P Field mustard plastid 40.0 55.96
CDY45433 Canola cytosol 50.37 55.51
VIT_13s0019g02170.t01 Wine grape mitochondrion, nucleus, peroxisome, plastid 57.41 54.39
GSMUA_Achr5P04570_001 Banana cytosol 25.56 54.33
CDY16436 Canola endoplasmic reticulum, vacuole 21.11 54.29
AT2G29300.2 Thale cress extracellular 57.04 53.85
Bra039966.1-P Field mustard cytosol 56.3 52.78
CDX95752 Canola cytosol 45.93 52.1
AT2G29340.1 Thale cress cytosol, endoplasmic reticulum, peroxisome 58.52 51.47
KRH29740 Soybean cytosol 18.52 51.02
CDY40177 Canola cytosol 51.48 50.18
CDX97890 Canola cytosol 59.26 47.2
Bra027961.1-P Field mustard cytosol 51.48 45.87
CDY65683 Canola cytosol, mitochondrion 61.85 41.85
CDY31767 Canola plastid 62.59 30.02
VIT_19s0085g00500.t01 Wine grape peroxisome 27.78 25.25
VIT_01s0011g01520.t01 Wine grape peroxisome 27.04 24.58
CDY50145 Canola plastid 60.0 22.38
VIT_14s0128g00340.t01 Wine grape plastid 27.78 21.99
VIT_17s0000g08740.t01 Wine grape cytosol 9.63 21.14
VIT_00s0516g00030.t01 Wine grape cytosol, peroxisome 28.52 7.48
Protein Annotations
EntrezGene:100241521wikigene:100241521EntrezGene:100262098wikigene:100262098EntrezGene:100855239Gene3D:3.40.50.720
MapMan:50.1.1ProteinID:CBI16061ProteinID:CBI16061.3UniProt:D7SK85EMBL:FN594951GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021
GO:GO:0016491GO:GO:0055114EntrezGene:LOC100241521wikigene:LOC100241521EntrezGene:LOC100262098wikigene:LOC100262098
EntrezGene:LOC100855239InterPro:NAD(P)-bd_dom_sfPFAM:PF13561PRINTS:PR00080PRINTS:PR00081ScanProsite:PS00061
PANTHER:PTHR42898PANTHER:PTHR42898:SF2InterPro:SDR_famSUPFAM:SSF51735InterPro:Sc_DH/Rdtase_CSTIGR:TC53716
UniParc:UPI00015C80C8ArrayExpress:VIT_06s0004g05430EnsemblPlantsGene:VIT_06s0004g05430EnsemblPlants:VIT_06s0004g05430.t01unigene:Vvi.6667unigene:Vvi.9141
RefSeq:XP_003632141RefSeq:XP_003632141.1RefSeq:XP_003632186RefSeq:XP_003632186.1RefSeq:XP_010650991.1RefSeq:XP_019076095.1
SEG:seg:::::
Description
No Description!
Coordinates
chr6:+:6295530..6298063
Molecular Weight (calculated)
28821.8 Da
IEP (calculated)
7.994
GRAVY (calculated)
0.086
Length
270 amino acids
Sequence
(BLAST)
001: MAQTSGCSSG DGRWSLKGMT ALVTGGTKGI GHAIVEELAG LGATIHTCSR KETELNECLK DWKAKGFGVS GSVCDVSSRA QREKLMQTIS SVFNGKLNIL
101: INNAAITIQK PTVEVTAEEF STIMAINFES VYHLSQIAHP LLKASGAGSI VFISSVCGIV AHKNISAYSV TKGAMNQLTK NLACEWAEDN IRSNAVAPWY
201: IKTPMVDQML SNKTFLEGVI NRTPLRRVGD PKEVSSVVAF LCLPASSYIT GQTICVDGGM TVNGFEPNLL
Best Arabidopsis Sequence Match ( AT2G29260.1 )
(BLAST)
001: MVLDMASHLY TNPPQNLHFI SSSSSLKPHL CLSFKRINPK HKSSSSSVFV PYASQSSIAI TSKERWSLNG MSALVTGGTR GIGRAIVEEL AGLGAEVHTC
101: ARNEYELENC LSDWNRSGFR VAGSVCDVSD RSQREALMET VSSVFEGKLH ILVNNVGTNI RKPMVEFTAG EFSTLMSTNF ESVFHLCQLA YPLLRESKAG
201: SVVFISSVSG FVSLKNMSVQ SSTKGAINQL TRSLACEWAK DNIRINAVAP WYIKTSMVEQ VLSNKEYLEE VYSVTPLGRL GEPREVSSAV AFLCLPASSY
301: ITGQILCVDG GMSINGFFPR HD
Arabidopsis Description
Tropinone reductase homolog At2g29260, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW12]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.