Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, nucleus
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 3
- plastid 1
- nucleus 1
- peroxisome 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
VIT_06s0004g05400.t01 | Wine grape | cytosol | 38.52 | 93.69 |
VIT_06s0004g05320.t01 | Wine grape | endoplasmic reticulum, peroxisome, plastid | 87.04 | 93.25 |
VIT_06s0004g05310.t01 | Wine grape | cytosol | 38.89 | 92.92 |
VIT_06s0004g05380.t01 | Wine grape | plastid | 92.59 | 92.59 |
VIT_06s0004g05440.t01 | Wine grape | cytosol | 26.67 | 87.8 |
VIT_06s0004g05330.t01 | Wine grape | peroxisome | 82.59 | 87.8 |
VIT_06s0004g05450.t01 | Wine grape | plasma membrane | 53.33 | 80.0 |
VIT_06s0004g05390.t01 | Wine grape | cytosol, plasma membrane, plastid | 72.22 | 79.27 |
VIT_06s0004g05370.t01 | Wine grape | peroxisome | 69.63 | 74.6 |
VIT_06s0004g05360.t01 | Wine grape | cytosol, mitochondrion, plastid | 64.81 | 72.92 |
VIT_06s0004g05280.t01 | Wine grape | cytosol, nucleus, peroxisome | 65.93 | 70.63 |
Solyc03g096650.1.1 | Tomato | cytosol | 22.96 | 69.66 |
VIT_13s0019g02180.t01 | Wine grape | peroxisome, plasma membrane, plastid | 67.41 | 67.91 |
AT2G29360.1 | Thale cress | cytosol | 65.56 | 65.31 |
VIT_13s0019g02130.t01 | Wine grape | peroxisome | 64.81 | 65.3 |
Bra030683.1-P | Field mustard | cytosol, mitochondrion, plastid | 63.33 | 65.27 |
CDX86486 | Canola | cytosol, peroxisome, plastid | 63.33 | 65.27 |
CDY52942 | Canola | mitochondrion | 64.07 | 65.04 |
CDY68057 | Canola | cytosol | 62.96 | 64.89 |
Bra039755.1-P | Field mustard | mitochondrion | 63.33 | 64.29 |
CDY16437 | Canola | mitochondrion | 63.33 | 64.29 |
AT1G07450.1 | Thale cress | cytosol, nucleus, peroxisome | 61.85 | 64.23 |
Bra027962.1-P | Field mustard | cytosol | 41.11 | 64.16 |
CDY64214 | Canola | mitochondrion | 40.37 | 63.74 |
CDX86485 | Canola | cytosol, peroxisome, plastid | 61.85 | 63.74 |
VIT_08s0007g00900.t01 | Wine grape | mitochondrion, plastid | 61.85 | 63.74 |
VIT_08s0007g00890.t01 | Wine grape | peroxisome | 58.89 | 63.6 |
AT1G07440.1 | Thale cress | mitochondrion | 62.59 | 63.53 |
VIT_13s0019g02140.t01 | Wine grape | peroxisome | 63.7 | 63.47 |
AT2G29370.1 | Thale cress | peroxisome | 62.96 | 63.43 |
CDY09917 | Canola | cytosol | 61.48 | 63.36 |
AT2G29150.1 | Thale cress | peroxisome | 62.59 | 63.06 |
Bra031575.1-P | Field mustard | plastid | 61.11 | 62.98 |
AT2G29170.1 | Thale cress | cytosol | 24.81 | 62.62 |
CDY06260 | Canola | plastid | 60.74 | 62.6 |
CDY40186 | Canola | cytosol | 47.78 | 62.32 |
Bra018391.1-P | Field mustard | cytosol | 60.37 | 62.21 |
CDY45434 | Canola | cytosol, nucleus, plastid | 60.37 | 62.21 |
KRH24731 | Soybean | nucleus | 61.48 | 62.17 |
AT2G29350.1 | Thale cress | plastid | 61.85 | 62.08 |
Bra015580.1-P | Field mustard | mitochondrion | 61.11 | 62.03 |
CDY06706 | Canola | mitochondrion | 61.11 | 62.03 |
AT2G29290.2 | Thale cress | plastid | 60.0 | 61.83 |
Bra018393.1-P | Field mustard | cytosol | 60.0 | 61.83 |
Bra018400.1-P | Field mustard | cytosol, nucleus, plastid | 60.0 | 61.83 |
CDY31774 | Canola | cytosol | 53.7 | 61.7 |
CDY10276 | Canola | mitochondrion | 60.74 | 61.65 |
CDY14610 | Canola | mitochondrion | 60.74 | 61.65 |
Bra039974.1-P | Field mustard | cytosol, plasma membrane, plastid | 60.0 | 61.6 |
AT2G29330.1 | Thale cress | cytosol, peroxisome, plastid | 59.26 | 61.54 |
KRH24733 | Soybean | nucleus | 60.37 | 61.51 |
AT2G30670.1 | Thale cress | cytosol, nucleus, peroxisome | 59.63 | 61.45 |
CDY40175 | Canola | plasma membrane | 59.63 | 61.45 |
CDY40188 | Canola | cytosol, peroxisome, plasma membrane | 59.63 | 61.45 |
CDY40179 | Canola | cytosol, peroxisome, plastid | 59.26 | 61.3 |
CDX97895 | Canola | cytosol | 53.33 | 61.28 |
Bra039969.1-P | Field mustard | cytosol | 59.63 | 61.22 |
CDY62820 | Canola | cytosol, endoplasmic reticulum, peroxisome | 59.63 | 61.22 |
Bra018396.1-P | Field mustard | cytosol | 59.26 | 61.07 |
CDY40165 | Canola | plastid | 59.26 | 61.07 |
CDY40183 | Canola | plastid | 59.26 | 61.07 |
CDY45438 | Canola | cytosol | 59.26 | 61.07 |
CDY31772 | Canola | cytosol, peroxisome, plastid | 58.89 | 60.69 |
CDY45432 | Canola | cytosol | 58.89 | 60.69 |
VIT_08s0007g00920.t01 | Wine grape | peroxisome | 60.0 | 60.67 |
CDY72061 | Canola | cytosol | 24.44 | 60.55 |
CDX97893 | Canola | mitochondrion | 60.74 | 60.52 |
CDY09824 | Canola | mitochondrion | 60.74 | 60.52 |
Bra000477.1-P | Field mustard | plastid | 58.52 | 60.31 |
Bra039971.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 58.52 | 60.31 |
Bra039973.1-P | Field mustard | plastid | 58.52 | 60.31 |
CDX83306 | Canola | plastid | 58.52 | 60.31 |
CDX95753 | Canola | cytosol, peroxisome, plastid | 58.52 | 60.31 |
CDX97899 | Canola | peroxisome | 58.52 | 60.31 |
CDY09823 | Canola | peroxisome | 60.37 | 60.15 |
AT2G29310.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 58.15 | 59.92 |
CDY31768 | Canola | cytosol, peroxisome, plastid | 58.15 | 59.92 |
CDX95750 | Canola | cytosol | 60.74 | 59.85 |
Bra018402.1-P | Field mustard | cytosol | 48.52 | 59.82 |
Bra018405.1-P | Field mustard | cytosol | 57.78 | 59.54 |
Bra039514.1-P | Field mustard | cytosol, peroxisome, plastid | 57.78 | 59.54 |
Bra039967.1-P | Field mustard | plastid | 57.78 | 59.54 |
CDY31773 | Canola | plastid | 57.78 | 59.54 |
CDY40185 | Canola | plastid | 57.78 | 59.54 |
Bra039976.1-P | Field mustard | cytosol | 59.63 | 59.41 |
CDY31776 | Canola | cytosol, peroxisome, plastid | 59.63 | 59.41 |
CDY45441 | Canola | cytosol | 49.26 | 59.38 |
Bra000476.1-P | Field mustard | cytosol, peroxisome, plastid | 57.41 | 59.16 |
AT2G29320.1 | Thale cress | mitochondrion | 58.89 | 59.11 |
KRH24732 | Soybean | cytosol, endoplasmic reticulum, plastid | 58.89 | 59.11 |
Bra018401.1-P | Field mustard | cytosol | 55.19 | 58.89 |
CDY40171 | Canola | cytosol | 48.15 | 58.82 |
Bra039513.1-P | Field mustard | peroxisome | 57.04 | 58.78 |
Bra018404.1-P | Field mustard | cytosol | 40.37 | 58.6 |
CDX83307 | Canola | peroxisome | 56.67 | 58.4 |
CDY51372 | Canola | plastid | 60.0 | 58.06 |
CDX95751 | Canola | peroxisome | 56.3 | 58.02 |
Bra018399.1-P | Field mustard | cytosol, peroxisome, plastid | 55.93 | 57.63 |
CDX97897 | Canola | cytosol, extracellular | 49.26 | 57.58 |
CDY40182 | Canola | cytosol, peroxisome, plastid | 55.56 | 57.25 |
CDY45435 | Canola | cytosol, peroxisome, plastid | 55.56 | 57.25 |
CDY31770 | Canola | plastid | 48.89 | 56.9 |
Bra039977.1-P | Field mustard | plastid | 40.0 | 55.96 |
CDY45433 | Canola | cytosol | 50.37 | 55.51 |
VIT_13s0019g02170.t01 | Wine grape | mitochondrion, nucleus, peroxisome, plastid | 57.41 | 54.39 |
GSMUA_Achr5P04570_001 | Banana | cytosol | 25.56 | 54.33 |
CDY16436 | Canola | endoplasmic reticulum, vacuole | 21.11 | 54.29 |
AT2G29300.2 | Thale cress | extracellular | 57.04 | 53.85 |
Bra039966.1-P | Field mustard | cytosol | 56.3 | 52.78 |
CDX95752 | Canola | cytosol | 45.93 | 52.1 |
AT2G29340.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 58.52 | 51.47 |
KRH29740 | Soybean | cytosol | 18.52 | 51.02 |
CDY40177 | Canola | cytosol | 51.48 | 50.18 |
CDX97890 | Canola | cytosol | 59.26 | 47.2 |
Bra027961.1-P | Field mustard | cytosol | 51.48 | 45.87 |
CDY65683 | Canola | cytosol, mitochondrion | 61.85 | 41.85 |
CDY31767 | Canola | plastid | 62.59 | 30.02 |
VIT_19s0085g00500.t01 | Wine grape | peroxisome | 27.78 | 25.25 |
VIT_01s0011g01520.t01 | Wine grape | peroxisome | 27.04 | 24.58 |
CDY50145 | Canola | plastid | 60.0 | 22.38 |
VIT_14s0128g00340.t01 | Wine grape | plastid | 27.78 | 21.99 |
VIT_17s0000g08740.t01 | Wine grape | cytosol | 9.63 | 21.14 |
VIT_00s0516g00030.t01 | Wine grape | cytosol, peroxisome | 28.52 | 7.48 |
Protein Annotations
EntrezGene:100241521 | wikigene:100241521 | EntrezGene:100262098 | wikigene:100262098 | EntrezGene:100855239 | Gene3D:3.40.50.720 |
MapMan:50.1.1 | ProteinID:CBI16061 | ProteinID:CBI16061.3 | UniProt:D7SK85 | EMBL:FN594951 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 |
GO:GO:0016491 | GO:GO:0055114 | EntrezGene:LOC100241521 | wikigene:LOC100241521 | EntrezGene:LOC100262098 | wikigene:LOC100262098 |
EntrezGene:LOC100855239 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 |
PANTHER:PTHR42898 | PANTHER:PTHR42898:SF2 | InterPro:SDR_fam | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS | TIGR:TC53716 |
UniParc:UPI00015C80C8 | ArrayExpress:VIT_06s0004g05430 | EnsemblPlantsGene:VIT_06s0004g05430 | EnsemblPlants:VIT_06s0004g05430.t01 | unigene:Vvi.6667 | unigene:Vvi.9141 |
RefSeq:XP_003632141 | RefSeq:XP_003632141.1 | RefSeq:XP_003632186 | RefSeq:XP_003632186.1 | RefSeq:XP_010650991.1 | RefSeq:XP_019076095.1 |
SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr6:+:6295530..6298063
Molecular Weight (calculated)
28821.8 Da
IEP (calculated)
7.994
GRAVY (calculated)
0.086
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQTSGCSSG DGRWSLKGMT ALVTGGTKGI GHAIVEELAG LGATIHTCSR KETELNECLK DWKAKGFGVS GSVCDVSSRA QREKLMQTIS SVFNGKLNIL
101: INNAAITIQK PTVEVTAEEF STIMAINFES VYHLSQIAHP LLKASGAGSI VFISSVCGIV AHKNISAYSV TKGAMNQLTK NLACEWAEDN IRSNAVAPWY
201: IKTPMVDQML SNKTFLEGVI NRTPLRRVGD PKEVSSVVAF LCLPASSYIT GQTICVDGGM TVNGFEPNLL
101: INNAAITIQK PTVEVTAEEF STIMAINFES VYHLSQIAHP LLKASGAGSI VFISSVCGIV AHKNISAYSV TKGAMNQLTK NLACEWAEDN IRSNAVAPWY
201: IKTPMVDQML SNKTFLEGVI NRTPLRRVGD PKEVSSVVAF LCLPASSYIT GQTICVDGGM TVNGFEPNLL
001: MVLDMASHLY TNPPQNLHFI SSSSSLKPHL CLSFKRINPK HKSSSSSVFV PYASQSSIAI TSKERWSLNG MSALVTGGTR GIGRAIVEEL AGLGAEVHTC
101: ARNEYELENC LSDWNRSGFR VAGSVCDVSD RSQREALMET VSSVFEGKLH ILVNNVGTNI RKPMVEFTAG EFSTLMSTNF ESVFHLCQLA YPLLRESKAG
201: SVVFISSVSG FVSLKNMSVQ SSTKGAINQL TRSLACEWAK DNIRINAVAP WYIKTSMVEQ VLSNKEYLEE VYSVTPLGRL GEPREVSSAV AFLCLPASSY
301: ITGQILCVDG GMSINGFFPR HD
101: ARNEYELENC LSDWNRSGFR VAGSVCDVSD RSQREALMET VSSVFEGKLH ILVNNVGTNI RKPMVEFTAG EFSTLMSTNF ESVFHLCQLA YPLLRESKAG
201: SVVFISSVSG FVSLKNMSVQ SSTKGAINQL TRSLACEWAK DNIRINAVAP WYIKTSMVEQ VLSNKEYLEE VYSVTPLGRL GEPREVSSAV AFLCLPASSY
301: ITGQILCVDG GMSINGFFPR HD
Arabidopsis Description
Tropinone reductase homolog At2g29260, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW12]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.