Factsheet for Bra039966.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018404.1-P	Field mustard	cytosol	51.74	80.11
Bra018402.1-P	Field mustard	cytosol	60.76	79.91
Bra039971.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	70.49	77.48
Bra039973.1-P	Field mustard	plastid	69.44	76.34
Bra018391.1-P	Field mustard	cytosol	69.44	76.34
Bra018405.1-P	Field mustard	cytosol	69.1	75.95
Bra018400.1-P	Field mustard	cytosol, nucleus, plastid	68.75	75.57
Bra039967.1-P	Field mustard	plastid	68.4	75.19
Bra018393.1-P	Field mustard	cytosol	68.06	74.81
Bra018401.1-P	Field mustard	cytosol	65.62	74.7
Bra039513.1-P	Field mustard	peroxisome	67.71	74.43
Bra039514.1-P	Field mustard	cytosol, peroxisome, plastid	67.71	74.43
Bra000477.1-P	Field mustard	plastid	67.36	74.05
Bra000476.1-P	Field mustard	cytosol, peroxisome, plastid	67.36	74.05
Bra039974.1-P	Field mustard	cytosol, plasma membrane, plastid	67.01	73.38
Bra018396.1-P	Field mustard	cytosol	66.67	73.28
Bra039969.1-P	Field mustard	cytosol	66.67	73.0
Bra018399.1-P	Field mustard	cytosol, peroxisome, plastid	65.28	71.76
Bra031575.1-P	Field mustard	plastid	61.46	67.56
Bra030683.1-P	Field mustard	cytosol, mitochondrion, plastid	61.11	67.18
Bra015580.1-P	Field mustard	mitochondrion	61.81	66.92
Bra039755.1-P	Field mustard	mitochondrion	60.07	65.04
Bra039977.1-P	Field mustard	plastid	41.67	62.18
VIT_06s0004g05320.t01	Wine grape	endoplasmic reticulum, peroxisome, plastid	53.82	61.51
VIT_06s0004g05330.t01	Wine grape	peroxisome	53.82	61.02
Bra027962.1-P	Field mustard	cytosol	36.11	60.12
KRH24731	Soybean	nucleus	54.86	59.18
Bra039976.1-P	Field mustard	cytosol	55.56	59.04
VIT_06s0004g05380.t01	Wine grape	plastid	54.86	58.52
VIT_06s0004g05370.t01	Wine grape	peroxisome	51.04	58.33
Bra009159.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	52.78	58.02
Bra028744.1-P	Field mustard	cytosol	52.78	57.79
KRH24733	Soybean	nucleus	52.43	56.98
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	53.12	56.88
VIT_06s0004g05430.t01	Wine grape	mitochondrion, nucleus, peroxisome	52.78	56.3
KRH29740	Soybean	cytosol	19.1	56.12
VIT_06s0004g05400.t01	Wine grape	cytosol	20.83	54.05
Bra027961.1-P	Field mustard	cytosol	56.25	53.47
VIT_06s0004g05310.t01	Wine grape	cytosol	20.83	53.1
VIT_06s0004g05390.t01	Wine grape	cytosol, plasma membrane, plastid	45.14	52.85
Solyc03g096650.1.1	Tomato	cytosol	16.32	52.81
VIT_06s0004g05360.t01	Wine grape	cytosol, mitochondrion, plastid	43.75	52.5
VIT_06s0004g05450.t01	Wine grape	plasma membrane	32.64	52.22
VIT_06s0004g05440.t01	Wine grape	cytosol	13.54	47.56
Bra029705.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	25.35	44.79
CDY31767	Canola	plastid	79.17	40.5
GSMUA_Achr5P04570_001	Banana	cytosol	17.01	38.58
Bra029476.1-P	Field mustard	peroxisome	27.08	30.59
Bra020854.1-P	Field mustard	cytosol, mitochondrion, peroxisome	25.35	28.4
Bra021324.1-P	Field mustard	cytosol	25.0	24.91
Bra034728.1-P	Field mustard	cytosol	21.18	20.75
Bra001471.1-P	Field mustard	peroxisome	20.49	19.8

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	EnsemblPlantsGene:Bra039966	EnsemblPlants:Bra039966.1	EnsemblPlants:Bra039966.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	UniProt:M4FFU2
InterPro:NAD(P)-bd_dom_sf	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR42898
PANTHER:PTHR42898:SF7	InterPro:SDR_fam	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	UniParc:UPI000254422D	SEG:seg

Description

AT2G29300 (E=4e-090) | tropinone reductase, putative / tropine dehydrogenase, putative

Coordinates

chrA04:+:13119944..13121246

Molecular Weight (calculated)

31378.2 Da

IEP (calculated)

7.448

GRAVY (calculated)

0.002

Length

288 amino acids

Sequence
(BLAST)

001: MESSRYDCSC DRWSQRNRVR LSSPFALHHY LTHCSASFQH LDCSKFRFAI VEELAAFGAK VHVCDISETL LNQSLNEWQK KGFQVSGSVC DVSSRPERET
101: LMQTVSSLFG GKLNVLVNNV GGVRAKPTLE YTAEDFSFHI TTNLESAYHL SQLSHPLLKA SGSGSIVFIS SIAGVVSAAN YVSIYSATKG ALNQLARNLA
201: CEWARDGIRA NAVAPNVINT PLSQPFLDDL GLKESLFSRT PLGRAGEPRE VASLVVFLCL PAASYITGQT ICVDGGLTVN GFFYQPQA

Best Arabidopsis Sequence Match ( AT2G29310.2 )
(BLAST)

001: MESTRYDCSC NRCSQWNRCR YAIVEELASF GAIIHICDIS ETLLSQSLSE WEKKGFQVSG SICDVASRPD REKLMQTVSS LFDGKLNILV NNVGVIRGKP
101: TTEYVAEDFS YHISTNLEPA FHFSQLSHLL LKASGFGSIV FMSSATGVVS VQCGSIYSLT KGALNQLTRN LACEWAKDGI RANAVAPNVV KTPLSQSYLE
201: DVGFKEALFS RTPLGRAGEP NEVASLVVFL CLPAASYITG QTICIDGGFT VNAFSYKPQA

Arabidopsis Description

Tropinone reductase homolog At2g29310 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW14]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.