Factsheet for Bra018396.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45438	Canola	cytosol	100.0	100.0
Bra018393.1-P	Field mustard	cytosol	91.98	91.98
Bra018391.1-P	Field mustard	cytosol	84.35	84.35
Bra039969.1-P	Field mustard	cytosol	84.35	84.03
AT2G30670.1	Thale cress	cytosol, nucleus, peroxisome	83.21	83.21
Bra039974.1-P	Field mustard	cytosol, plasma membrane, plastid	83.21	82.89
Bra018400.1-P	Field mustard	cytosol, nucleus, plastid	78.63	78.63
Bra039514.1-P	Field mustard	cytosol, peroxisome, plastid	78.24	78.24
Bra039967.1-P	Field mustard	plastid	77.86	77.86
Bra000476.1-P	Field mustard	cytosol, peroxisome, plastid	77.86	77.86
Bra000477.1-P	Field mustard	plastid	77.48	77.48
Bra018405.1-P	Field mustard	cytosol	77.48	77.48
Bra039971.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	77.48	77.48
Bra039513.1-P	Field mustard	peroxisome	77.1	77.1
Bra039973.1-P	Field mustard	plastid	77.1	77.1
Bra018404.1-P	Field mustard	cytosol	53.05	74.73
Bra018401.1-P	Field mustard	cytosol	72.14	74.7
Bra018402.1-P	Field mustard	cytosol	62.21	74.43
Bra018399.1-P	Field mustard	cytosol, peroxisome, plastid	72.52	72.52
Bra031575.1-P	Field mustard	plastid	69.47	69.47
Bra015580.1-P	Field mustard	mitochondrion	69.47	68.42
Bra039755.1-P	Field mustard	mitochondrion	68.7	67.67
Bra030683.1-P	Field mustard	cytosol, mitochondrion, plastid	67.18	67.18
Bra027962.1-P	Field mustard	cytosol	44.27	67.05
Bra039966.1-P	Field mustard	cytosol	73.28	66.67
VIT_06s0004g05320.t01	Wine grape	endoplasmic reticulum, peroxisome, plastid	59.92	62.3
VIT_06s0004g05400.t01	Wine grape	cytosol	26.34	62.16
VIT_06s0004g05370.t01	Wine grape	peroxisome	59.16	61.51
VIT_06s0004g05380.t01	Wine grape	plastid	62.6	60.74
Solyc03g096650.1.1	Tomato	cytosol	20.61	60.67
Bra039976.1-P	Field mustard	cytosol	62.6	60.52
Bra009159.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	60.31	60.31
VIT_06s0004g05310.t01	Wine grape	cytosol	25.95	60.18
Bra039977.1-P	Field mustard	plastid	44.27	60.1
KRH24731	Soybean	nucleus	61.07	59.93
VIT_06s0004g05440.t01	Wine grape	cytosol	18.7	59.76
Bra028744.1-P	Field mustard	cytosol	59.54	59.32
VIT_06s0004g05430.t01	Wine grape	mitochondrion, nucleus, peroxisome	61.07	59.26
VIT_06s0004g05330.t01	Wine grape	peroxisome	56.49	58.27
KRH24733	Soybean	nucleus	58.78	58.11
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	59.54	57.99
VIT_06s0004g05360.t01	Wine grape	cytosol, mitochondrion, plastid	51.53	56.25
VIT_06s0004g05390.t01	Wine grape	cytosol, plasma membrane, plastid	49.62	52.85
Bra027961.1-P	Field mustard	cytosol	60.31	52.15
VIT_06s0004g05450.t01	Wine grape	plasma membrane	35.11	51.11
KRH29740	Soybean	cytosol	18.7	50.0
GSMUA_Achr5P04570_001	Banana	cytosol	22.52	46.46
Bra029705.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	27.1	43.56
Bra029476.1-P	Field mustard	peroxisome	29.01	29.8
Bra020854.1-P	Field mustard	cytosol, mitochondrion, peroxisome	27.48	28.02
Bra021324.1-P	Field mustard	cytosol	28.24	25.61
Bra034728.1-P	Field mustard	cytosol	24.43	21.77
Bra001471.1-P	Field mustard	peroxisome	23.66	20.81

Protein Annotations

EnsemblPlants:Bra018396.1	EnsemblPlants:Bra018396.1-P	EnsemblPlantsGene:Bra018396	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR42898	PANTHER:PTHR42898:SF7	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	SEG:seg
SUPFAM:SSF51735	UniParc:UPI0002547D6F	UniProt:M4DPF5	MapMan:50.1.1	:	:

Description

AT2G30670 (E=2e-114) | tropinone reductase, putative / tropine dehydrogenase, putative

Coordinates

chrA05:+:7959554..7961536

Molecular Weight (calculated)

27913.6 Da

IEP (calculated)

6.992

GRAVY (calculated)

0.127

Length

262 amino acids

Sequence
(BLAST)

001: MDKRWSLQGM TALVTGGASG IGHAIVEELA SFGAIIHVCD ISETLLNKSL SIWEKKGFQV SGSICDVSSR PERETLMQTV SKMFDGKLSI LVNNVGGIRL
101: KPTTEYVAED FSFHISTNLE SAYHLSQLSH PLLKASGYGS IVMNSSVGGV VSMECGSLYG LSKGAMNQLA RSLACEWATD GIRTNSVAPN FILTDMTAPV
201: LGDACYRKSL FSRTPLGRAG EPKEVASLVA FLCLPAASYI TGQTICVDGG LTVNGFSYQP KP

Best Arabidopsis Sequence Match ( AT2G30670.1 )
(BLAST)

001: MDKRWSLQGM TALVTGGASG IGHAIVEELA GLGARIYVCD ISETLLNQSL SEWEKKGFQV SGSICDVSSH SERETLMQTV SKMFDGKLNI LVNNVGVVNP
101: KPTIEYVAAD FSFSISTNLE SAYHLSQLSH PLLKASEFGS IIFISSVGGV VSMECGSIYS LTKGALNQLA KTLACEWARD GIRANSVAPN FIYTAMAQPF
201: FKDADYEKSL VSRTPLGRAG EPNEVSSLVA FLCLPAASYI TGQTICVDGG LTVNGFSYKP QA

Arabidopsis Description

Tropinone reductase homolog At2g30670 [Source:UniProtKB/Swiss-Prot;Acc:O49332]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.