Factsheet for Bra030683.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

cytosol 3
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68057	Canola	cytosol	98.86	98.86
Bra031575.1-P	Field mustard	plastid	78.63	78.63
Bra018404.1-P	Field mustard	cytosol	50.38	70.97
VIT_06s0004g05440.t01	Wine grape	cytosol	22.14	70.73
Bra039973.1-P	Field mustard	plastid	70.23	70.23
Bra039967.1-P	Field mustard	plastid	69.47	69.47
Bra018402.1-P	Field mustard	cytosol	58.02	69.41
Bra039971.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	69.08	69.08
Bra018405.1-P	Field mustard	cytosol	69.08	69.08
Bra039755.1-P	Field mustard	mitochondrion	69.85	68.8
Bra027962.1-P	Field mustard	cytosol	45.42	68.79
Bra039514.1-P	Field mustard	cytosol, peroxisome, plastid	68.7	68.7
Bra000476.1-P	Field mustard	cytosol, peroxisome, plastid	68.7	68.7
Bra039513.1-P	Field mustard	peroxisome	68.32	68.32
Bra018393.1-P	Field mustard	cytosol	68.32	68.32
Bra015580.1-P	Field mustard	mitochondrion	69.08	68.05
Bra018400.1-P	Field mustard	cytosol, nucleus, plastid	67.94	67.94
VIT_06s0004g05400.t01	Wine grape	cytosol	28.63	67.57
Bra018391.1-P	Field mustard	cytosol	67.56	67.56
Bra000477.1-P	Field mustard	plastid	67.56	67.56
Bra039969.1-P	Field mustard	cytosol	67.56	67.3
Bra018401.1-P	Field mustard	cytosol	64.89	67.19
Bra018396.1-P	Field mustard	cytosol	67.18	67.18
VIT_06s0004g05320.t01	Wine grape	endoplasmic reticulum, peroxisome, plastid	64.12	66.67
Bra039974.1-P	Field mustard	cytosol, plasma membrane, plastid	66.79	66.54
Bra018399.1-P	Field mustard	cytosol, peroxisome, plastid	66.03	66.03
VIT_06s0004g05310.t01	Wine grape	cytosol	28.24	65.49
Solyc03g096650.1.1	Tomato	cytosol	22.14	65.17
Bra039976.1-P	Field mustard	cytosol	67.18	64.94
VIT_06s0004g05370.t01	Wine grape	peroxisome	61.83	64.29
Bra028744.1-P	Field mustard	cytosol	64.12	63.88
VIT_06s0004g05380.t01	Wine grape	plastid	65.65	63.7
VIT_06s0004g05430.t01	Wine grape	mitochondrion, nucleus, peroxisome	65.27	63.33
Bra009159.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	62.98	62.98
KRH24731	Soybean	nucleus	64.12	62.92
VIT_06s0004g05330.t01	Wine grape	peroxisome	59.54	61.42
KRH24733	Soybean	nucleus	61.83	61.13
Bra039966.1-P	Field mustard	cytosol	67.18	61.11
Bra039977.1-P	Field mustard	plastid	44.66	60.62
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	61.07	59.48
VIT_06s0004g05360.t01	Wine grape	cytosol, mitochondrion, plastid	53.82	58.75
KRH29740	Soybean	cytosol	20.99	56.12
VIT_06s0004g05390.t01	Wine grape	cytosol, plasma membrane, plastid	51.53	54.88
Bra027961.1-P	Field mustard	cytosol	61.45	53.14
GSMUA_Achr5P04570_001	Banana	cytosol	25.19	51.97
VIT_06s0004g05450.t01	Wine grape	plasma membrane	35.5	51.67
Bra029705.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	29.39	47.24
Bra029476.1-P	Field mustard	peroxisome	29.77	30.59
Bra020854.1-P	Field mustard	cytosol, mitochondrion, peroxisome	27.1	27.63
Bra021324.1-P	Field mustard	cytosol	29.01	26.3
Bra001471.1-P	Field mustard	peroxisome	24.81	21.81
Bra034728.1-P	Field mustard	cytosol	24.43	21.77

Protein Annotations

EnsemblPlants:Bra030683.1	EnsemblPlants:Bra030683.1-P	EnsemblPlantsGene:Bra030683	Gene3D:3.40.50.720	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	PANTHER:PTHR42898	PANTHER:PTHR42898:SF7	PFAM:PF13561
PRINTS:PR00080	PRINTS:PR00081	SEG:seg	SUPFAM:SSF51735	TMHMM:TMhelix	UniParc:UPI0002546D6B
UniProt:M4EPG3	MapMan:50.1.1	:	:	:	:

Description

AT1G07450 (E=1e-105) | tropinone reductase, putative / tropine dehydrogenase, putative

Coordinates

chrA08:+:20822642..20823885

Molecular Weight (calculated)

28095.7 Da

IEP (calculated)

6.719

GRAVY (calculated)

0.115

Length

262 amino acids

Sequence
(BLAST)

001: MDSRWSLRGM TALVTGGTKG IGYAIVEELA GFGARVHTCA RDQTLLDECL SEWKEKGFQV TGSVCDVSSR AQRDELMKTV SSLFSGKLNI LINNVGTLVS
101: KPTTEFTAQD FSGQIATNLD SAYHFSQLAH PLLKASGFGS IVFLSSVCGV VSSGFVSIYS LTKGCMNQLA RNLACEWASD GIRANSVAPW MTKTPLVQKR
201: LDDEKFAEAI FSRTPLGRAC EPGEVASLVT FLCLPAASYI TGQTICIDGG FTVNGFSCKP EV

Best Arabidopsis Sequence Match ( AT1G07450.1 )
(BLAST)

001: MDINRWSLQG MTALVTGGSK GIGYAIVEEL VGFGARVHIC DIDETLLNEC LSGWHAKGFE VSGSICDVSS RPQRVQLMQT VSSLFGAKLN ILINNVGKYI
101: LKPTLESTAE DFSSLMATNL ESAYYISQLA HPLLKASGNG NIVFISSVTG VVSGTSTIYG VTKGALNQLA RDLACEWASD NIRANSVAPW VTATSLVQKY
201: LEDEIFAEAM FSRTPLGRAC EPREVASLVT FLCLPAASYI TGQTICIDGG FTVNGFSYKP

Arabidopsis Description

Tropinone reductase homolog At1g07450 [Source:UniProtKB/Swiss-Prot;Acc:Q8RX32]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.