Factsheet for Bra018391.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40171	Canola	cytosol	80.15	95.02
Bra018393.1-P	Field mustard	cytosol	85.5	85.5
Bra018396.1-P	Field mustard	cytosol	84.35	84.35
Bra039974.1-P	Field mustard	cytosol, plasma membrane, plastid	83.21	82.89
Bra039969.1-P	Field mustard	cytosol	83.21	82.89
Bra018400.1-P	Field mustard	cytosol, nucleus, plastid	81.3	81.3
Bra039967.1-P	Field mustard	plastid	80.53	80.53
Bra039971.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	80.53	80.53
Bra039514.1-P	Field mustard	cytosol, peroxisome, plastid	79.39	79.39
Bra000477.1-P	Field mustard	plastid	79.01	79.01
Bra039973.1-P	Field mustard	plastid	79.01	79.01
Bra000476.1-P	Field mustard	cytosol, peroxisome, plastid	79.01	79.01
Bra039513.1-P	Field mustard	peroxisome	77.1	77.1
Bra018405.1-P	Field mustard	cytosol	77.1	77.1
Bra018404.1-P	Field mustard	cytosol	54.2	76.34
Bra018402.1-P	Field mustard	cytosol	63.36	75.8
Bra018401.1-P	Field mustard	cytosol	72.52	75.1
Bra018399.1-P	Field mustard	cytosol, peroxisome, plastid	73.28	73.28
Bra039966.1-P	Field mustard	cytosol	76.34	69.44
Bra015580.1-P	Field mustard	mitochondrion	68.7	67.67
Bra030683.1-P	Field mustard	cytosol, mitochondrion, plastid	67.56	67.56
Bra031575.1-P	Field mustard	plastid	66.41	66.41
Bra027962.1-P	Field mustard	cytosol	43.51	65.9
Bra039755.1-P	Field mustard	mitochondrion	66.79	65.79
VIT_06s0004g05320.t01	Wine grape	endoplasmic reticulum, peroxisome, plastid	61.07	63.49
VIT_06s0004g05380.t01	Wine grape	plastid	63.74	61.85
Bra039976.1-P	Field mustard	cytosol	63.36	61.25
Solyc03g096650.1.1	Tomato	cytosol	20.61	60.67
KRH24731	Soybean	nucleus	61.83	60.67
VIT_06s0004g05430.t01	Wine grape	mitochondrion, nucleus, peroxisome	62.21	60.37
VIT_06s0004g05400.t01	Wine grape	cytosol	25.57	60.36
VIT_06s0004g05370.t01	Wine grape	peroxisome	58.02	60.32
Bra009159.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	59.92	59.92
VIT_06s0004g05330.t01	Wine grape	peroxisome	58.02	59.84
Bra028744.1-P	Field mustard	cytosol	59.92	59.7
KRH24733	Soybean	nucleus	60.31	59.62
Bra039977.1-P	Field mustard	plastid	43.89	59.59
VIT_06s0004g05440.t01	Wine grape	cytosol	18.32	58.54
VIT_06s0004g05310.t01	Wine grape	cytosol	25.19	58.41
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	59.16	57.62
VIT_06s0004g05360.t01	Wine grape	cytosol, mitochondrion, plastid	50.38	55.0
VIT_06s0004g05390.t01	Wine grape	cytosol, plasma membrane, plastid	50.76	54.06
VIT_06s0004g05450.t01	Wine grape	plasma membrane	36.26	52.78
KRH29740	Soybean	cytosol	19.08	51.02
Bra027961.1-P	Field mustard	cytosol	58.02	50.16
GSMUA_Achr5P04570_001	Banana	cytosol	21.76	44.88
Bra029705.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	27.86	44.79
Bra029476.1-P	Field mustard	peroxisome	30.53	31.37
Bra020854.1-P	Field mustard	cytosol, mitochondrion, peroxisome	29.01	29.57
Bra021324.1-P	Field mustard	cytosol	28.24	25.61
Bra034728.1-P	Field mustard	cytosol	24.81	22.11
Bra001471.1-P	Field mustard	peroxisome	24.05	21.14

Protein Annotations

EnsemblPlants:Bra018391.1	EnsemblPlants:Bra018391.1-P	EnsemblPlantsGene:Bra018391	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR42898	PANTHER:PTHR42898:SF7	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	SEG:seg
SUPFAM:SSF51735	UniParc:UPI0002547D6A	UniProt:M4DPF0	MapMan:50.1.1	:	:

Description

AT2G29330 (E=6e-111) TRI | TRI (tropinone reductase); binding / catalytic/ oxidoreductase

Coordinates

chrA05:+:7902555..7904004

Molecular Weight (calculated)

27920.6 Da

IEP (calculated)

7.422

GRAVY (calculated)

0.113

Length

262 amino acids

Sequence
(BLAST)

001: MDKRWSLQGM AALVTGGASG IGHAIVDELA GFGARIHVCD ISEILLNQSL NEWEKKGFQV SGSICDVSSR PARETLMQTV SMMFDGKLNI LVNNVGGLRT
101: KPTTEYLADD FSFHISTNLE SAYHLSQLSH PLLKASGFGS IVFISSVGGV VSMEGGSIYC LTKGAINQLA RNLACEWARD NIRANAVAPN FIQTAMAQPL
201: LGNAGYKKSL FNRTPLGRAG EPKEVASLVA FLCLPAASYI TGQTICVDGG LTVNGLSYQQ QA

Best Arabidopsis Sequence Match ( AT2G30670.1 )
(BLAST)

001: MDKRWSLQGM TALVTGGASG IGHAIVEELA GLGARIYVCD ISETLLNQSL SEWEKKGFQV SGSICDVSSH SERETLMQTV SKMFDGKLNI LVNNVGVVNP
101: KPTIEYVAAD FSFSISTNLE SAYHLSQLSH PLLKASEFGS IIFISSVGGV VSMECGSIYS LTKGALNQLA KTLACEWARD GIRANSVAPN FIYTAMAQPF
201: FKDADYEKSL VSRTPLGRAG EPNEVSSLVA FLCLPAASYI TGQTICVDGG LTVNGFSYKP QA

Arabidopsis Description

Tropinone reductase homolog At2g30670 [Source:UniProtKB/Swiss-Prot;Acc:O49332]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.