CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG97856
KRG97857
KRG97870
KRH22291
KRH24731
KRH24732
KRH24733
KRH27037
KRH29740
KRH31007
KRH31021
KRH31025
KRH31026

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G07440.1	KRH24731	AT2G29310.1	21798944
AT1G07440.1	KRH24732	AT2G29310.1	21798944
AT1G07440.1	KRH24733	AT2G29310.1	21798944
AT1G07440.1	KRH29740	AT2G29310.1	21798944
AT1G07450.1	KRH24731	AT2G29320.1	21798944
AT1G07450.1	KRH24732	AT2G29320.1	21798944
AT1G07450.1	KRH24733	AT2G29320.1	21798944
AT1G07450.1	KRH29740	AT2G29320.1	21798944
AT1G07450.1	KRH24731	AT2G29350.1	21798944
AT1G07450.1	KRH24732	AT2G29350.1	21798944
AT1G07450.1	KRH24733	AT2G29350.1	21798944
AT1G07450.1	KRH29740	AT2G29350.1	21798944
AT2G29310.1	KRH24731	AT1G07450.1	21798944
AT2G29310.1	KRH24732	AT1G07450.1	21798944
AT2G29310.1	KRH24733	AT1G07450.1	21798944
AT2G29310.1	KRH29740	AT1G07450.1	21798944
AT2G29310.1	KRH24731	AT2G29310.1	21798944
AT2G29310.1	KRH24732	AT2G29310.1	21798944
AT2G29310.1	KRH24733	AT2G29310.1	21798944
AT2G29310.1	KRH29740	AT2G29310.1	21798944
AT2G29320.1	KRH24731	AT2G29310.1	21798944
AT2G29320.1	KRH24732	AT2G29310.1	21798944
AT2G29320.1	KRH24733	AT2G29310.1	21798944
AT2G29320.1	KRH29740	AT2G29310.1	21798944
AT2G29330.1	KRH24731	AT2G29320.1	21798944
AT2G29330.1	KRH24732	AT2G29320.1	21798944
AT2G29330.1	KRH24733	AT2G29320.1	21798944
AT2G29330.1	KRH29740	AT2G29320.1	21798944
AT2G29340.1	KRH22291	AT2G42580.1	19000166
AT2G29340.1	KRH27037	AT2G42580.1	19000166
AT2G29350.1	KRH24731	AT2G29310.1	21798944
AT2G29350.1	KRH24732	AT2G29310.1	21798944
AT2G29350.1	KRH24733	AT2G29310.1	21798944
AT2G29350.1	KRH29740	AT2G29310.1	21798944
AT2G29350.1	KRH24731	AT2G29320.1	21798944
AT2G29350.1	KRH24732	AT2G29320.1	21798944
AT2G29350.1	KRH24733	AT2G29320.1	21798944
AT2G29350.1	KRH29740	AT2G29320.1	21798944
AT2G29350.1	KRH24731	AT2G29350.1	21798944
AT2G29350.1	KRH24732	AT2G29350.1	21798944
AT2G29350.1	KRH24733	AT2G29350.1	21798944
AT2G29350.1	KRH29740	AT2G29350.1	21798944
AT2G29350.1	KRH24731	AT2G29360.1	21798944
AT2G29350.1	KRH24732	AT2G29360.1	21798944
AT2G29350.1	KRH24733	AT2G29360.1	21798944
AT2G29350.1	KRH29740	AT2G29360.1	21798944
AT2G29350.1	KRG97856	AT5G06060.1	21798944
AT2G29350.1	KRG97857	AT5G06060.1	21798944
AT2G29350.1	KRG97870	AT5G06060.1	21798944
AT2G29350.1	KRH31007	AT5G06060.1	21798944
AT2G29350.1	KRH31021	AT5G06060.1	21798944
AT2G29350.1	KRH31025	AT5G06060.1	21798944
AT2G29350.1	KRH31026	AT5G06060.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g05400.t01	Wine grape	cytosol	47.96	42.34
VIT_06s0004g05310.t01	Wine grape	cytosol	46.94	40.71
Solyc03g096650.1.1	Tomato	cytosol	35.71	39.33
VIT_06s0004g05440.t01	Wine grape	cytosol	31.63	37.8
CDY72061	Canola	cytosol	37.76	33.95
AT2G29170.1	Thale cress	cytosol	36.73	33.64
KRH24731	Soybean	nucleus	86.73	31.84
CDY64214	Canola	mitochondrion	53.06	30.41
Bra027962.1-P	Field mustard	cytosol	53.06	30.06
KRH24733	Soybean	nucleus	79.59	29.43
GSMUA_Achr5P04570_001	Banana	cytosol	37.76	29.13
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	78.57	28.62
CDY40171	Canola	cytosol	51.02	22.62
CDX97895	Canola	cytosol	51.02	21.28
CDY31774	Canola	cytosol	51.02	21.28
AT1G07440.1	Thale cress	mitochondrion	57.14	21.05
Bra030683.1-P	Field mustard	cytosol, mitochondrion, plastid	56.12	20.99
CDX86485	Canola	cytosol, peroxisome, plastid	56.12	20.99
AT2G29360.1	Thale cress	cytosol	57.14	20.66
AT2G29290.2	Thale cress	plastid	55.1	20.61
Bra018400.1-P	Field mustard	cytosol, nucleus, plastid	55.1	20.61
CDY68057	Canola	cytosol	55.1	20.61
CDY45441	Canola	cytosol	46.94	20.54
AT2G29350.1	Thale cress	plastid	56.12	20.45
VIT_06s0004g05360.t01	Wine grape	cytosol, mitochondrion, plastid	50.0	20.42
Bra039976.1-P	Field mustard	cytosol	56.12	20.3
CDY31776	Canola	cytosol, peroxisome, plastid	56.12	20.3
CDY31770	Canola	plastid	47.96	20.26
Bra039973.1-P	Field mustard	plastid	54.08	20.23
CDX86486	Canola	cytosol, peroxisome, plastid	54.08	20.23
CDY45434	Canola	cytosol, nucleus, plastid	54.08	20.23
AT2G29150.1	Thale cress	peroxisome	55.1	20.15
Bra018402.1-P	Field mustard	cytosol	44.9	20.09
CDX97893	Canola	mitochondrion	55.1	19.93
CDY09823	Canola	peroxisome	55.1	19.93
CDY09824	Canola	mitochondrion	55.1	19.93
Bra031575.1-P	Field mustard	plastid	53.06	19.85
Bra039971.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	53.06	19.85
CDY06260	Canola	plastid	53.06	19.85
CDY09917	Canola	cytosol	53.06	19.85
CDY31773	Canola	plastid	53.06	19.85
CDY40182	Canola	cytosol, peroxisome, plastid	53.06	19.85
CDY40183	Canola	plastid	53.06	19.85
CDY45435	Canola	cytosol, peroxisome, plastid	53.06	19.85
AT2G29370.1	Thale cress	peroxisome	54.08	19.78
AT1G07450.1	Thale cress	cytosol, nucleus, peroxisome	52.04	19.62
KRH31007	Soybean	mitochondrion	54.08	19.56
Bra039755.1-P	Field mustard	mitochondrion	53.06	19.55
CDY16437	Canola	mitochondrion	53.06	19.55
CDY52942	Canola	mitochondrion	53.06	19.55
VIT_06s0004g05390.t01	Wine grape	cytosol, plasma membrane, plastid	48.98	19.51
Bra018399.1-P	Field mustard	cytosol, peroxisome, plastid	52.04	19.47
CDY31772	Canola	cytosol, peroxisome, plastid	52.04	19.47
CDY51372	Canola	plastid	55.1	19.35
CDX95750	Canola	cytosol	54.08	19.34
CDX95752	Canola	cytosol	46.94	19.33
AT2G29330.1	Thale cress	cytosol, peroxisome, plastid	51.02	19.23
Bra015580.1-P	Field mustard	mitochondrion	52.04	19.17
CDY06706	Canola	mitochondrion	52.04	19.17
CDY10276	Canola	mitochondrion	52.04	19.17
CDY14610	Canola	mitochondrion	52.04	19.17
Bra039966.1-P	Field mustard	cytosol	56.12	19.1
Bra018391.1-P	Field mustard	cytosol	51.02	19.08
Bra018393.1-P	Field mustard	cytosol	51.02	19.08
Bra039513.1-P	Field mustard	peroxisome	51.02	19.08
CDX83307	Canola	peroxisome	51.02	19.08
CDX95751	Canola	peroxisome	51.02	19.08
CDY40165	Canola	plastid	51.02	19.08
CDY40188	Canola	cytosol, peroxisome, plasma membrane	51.02	19.08
VIT_06s0004g05320.t01	Wine grape	endoplasmic reticulum, peroxisome, plastid	48.98	19.05
VIT_06s0004g05370.t01	Wine grape	peroxisome	48.98	19.05
VIT_06s0004g05330.t01	Wine grape	peroxisome	48.98	18.9
AT2G29310.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	50.0	18.7
AT2G30670.1	Thale cress	cytosol, nucleus, peroxisome	50.0	18.7
Bra000477.1-P	Field mustard	plastid	50.0	18.7
Bra018396.1-P	Field mustard	cytosol	50.0	18.7
Bra039967.1-P	Field mustard	plastid	50.0	18.7
CDX83306	Canola	plastid	50.0	18.7
CDX95753	Canola	cytosol, peroxisome, plastid	50.0	18.7
CDY31768	Canola	cytosol, peroxisome, plastid	50.0	18.7
CDY45432	Canola	cytosol	50.0	18.7
CDY45438	Canola	cytosol	50.0	18.7
Bra039974.1-P	Field mustard	cytosol, plasma membrane, plastid	50.0	18.63
VIT_06s0004g05380.t01	Wine grape	plastid	51.02	18.52
VIT_06s0004g05430.t01	Wine grape	mitochondrion, nucleus, peroxisome	51.02	18.52
KRG97857	Soybean	mitochondrion	46.94	18.4
KRH31026	Soybean	cytosol, mitochondrion, peroxisome, plastid	51.02	18.38
CDY45433	Canola	cytosol	45.92	18.37
CDY40186	Canola	cytosol	38.78	18.36
Bra000476.1-P	Field mustard	cytosol, peroxisome, plastid	48.98	18.32
Bra018405.1-P	Field mustard	cytosol	48.98	18.32
Bra039514.1-P	Field mustard	cytosol, peroxisome, plastid	48.98	18.32
CDX97899	Canola	peroxisome	48.98	18.32
CDY40175	Canola	plasma membrane	48.98	18.32
CDY62820	Canola	cytosol, endoplasmic reticulum, peroxisome	48.98	18.25
KRG97856	Soybean	mitochondrion, plastid	50.0	18.01
CDY40179	Canola	cytosol, peroxisome, plastid	47.96	18.01
CDY40185	Canola	plastid	47.96	17.94
Bra039969.1-P	Field mustard	cytosol	47.96	17.87
AT2G29320.1	Thale cress	mitochondrion	48.98	17.84
KRH00026	Soybean	cytosol, mitochondrion, peroxisome	47.96	17.8
Bra018401.1-P	Field mustard	cytosol	45.92	17.79
KRH49151	Soybean	mitochondrion	47.96	17.74
CDY40177	Canola	cytosol	50.0	17.69
KRH31025	Soybean	plastid	50.0	17.69
AT2G29300.2	Thale cress	extracellular	51.02	17.48
AT2G29340.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	53.06	16.94
KRH29741	Soybean	plastid	53.06	16.94
KRH00030	Soybean	cytosol	45.92	16.92
KRH49153	Soybean	cytosol	44.9	16.54
KRG97870	Soybean	mitochondrion	40.82	16.0
KRH31021	Soybean	mitochondrion	47.96	15.51
KRH49152	Soybean	cytosol	45.92	15.25
Bra027961.1-P	Field mustard	cytosol	46.94	15.18
CDX97890	Canola	cytosol	52.04	15.04
Bra039977.1-P	Field mustard	plastid	28.57	14.51
CDY65683	Canola	cytosol, mitochondrion	53.06	13.03
Bra018404.1-P	Field mustard	cytosol	24.49	12.9
CDX97897	Canola	cytosol, extracellular	29.59	12.55
KRH70902	Soybean	cytosol	12.24	10.91
CDY31767	Canola	plastid	60.2	10.48
KRH49156	Soybean	plastid	16.33	9.36
KRH00029	Soybean	peroxisome	9.18	9.18
KRH00032	Soybean	cytosol, peroxisome, plastid	16.33	8.89
VIT_06s0004g05450.t01	Wine grape	plasma membrane	16.33	8.89
KRH11511	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	22.45	8.63
KRH36525	Soybean	endoplasmic reticulum	22.45	8.63
KRH02005	Soybean	endoplasmic reticulum, nucleus	21.43	8.33
CDY50145	Canola	plastid	50.0	6.77
KRG92837	Soybean	endoplasmic reticulum, nucleus	17.35	5.8
KRH33956	Soybean	endoplasmic reticulum	16.33	5.46
KRH13054	Soybean	nucleus	16.33	5.37
KRH44885	Soybean	nucleus	16.33	5.37
KRH68572	Soybean	cytosol	16.33	5.33
KRH68573	Soybean	cytosol	14.29	5.09
KRG96884	Soybean	cytosol	15.31	5.08
KRH51046	Soybean	cytosol, peroxisome, plastid	16.33	5.02
KRH68615	Soybean	cytosol, nucleus, plastid	9.18	4.07
KRH24734	Soybean	extracellular, plasma membrane, vacuole	2.04	1.75
CDY16436	Canola	endoplasmic reticulum, vacuole	0.0	0.0

Protein Annotations

EMBL:ACUP02006818	EnsemblPlants:KRH29740	EnsemblPlantsGene:GLYMA_11G135600	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR42898	PANTHER:PTHR42898:SF7	PFAM:PF00106	ProteinID:KRH29740	ProteinID:KRH29740.1	SUPFAM:SSF51735
UniParc:UPI000294C983	UniProt:K7LPL6	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr11:-:10317557..10318075

Molecular Weight (calculated)

11067.9 Da

IEP (calculated)

5.065

GRAVY (calculated)

-0.408

Length

98 amino acids

Sequence
(BLAST)

1: MLNCRYTLVH TVHTCARNEA ELNESLNEWN TKGYRVTGSV CDVASRAERQ DLITRFSSQF NGKLNILVNN VGTNVPKQTL DVTEEDFSFL INTNLESA

Best Arabidopsis Sequence Match ( AT1G07440.2 )
(BLAST)

001: MAGAEQSQRW SLKAKTVLVT GGTKGIGHAI VEEFAGFGAV IHTCARNEYE LNECLSKWQK KGFQVTGSVC DASLRPEREK LMQTVSSMFG GKLDILINNL
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGL YTNY

Arabidopsis Description

Tropinone reductase homolog At1g07440 [Source:UniProtKB/Swiss-Prot;Acc:P0DKI3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.