Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45434 | Canola | cytosol, nucleus, plastid | 83.46 | 82.82 |
| CDY40183 | Canola | plastid | 83.46 | 82.82 |
| Bra018400.1-P | Field mustard | cytosol, nucleus, plastid | 83.08 | 82.44 |
| AT2G30670.1 | Thale cress | cytosol, nucleus, peroxisome | 80.77 | 80.15 |
| AT2G29320.1 | Thale cress | mitochondrion | 80.77 | 78.07 |
| AT2G29310.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 77.69 | 77.1 |
| AT1G07450.1 | Thale cress | cytosol, nucleus, peroxisome | 70.0 | 70.0 |
| AT1G07440.1 | Thale cress | mitochondrion | 71.54 | 69.92 |
| AT2G29300.2 | Thale cress | extracellular | 76.54 | 69.58 |
| AT2G29340.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 79.62 | 67.43 |
| AT2G29360.1 | Thale cress | cytosol | 65.77 | 63.1 |
| AT2G29290.2 | Thale cress | plastid | 63.08 | 62.6 |
| AT5G06060.1 | Thale cress | peroxisome | 63.46 | 62.5 |
| VIT_06s0004g05320.t01 | Wine grape | endoplasmic reticulum, peroxisome, plastid | 60.0 | 61.9 |
| AT2G29350.1 | Thale cress | plastid | 63.85 | 61.71 |
| VIT_06s0004g05370.t01 | Wine grape | peroxisome | 59.62 | 61.51 |
| AT2G29370.1 | Thale cress | peroxisome | 63.08 | 61.19 |
| KRH24731 | Soybean | nucleus | 62.69 | 61.05 |
| VIT_06s0004g05380.t01 | Wine grape | plastid | 62.69 | 60.37 |
| VIT_06s0004g05400.t01 | Wine grape | cytosol | 25.77 | 60.36 |
| VIT_06s0004g05440.t01 | Wine grape | cytosol | 18.85 | 59.76 |
| AT2G29150.1 | Thale cress | peroxisome | 61.54 | 59.7 |
| VIT_06s0004g05430.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 61.54 | 59.26 |
| VIT_06s0004g05310.t01 | Wine grape | cytosol | 25.38 | 58.41 |
| KRH24732 | Soybean | cytosol, endoplasmic reticulum, plastid | 60.38 | 58.36 |
| VIT_06s0004g05330.t01 | Wine grape | peroxisome | 56.54 | 57.87 |
| KRH24733 | Soybean | nucleus | 58.85 | 57.74 |
| Solyc03g096650.1.1 | Tomato | cytosol | 19.62 | 57.3 |
| VIT_06s0004g05360.t01 | Wine grape | cytosol, mitochondrion, plastid | 51.15 | 55.42 |
| AT2G29170.1 | Thale cress | cytosol | 21.92 | 53.27 |
| VIT_06s0004g05390.t01 | Wine grape | cytosol, plasma membrane, plastid | 50.0 | 52.85 |
| VIT_06s0004g05450.t01 | Wine grape | plasma membrane | 35.77 | 51.67 |
| KRH29740 | Soybean | cytosol | 19.23 | 51.02 |
| AT2G29260.1 | Thale cress | plastid | 57.69 | 46.58 |
| GSMUA_Achr5P04570_001 | Banana | cytosol | 22.31 | 45.67 |
| AT4G05530.1 | Thale cress | peroxisome | 31.92 | 32.68 |
| AT3G05260.1 | Thale cress | cytosol | 27.31 | 24.57 |
| AT3G12800.1 | Thale cress | peroxisome | 26.54 | 23.15 |
| AT2G07640.1 | Thale cress | mitochondrion | 13.85 | 23.08 |
| AT1G54870.2 | Thale cress | plastid | 27.69 | 21.36 |
| AT1G36580.1 | Thale cress | nucleus | 15.0 | 20.0 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:50.1.1 | EntrezGene:817482 | ProteinID:AAC95205.1 | ProteinID:AEC08235.1 | EMBL:AK227484 |
| ArrayExpress:AT2G29330 | EnsemblPlantsGene:AT2G29330 | RefSeq:AT2G29330 | TAIR:AT2G29330 | RefSeq:AT2G29330-TAIR-G | EnsemblPlants:AT2G29330.1 |
| TAIR:AT2G29330.1 | EMBL:BT005864 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016491 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_180494.1 | PFAM:PF13561 | PO:PO:0001185 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0020100 | PRINTS:PR00080 | PRINTS:PR00081 | PANTHER:PTHR42898 |
| PANTHER:PTHR42898:SF7 | UniProt:Q9ZW16 | InterPro:SDR_fam | SUPFAM:SSF51735 | Symbol:TRI | UniParc:UPI0000060D79 |
Description
TRITropinone reductase homolog At2g29330 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW16]
Coordinates
chr2:+:12594536..12596438
Molecular Weight (calculated)
27663.1 Da
IEP (calculated)
5.682
GRAVY (calculated)
0.145
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKRWSLQGL TALVTGGASG IGHAIVEELA GFGAKIHVCD ISKTLLNQSL SEWEKKGFQV SGSVCDASNR LERETLMQTV TTIFDGKLNI LVNNVGTIRT
101: KPTIEYEAED FSFLISTNLE SAYHLSQLSH PLLKASGNGI ITFISSAAGI VSFDAASIYG LTKGALNQLA RNLACEWAKD GIRANAVAPN FITTALAKPF
201: LEDAGFNEIL SSRTPLGRAG EPREVASLVA FLCLPAASYI TGQTICVDGG LTVNGFSYQP
101: KPTIEYEAED FSFLISTNLE SAYHLSQLSH PLLKASGNGI ITFISSAAGI VSFDAASIYG LTKGALNQLA RNLACEWAKD GIRANAVAPN FITTALAKPF
201: LEDAGFNEIL SSRTPLGRAG EPREVASLVA FLCLPAASYI TGQTICVDGG LTVNGFSYQP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.