Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 1
- peroxisome 1
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G29350.1 | Thale cress | plastid | 82.44 | 80.3 |
| AT2G29150.1 | Thale cress | peroxisome | 77.86 | 76.12 |
| AT2G29360.1 | Thale cress | cytosol | 77.1 | 74.54 |
| AT2G29370.1 | Thale cress | peroxisome | 75.95 | 74.25 |
| Bra039977.1-P | Field mustard | plastid | 53.82 | 73.06 |
| AT2G29170.1 | Thale cress | cytosol | 28.63 | 70.09 |
| CDY51372 | Canola | plastid | 74.05 | 69.53 |
| VIT_06s0004g05400.t01 | Wine grape | cytosol | 28.24 | 66.67 |
| VIT_06s0004g05370.t01 | Wine grape | peroxisome | 63.36 | 65.87 |
| VIT_06s0004g05440.t01 | Wine grape | cytosol | 20.61 | 65.85 |
| AT1G07440.1 | Thale cress | mitochondrion | 66.79 | 65.79 |
| AT1G07450.1 | Thale cress | cytosol, nucleus, peroxisome | 65.27 | 65.77 |
| Solyc03g096650.1.1 | Tomato | cytosol | 22.14 | 65.17 |
| VIT_06s0004g05320.t01 | Wine grape | endoplasmic reticulum, peroxisome, plastid | 62.21 | 64.68 |
| VIT_06s0004g05310.t01 | Wine grape | cytosol | 27.86 | 64.6 |
| AT2G29310.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 64.12 | 64.12 |
| AT5G06060.1 | Thale cress | peroxisome | 63.74 | 63.26 |
| AT2G29330.1 | Thale cress | cytosol, peroxisome, plastid | 62.6 | 63.08 |
| AT2G29320.1 | Thale cress | mitochondrion | 64.5 | 62.83 |
| AT2G30670.1 | Thale cress | cytosol, nucleus, peroxisome | 62.6 | 62.6 |
| VIT_06s0004g05380.t01 | Wine grape | plastid | 64.5 | 62.59 |
| KRH24731 | Soybean | nucleus | 62.98 | 61.8 |
| KRH24733 | Soybean | nucleus | 61.45 | 60.75 |
| VIT_06s0004g05330.t01 | Wine grape | peroxisome | 58.4 | 60.24 |
| VIT_06s0004g05430.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 61.83 | 60.0 |
| VIT_06s0004g05360.t01 | Wine grape | cytosol, mitochondrion, plastid | 54.96 | 60.0 |
| KRH24732 | Soybean | cytosol, endoplasmic reticulum, plastid | 61.45 | 59.85 |
| CDX97890 | Canola | cytosol | 74.81 | 57.82 |
| AT2G29300.2 | Thale cress | extracellular | 61.07 | 55.94 |
| KRH29740 | Soybean | cytosol | 20.61 | 55.1 |
| AT2G29340.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 63.36 | 54.07 |
| VIT_06s0004g05450.t01 | Wine grape | plasma membrane | 36.26 | 52.78 |
| VIT_06s0004g05390.t01 | Wine grape | cytosol, plasma membrane, plastid | 49.24 | 52.44 |
| GSMUA_Achr5P04570_001 | Banana | cytosol | 23.66 | 48.82 |
| AT2G29260.1 | Thale cress | plastid | 59.16 | 48.14 |
| AT4G05530.1 | Thale cress | peroxisome | 30.15 | 31.1 |
| AT3G05260.1 | Thale cress | cytosol | 29.77 | 26.99 |
| AT2G07640.1 | Thale cress | mitochondrion | 14.5 | 24.36 |
| AT3G12800.1 | Thale cress | peroxisome | 27.1 | 23.83 |
| AT1G54870.2 | Thale cress | plastid | 30.53 | 23.74 |
| AT1G36580.1 | Thale cress | nucleus | 16.79 | 22.56 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:50.1.1 | EntrezGene:817478 | UniProt:A0A178VX70 | ProteinID:AAC95208.1 | ProteinID:AEC08228.1 |
| ProteinID:AEC08229.1 | EMBL:AK175125 | ArrayExpress:AT2G29290 | EnsemblPlantsGene:AT2G29290 | RefSeq:AT2G29290 | TAIR:AT2G29290 |
| RefSeq:AT2G29290-TAIR-G | EnsemblPlants:AT2G29290.2 | TAIR:AT2G29290.2 | EMBL:BT010409 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_001118408.1 |
| RefSeq:NP_180490.2 | ProteinID:OAP09422.1 | PFAM:PF13561 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020137 |
| PO:PO:0025022 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | PANTHER:PTHR42898 | PANTHER:PTHR42898:SF7 |
| UniProt:Q9ZW13 | InterPro:SDR_fam | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS | UniParc:UPI00000485AC | : |
Description
Tropinone reductase homolog At2g29290 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW13]
Coordinates
chr2:+:12585856..12588174
Molecular Weight (calculated)
28407.3 Da
IEP (calculated)
5.131
GRAVY (calculated)
0.048
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKRWSLQGM NALVTGGTKG IGEAVVEELS ILGARVHTCA RDETQLQERL REWQEKGFQV TTSICDVSLR EQREKLMETV SSLFQGKLNI LVNNVGTLML
101: KPTTEYTAEE FSFLMATNLD SAFHISQLAH PLLKASGSGS IVLMSSIAGV VHVGVGSIYG ATKGAMNQLA RNLACEWASD NIRTNAICPW LITTPLISDL
201: LSVEEMKKEA EERTPMGRVG EANEVSPLVA FLCLPAASYI TGQVICVDGG LTVNGFSYQP HA
101: KPTTEYTAEE FSFLMATNLD SAFHISQLAH PLLKASGSGS IVLMSSIAGV VHVGVGSIYG ATKGAMNQLA RNLACEWASD NIRTNAICPW LITTPLISDL
201: LSVEEMKKEA EERTPMGRVG EANEVSPLVA FLCLPAASYI TGQVICVDGG LTVNGFSYQP HA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.