Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- endoplasmic reticulum 1
- peroxisome 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039971.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 71.34 | 83.59 |
| CDY31772 | Canola | cytosol, peroxisome, plastid | 71.34 | 83.59 |
| AT2G29320.1 | Thale cress | mitochondrion | 71.99 | 82.16 |
| CDX97899 | Canola | peroxisome | 70.03 | 82.06 |
| AT2G29310.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 69.06 | 80.92 |
| AT2G29330.1 | Thale cress | cytosol, peroxisome, plastid | 67.43 | 79.62 |
| AT2G30670.1 | Thale cress | cytosol, nucleus, peroxisome | 65.47 | 76.72 |
| AT2G29300.2 | Thale cress | extracellular | 69.06 | 74.13 |
| AT1G07440.1 | Thale cress | mitochondrion | 60.91 | 70.3 |
| AT1G07450.1 | Thale cress | cytosol, nucleus, peroxisome | 57.65 | 68.08 |
| AT2G29290.2 | Thale cress | plastid | 54.07 | 63.36 |
| Solyc03g096650.1.1 | Tomato | cytosol | 18.24 | 62.92 |
| KRH24731 | Soybean | nucleus | 54.72 | 62.92 |
| VIT_06s0004g05440.t01 | Wine grape | cytosol | 16.61 | 62.2 |
| VIT_06s0004g05320.t01 | Wine grape | endoplasmic reticulum, peroxisome, plastid | 50.49 | 61.51 |
| AT2G29350.1 | Thale cress | plastid | 53.75 | 61.34 |
| AT2G29370.1 | Thale cress | peroxisome | 53.42 | 61.19 |
| AT2G29360.1 | Thale cress | cytosol | 53.75 | 60.89 |
| VIT_06s0004g05370.t01 | Wine grape | peroxisome | 49.84 | 60.71 |
| VIT_06s0004g05380.t01 | Wine grape | plastid | 53.09 | 60.37 |
| KRH24733 | Soybean | nucleus | 51.79 | 60.0 |
| AT2G29150.1 | Thale cress | peroxisome | 52.12 | 59.7 |
| AT5G06060.1 | Thale cress | peroxisome | 51.14 | 59.47 |
| KRH24732 | Soybean | cytosol, endoplasmic reticulum, plastid | 51.79 | 59.11 |
| VIT_06s0004g05400.t01 | Wine grape | cytosol | 21.17 | 58.56 |
| VIT_06s0004g05430.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 51.47 | 58.52 |
| VIT_06s0004g05310.t01 | Wine grape | cytosol | 21.5 | 58.41 |
| VIT_06s0004g05330.t01 | Wine grape | peroxisome | 47.56 | 57.48 |
| AT2G29170.1 | Thale cress | cytosol | 19.87 | 57.01 |
| VIT_06s0004g05360.t01 | Wine grape | cytosol, mitochondrion, plastid | 43.0 | 55.0 |
| KRH29740 | Soybean | cytosol | 16.94 | 53.06 |
| VIT_06s0004g05390.t01 | Wine grape | cytosol, plasma membrane, plastid | 40.72 | 50.81 |
| VIT_06s0004g05450.t01 | Wine grape | plasma membrane | 28.99 | 49.44 |
| GSMUA_Achr5P04570_001 | Banana | cytosol | 19.22 | 46.46 |
| AT2G29260.1 | Thale cress | plastid | 46.25 | 44.1 |
| AT4G05530.1 | Thale cress | peroxisome | 26.71 | 32.28 |
| AT3G05260.1 | Thale cress | cytosol | 22.48 | 23.88 |
| AT2G07640.1 | Thale cress | mitochondrion | 12.05 | 23.72 |
| AT3G12800.1 | Thale cress | peroxisome | 22.48 | 23.15 |
| AT1G54870.2 | Thale cress | plastid | 23.13 | 21.07 |
| AT1G36580.1 | Thale cress | nucleus | 12.05 | 18.97 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:50.1.1 | EntrezGene:817483 | ProteinID:AAC95204.2 | ProteinID:AEC08236.1 | ProteinID:AEC08237.1 |
| ProteinID:AEC08238.1 | EMBL:AK316672 | ProteinID:ANM61994.1 | ArrayExpress:AT2G29340 | EnsemblPlantsGene:AT2G29340 | RefSeq:AT2G29340 |
| TAIR:AT2G29340 | RefSeq:AT2G29340-TAIR-G | EnsemblPlants:AT2G29340.1 | TAIR:AT2G29340.1 | EMBL:AY035093 | Unigene:At.12679 |
| UniProt:F4IKM1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 |
| GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_001118409.1 | RefSeq:NP_001324177.1 | RefSeq:NP_565680.2 | RefSeq:NP_850131.1 |
| PFAM:PF13561 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PRINTS:PR00080 | PRINTS:PR00081 | PANTHER:PTHR42898 | PANTHER:PTHR42898:SF7 | InterPro:SDR_fam |
| SUPFAM:SSF51735 | UniParc:UPI000034EDC2 | : | : | : | : |
Description
Tropinone reductase homolog At2g29340 [Source:UniProtKB/Swiss-Prot;Acc:F4IKM1]
Coordinates
chr2:+:12597115..12599296
Molecular Weight (calculated)
32901.5 Da
IEP (calculated)
5.393
GRAVY (calculated)
0.167
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKRWSLKGM TALVTGGASG IGYAIVEELA GFGARIHVCD ISEAKLNQSL SEWEKKGFQV SGSVCDVASR PEREELMQTV SSQFDGKLNI LVSNVGVIRS
101: KPTTEYTEDD FAFHISSNVE AAYHFSQLSH PLLKASGYGS IIFVSSIAGV ISFDAGSIYG LTKGALIQLA KNLACEWAKD GIRANAVAPN VINTPLSQSY
201: LEDVSFKKAL LSRTPLGRVG EPNEVASLVA FLCLPAASYI TGQTICVDGG LTVNGFSYQP EEALLSRTSL RRVGEPNEVS SLVVFLCLPA ASYITGQMVK
301: PFVLMEV
101: KPTTEYTEDD FAFHISSNVE AAYHFSQLSH PLLKASGYGS IIFVSSIAGV ISFDAGSIYG LTKGALIQLA KNLACEWAKD GIRANAVAPN VINTPLSQSY
201: LEDVSFKKAL LSRTPLGRVG EPNEVASLVA FLCLPAASYI TGQTICVDGG LTVNGFSYQP EEALLSRTSL RRVGEPNEVS SLVVFLCLPA ASYITGQMVK
301: PFVLMEV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.