Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G29350.1 | Thale cress | plastid | 80.44 | 81.04 |
| AT2G29170.1 | Thale cress | cytosol | 31.73 | 80.37 |
| AT2G29150.1 | Thale cress | peroxisome | 79.34 | 80.22 |
| AT2G29370.1 | Thale cress | peroxisome | 76.38 | 77.24 |
| AT2G29290.2 | Thale cress | plastid | 74.54 | 77.1 |
| VIT_06s0004g05400.t01 | Wine grape | cytosol | 28.04 | 68.47 |
| VIT_06s0004g05440.t01 | Wine grape | cytosol | 20.66 | 68.29 |
| VIT_06s0004g05320.t01 | Wine grape | endoplasmic reticulum, peroxisome, plastid | 63.47 | 68.25 |
| AT1G07450.1 | Thale cress | cytosol, nucleus, peroxisome | 65.31 | 68.08 |
| VIT_06s0004g05380.t01 | Wine grape | plastid | 67.53 | 67.78 |
| VIT_06s0004g05310.t01 | Wine grape | cytosol | 28.04 | 67.26 |
| VIT_06s0004g05370.t01 | Wine grape | peroxisome | 61.99 | 66.67 |
| AT1G07440.1 | Thale cress | mitochondrion | 64.58 | 65.79 |
| AT2G29330.1 | Thale cress | cytosol, peroxisome, plastid | 63.1 | 65.77 |
| VIT_06s0004g05430.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 65.31 | 65.56 |
| AT2G30670.1 | Thale cress | cytosol, nucleus, peroxisome | 63.1 | 65.27 |
| AT5G06060.1 | Thale cress | peroxisome | 62.73 | 64.39 |
| VIT_06s0004g05330.t01 | Wine grape | peroxisome | 60.15 | 64.17 |
| AT2G29310.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 61.99 | 64.12 |
| KRH24731 | Soybean | nucleus | 63.1 | 64.04 |
| KRH24732 | Soybean | cytosol, endoplasmic reticulum, plastid | 62.73 | 63.2 |
| KRH24733 | Soybean | nucleus | 61.62 | 63.02 |
| Solyc03g096650.1.1 | Tomato | cytosol | 20.66 | 62.92 |
| VIT_06s0004g05360.t01 | Wine grape | cytosol, mitochondrion, plastid | 55.72 | 62.92 |
| AT2G29320.1 | Thale cress | mitochondrion | 61.25 | 61.71 |
| VIT_06s0004g05450.t01 | Wine grape | plasma membrane | 38.38 | 57.78 |
| KRH29740 | Soybean | cytosol | 20.66 | 57.14 |
| VIT_06s0004g05390.t01 | Wine grape | cytosol, plasma membrane, plastid | 51.66 | 56.91 |
| AT2G29300.2 | Thale cress | extracellular | 59.41 | 56.29 |
| AT2G29340.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 60.89 | 53.75 |
| AT2G29260.1 | Thale cress | plastid | 60.15 | 50.62 |
| GSMUA_Achr5P04570_001 | Banana | cytosol | 22.88 | 48.82 |
| AT4G05530.1 | Thale cress | peroxisome | 29.52 | 31.5 |
| AT3G05260.1 | Thale cress | cytosol | 28.78 | 26.99 |
| AT2G07640.1 | Thale cress | mitochondrion | 14.39 | 25.0 |
| AT3G12800.1 | Thale cress | peroxisome | 26.94 | 24.5 |
| AT1G54870.2 | Thale cress | plastid | 28.78 | 23.15 |
| AT1G36580.1 | Thale cress | nucleus | 15.87 | 22.05 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:50.1.1 | EntrezGene:817485 | ProteinID:AAC95202.1 | ProteinID:AEC08242.1 | ArrayExpress:AT2G29360 |
| EnsemblPlantsGene:AT2G29360 | RefSeq:AT2G29360 | TAIR:AT2G29360 | RefSeq:AT2G29360-TAIR-G | EnsemblPlants:AT2G29360.1 | TAIR:AT2G29360.1 |
| EMBL:AY045613 | EMBL:AY086609 | EMBL:AY090333 | Unigene:At.12681 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf |
| RefSeq:NP_180497.1 | PFAM:PF13561 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | PANTHER:PTHR42898 |
| PANTHER:PTHR42898:SF7 | UniProt:Q9ZW19 | InterPro:SDR_fam | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS | UniParc:UPI00000485AE |
| SEG:seg | : | : | : | : | : |
Description
SDRTropinone reductase homolog At2g29360 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW19]
Coordinates
chr2:+:12603767..12605299
Molecular Weight (calculated)
29187.0 Da
IEP (calculated)
6.660
GRAVY (calculated)
-0.006
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKTGESLRD KPRWSLVGMT ALVTGGSKGI GEAVVEELAT LGARIHTCAR DETQLQESLR KWQAKGFQVT TSVCDVSSRD KREKLMETVS TIFEGKLNIL
101: VNNVGTCIVK PTLQHTAEDF SFTMATNLES AFHLSQLAHP LLKASGSGSI VLISSVSGVV HVNGASIYGV SKGAMNQLGR NLACEWASDN IRTNSVCPWF
201: IETPLVTESL SNEEFRKEVE SRPPMGRVGE VNEVSSLVAF LCLPAASYIT GQTICVDGGF TVNGFSFKPL P
101: VNNVGTCIVK PTLQHTAEDF SFTMATNLES AFHLSQLAHP LLKASGSGSI VLISSVSGVV HVNGASIYGV SKGAMNQLGR NLACEWASDN IRTNSVCPWF
201: IETPLVTESL SNEEFRKEVE SRPPMGRVGE VNEVSSLVAF LCLPAASYIT GQTICVDGGF TVNGFSFKPL P
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.