Factsheet for VIT_06s0004g05440.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_06s0004g05310.t01
VIT_06s0004g05320.t01
VIT_06s0004g05330.t01
VIT_06s0004g05360.t01
VIT_06s0004g05370.t01
VIT_06s0004g05380.t01
VIT_06s0004g05390.t01
VIT_06s0004g05400.t01
VIT_06s0004g05430.t01
VIT_06s0004g05440.t01
VIT_06s0004g05450.t01
VIT_12s0028g02240.t01
VIT_13s0019g02130.t01
VIT_13s0019g02140.t01
VIT_13s0019g02170.t01
VIT_13s0019g02180.t01
VIT_18s0001g09830.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G07440.1	VIT_06s0004g05310.t01	AT2G29310.1	21798944
AT1G07440.1	VIT_06s0004g05320.t01	AT2G29310.1	21798944
AT1G07440.1	VIT_06s0004g05330.t01	AT2G29310.1	21798944
AT1G07440.1	VIT_06s0004g05360.t01	AT2G29310.1	21798944
AT1G07440.1	VIT_06s0004g05370.t01	AT2G29310.1	21798944
AT1G07440.1	VIT_06s0004g05380.t01	AT2G29310.1	21798944
AT1G07440.1	VIT_06s0004g05390.t01	AT2G29310.1	21798944
AT1G07440.1	VIT_06s0004g05400.t01	AT2G29310.1	21798944
AT1G07440.1	VIT_06s0004g05430.t01	AT2G29310.1	21798944
AT1G07440.1	VIT_06s0004g05440.t01	AT2G29310.1	21798944
AT1G07440.1	VIT_06s0004g05450.t01	AT2G29310.1	21798944
AT1G07450.1	VIT_06s0004g05310.t01	AT2G29320.1	21798944
AT1G07450.1	VIT_06s0004g05320.t01	AT2G29320.1	21798944
AT1G07450.1	VIT_06s0004g05330.t01	AT2G29320.1	21798944
AT1G07450.1	VIT_06s0004g05360.t01	AT2G29320.1	21798944
AT1G07450.1	VIT_06s0004g05370.t01	AT2G29320.1	21798944
AT1G07450.1	VIT_06s0004g05380.t01	AT2G29320.1	21798944
AT1G07450.1	VIT_06s0004g05390.t01	AT2G29320.1	21798944
AT1G07450.1	VIT_06s0004g05400.t01	AT2G29320.1	21798944
AT1G07450.1	VIT_06s0004g05430.t01	AT2G29320.1	21798944
AT1G07450.1	VIT_06s0004g05440.t01	AT2G29320.1	21798944
AT1G07450.1	VIT_06s0004g05450.t01	AT2G29320.1	21798944
AT1G07450.1	VIT_06s0004g05310.t01	AT2G29350.1	21798944
AT1G07450.1	VIT_06s0004g05320.t01	AT2G29350.1	21798944
AT1G07450.1	VIT_06s0004g05330.t01	AT2G29350.1	21798944
AT1G07450.1	VIT_06s0004g05360.t01	AT2G29350.1	21798944
AT1G07450.1	VIT_06s0004g05370.t01	AT2G29350.1	21798944
AT1G07450.1	VIT_06s0004g05380.t01	AT2G29350.1	21798944
AT1G07450.1	VIT_06s0004g05390.t01	AT2G29350.1	21798944
AT1G07450.1	VIT_06s0004g05400.t01	AT2G29350.1	21798944
AT1G07450.1	VIT_06s0004g05430.t01	AT2G29350.1	21798944
AT1G07450.1	VIT_06s0004g05440.t01	AT2G29350.1	21798944
AT1G07450.1	VIT_06s0004g05450.t01	AT2G29350.1	21798944
AT2G29310.1	VIT_06s0004g05310.t01	AT1G07450.1	21798944
AT2G29310.1	VIT_06s0004g05320.t01	AT1G07450.1	21798944
AT2G29310.1	VIT_06s0004g05330.t01	AT1G07450.1	21798944
AT2G29310.1	VIT_06s0004g05360.t01	AT1G07450.1	21798944
AT2G29310.1	VIT_06s0004g05370.t01	AT1G07450.1	21798944
AT2G29310.1	VIT_06s0004g05380.t01	AT1G07450.1	21798944
AT2G29310.1	VIT_06s0004g05390.t01	AT1G07450.1	21798944
AT2G29310.1	VIT_06s0004g05400.t01	AT1G07450.1	21798944
AT2G29310.1	VIT_06s0004g05430.t01	AT1G07450.1	21798944
AT2G29310.1	VIT_06s0004g05440.t01	AT1G07450.1	21798944
AT2G29310.1	VIT_06s0004g05450.t01	AT1G07450.1	21798944
AT2G29310.1	VIT_06s0004g05310.t01	AT2G29310.1	21798944
AT2G29310.1	VIT_06s0004g05320.t01	AT2G29310.1	21798944
AT2G29310.1	VIT_06s0004g05330.t01	AT2G29310.1	21798944
AT2G29310.1	VIT_06s0004g05360.t01	AT2G29310.1	21798944
AT2G29310.1	VIT_06s0004g05370.t01	AT2G29310.1	21798944
AT2G29310.1	VIT_06s0004g05380.t01	AT2G29310.1	21798944
AT2G29310.1	VIT_06s0004g05390.t01	AT2G29310.1	21798944
AT2G29310.1	VIT_06s0004g05400.t01	AT2G29310.1	21798944
AT2G29310.1	VIT_06s0004g05430.t01	AT2G29310.1	21798944
AT2G29310.1	VIT_06s0004g05440.t01	AT2G29310.1	21798944
AT2G29310.1	VIT_06s0004g05450.t01	AT2G29310.1	21798944
AT2G29320.1	VIT_06s0004g05310.t01	AT2G29310.1	21798944
AT2G29320.1	VIT_06s0004g05320.t01	AT2G29310.1	21798944
AT2G29320.1	VIT_06s0004g05330.t01	AT2G29310.1	21798944
AT2G29320.1	VIT_06s0004g05360.t01	AT2G29310.1	21798944
AT2G29320.1	VIT_06s0004g05370.t01	AT2G29310.1	21798944
AT2G29320.1	VIT_06s0004g05380.t01	AT2G29310.1	21798944
AT2G29320.1	VIT_06s0004g05390.t01	AT2G29310.1	21798944
AT2G29320.1	VIT_06s0004g05400.t01	AT2G29310.1	21798944
AT2G29320.1	VIT_06s0004g05430.t01	AT2G29310.1	21798944
AT2G29320.1	VIT_06s0004g05440.t01	AT2G29310.1	21798944
AT2G29320.1	VIT_06s0004g05450.t01	AT2G29310.1	21798944
AT2G29330.1	VIT_06s0004g05310.t01	AT2G29320.1	21798944
AT2G29330.1	VIT_06s0004g05320.t01	AT2G29320.1	21798944
AT2G29330.1	VIT_06s0004g05330.t01	AT2G29320.1	21798944
AT2G29330.1	VIT_06s0004g05360.t01	AT2G29320.1	21798944
AT2G29330.1	VIT_06s0004g05370.t01	AT2G29320.1	21798944
AT2G29330.1	VIT_06s0004g05380.t01	AT2G29320.1	21798944
AT2G29330.1	VIT_06s0004g05390.t01	AT2G29320.1	21798944
AT2G29330.1	VIT_06s0004g05400.t01	AT2G29320.1	21798944
AT2G29330.1	VIT_06s0004g05430.t01	AT2G29320.1	21798944
AT2G29330.1	VIT_06s0004g05440.t01	AT2G29320.1	21798944
AT2G29330.1	VIT_06s0004g05450.t01	AT2G29320.1	21798944
AT2G29340.1	VIT_12s0028g02240.t01	AT2G42580.1	19000166
AT2G29340.1	VIT_18s0001g09830.t01	AT2G42580.1	19000166
AT2G29350.1	VIT_06s0004g05310.t01	AT2G29310.1	21798944
AT2G29350.1	VIT_06s0004g05320.t01	AT2G29310.1	21798944
AT2G29350.1	VIT_06s0004g05330.t01	AT2G29310.1	21798944
AT2G29350.1	VIT_06s0004g05360.t01	AT2G29310.1	21798944
AT2G29350.1	VIT_06s0004g05370.t01	AT2G29310.1	21798944
AT2G29350.1	VIT_06s0004g05380.t01	AT2G29310.1	21798944
AT2G29350.1	VIT_06s0004g05390.t01	AT2G29310.1	21798944
AT2G29350.1	VIT_06s0004g05400.t01	AT2G29310.1	21798944
AT2G29350.1	VIT_06s0004g05430.t01	AT2G29310.1	21798944
AT2G29350.1	VIT_06s0004g05440.t01	AT2G29310.1	21798944
AT2G29350.1	VIT_06s0004g05450.t01	AT2G29310.1	21798944
AT2G29350.1	VIT_06s0004g05310.t01	AT2G29320.1	21798944
AT2G29350.1	VIT_06s0004g05320.t01	AT2G29320.1	21798944
AT2G29350.1	VIT_06s0004g05330.t01	AT2G29320.1	21798944
AT2G29350.1	VIT_06s0004g05360.t01	AT2G29320.1	21798944
AT2G29350.1	VIT_06s0004g05370.t01	AT2G29320.1	21798944
AT2G29350.1	VIT_06s0004g05380.t01	AT2G29320.1	21798944
AT2G29350.1	VIT_06s0004g05390.t01	AT2G29320.1	21798944
AT2G29350.1	VIT_06s0004g05400.t01	AT2G29320.1	21798944
AT2G29350.1	VIT_06s0004g05430.t01	AT2G29320.1	21798944
AT2G29350.1	VIT_06s0004g05440.t01	AT2G29320.1	21798944
AT2G29350.1	VIT_06s0004g05450.t01	AT2G29320.1	21798944
AT2G29350.1	VIT_06s0004g05310.t01	AT2G29350.1	21798944
AT2G29350.1	VIT_06s0004g05320.t01	AT2G29350.1	21798944
AT2G29350.1	VIT_06s0004g05330.t01	AT2G29350.1	21798944
AT2G29350.1	VIT_06s0004g05360.t01	AT2G29350.1	21798944
AT2G29350.1	VIT_06s0004g05370.t01	AT2G29350.1	21798944
AT2G29350.1	VIT_06s0004g05380.t01	AT2G29350.1	21798944
AT2G29350.1	VIT_06s0004g05390.t01	AT2G29350.1	21798944
AT2G29350.1	VIT_06s0004g05400.t01	AT2G29350.1	21798944
AT2G29350.1	VIT_06s0004g05430.t01	AT2G29350.1	21798944
AT2G29350.1	VIT_06s0004g05440.t01	AT2G29350.1	21798944
AT2G29350.1	VIT_06s0004g05450.t01	AT2G29350.1	21798944
AT2G29350.1	VIT_06s0004g05310.t01	AT2G29360.1	21798944
AT2G29350.1	VIT_06s0004g05320.t01	AT2G29360.1	21798944
AT2G29350.1	VIT_06s0004g05330.t01	AT2G29360.1	21798944
AT2G29350.1	VIT_06s0004g05360.t01	AT2G29360.1	21798944
AT2G29350.1	VIT_06s0004g05370.t01	AT2G29360.1	21798944
AT2G29350.1	VIT_06s0004g05380.t01	AT2G29360.1	21798944
AT2G29350.1	VIT_06s0004g05390.t01	AT2G29360.1	21798944
AT2G29350.1	VIT_06s0004g05400.t01	AT2G29360.1	21798944
AT2G29350.1	VIT_06s0004g05430.t01	AT2G29360.1	21798944
AT2G29350.1	VIT_06s0004g05440.t01	AT2G29360.1	21798944
AT2G29350.1	VIT_06s0004g05450.t01	AT2G29360.1	21798944
AT2G29350.1	VIT_13s0019g02130.t01	AT5G06060.1	21798944
AT2G29350.1	VIT_13s0019g02140.t01	AT5G06060.1	21798944
AT2G29350.1	VIT_13s0019g02170.t01	AT5G06060.1	21798944
AT2G29350.1	VIT_13s0019g02180.t01	AT5G06060.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g05400.t01	Wine grape	cytosol	90.24	66.67
VIT_06s0004g05310.t01	Wine grape	cytosol	87.8	63.72
Solyc03g096650.1.1	Tomato	cytosol	64.63	59.55
AT2G29170.1	Thale cress	cytosol	67.07	51.4
CDY72061	Canola	cytosol	68.29	51.38
GSMUA_Achr5P04570_001	Banana	cytosol	62.2	40.16
CDY64214	Canola	mitochondrion	68.29	32.75
Bra027962.1-P	Field mustard	cytosol	68.29	32.37
KRH29740	Soybean	cytosol	37.8	31.63
VIT_06s0004g05320.t01	Wine grape	endoplasmic reticulum, peroxisome, plastid	87.8	28.57
VIT_06s0004g05380.t01	Wine grape	plastid	89.02	27.04
VIT_06s0004g05430.t01	Wine grape	mitochondrion, nucleus, peroxisome	87.8	26.67
VIT_06s0004g05370.t01	Wine grape	peroxisome	78.05	25.4
VIT_06s0004g05360.t01	Wine grape	cytosol, mitochondrion, plastid	73.17	25.0
VIT_06s0004g05390.t01	Wine grape	cytosol, plasma membrane, plastid	74.39	24.8
VIT_06s0004g05330.t01	Wine grape	peroxisome	75.61	24.41
CDY40186	Canola	cytosol	60.98	24.15
CDY40171	Canola	cytosol	62.2	23.08
Bra030683.1-P	Field mustard	cytosol, mitochondrion, plastid	70.73	22.14
VIT_08s0007g00890.t01	Wine grape	peroxisome	67.07	22.0
VIT_06s0004g05280.t01	Wine grape	cytosol, nucleus, peroxisome	67.07	21.83
CDX86486	Canola	cytosol, peroxisome, plastid	69.51	21.76
CDY68057	Canola	cytosol	69.51	21.76
CDX86485	Canola	cytosol, peroxisome, plastid	68.29	21.37
AT2G29150.1	Thale cress	peroxisome	69.51	21.27
VIT_13s0019g02130.t01	Wine grape	peroxisome	69.51	21.27
VIT_13s0019g02180.t01	Wine grape	peroxisome, plasma membrane, plastid	69.51	21.27
Bra039755.1-P	Field mustard	mitochondrion	68.29	21.05
CDY16437	Canola	mitochondrion	68.29	21.05
CDY52942	Canola	mitochondrion	68.29	21.05
VIT_13s0019g02140.t01	Wine grape	peroxisome	69.51	21.03
CDY31774	Canola	cytosol	59.76	20.85
CDY31770	Canola	plastid	58.54	20.69
AT1G07440.1	Thale cress	mitochondrion	67.07	20.68
Bra015580.1-P	Field mustard	mitochondrion	67.07	20.68
CDY06706	Canola	mitochondrion	67.07	20.68
AT2G29360.1	Thale cress	cytosol	68.29	20.66
CDX97893	Canola	mitochondrion	68.29	20.66
CDY09823	Canola	peroxisome	68.29	20.66
CDY09824	Canola	mitochondrion	68.29	20.66
AT2G29290.2	Thale cress	plastid	65.85	20.61
CDY45434	Canola	cytosol, nucleus, plastid	65.85	20.61
VIT_08s0007g00900.t01	Wine grape	mitochondrion, plastid	65.85	20.61
AT2G29350.1	Thale cress	plastid	67.07	20.45
CDX95750	Canola	cytosol	68.29	20.44
CDX97895	Canola	cytosol	58.54	20.43
Bra018400.1-P	Field mustard	cytosol, nucleus, plastid	64.63	20.23
AT2G29370.1	Thale cress	peroxisome	65.85	20.15
AT1G07450.1	Thale cress	cytosol, nucleus, peroxisome	63.41	20.0
VIT_13s0019g02170.t01	Wine grape	mitochondrion, nucleus, peroxisome, plastid	69.51	20.0
Bra039976.1-P	Field mustard	cytosol	65.85	19.93
CDY31776	Canola	cytosol, peroxisome, plastid	65.85	19.93
CDY10276	Canola	mitochondrion	64.63	19.92
CDY14610	Canola	mitochondrion	64.63	19.92
CDY09917	Canola	cytosol	63.41	19.85
CDX95752	Canola	cytosol	57.32	19.75
KRH24733	Soybean	nucleus	63.41	19.62
CDY45433	Canola	cytosol	58.54	19.59
KRH24731	Soybean	nucleus	63.41	19.48
CDY40183	Canola	plastid	62.2	19.47
CDY40179	Canola	cytosol, peroxisome, plastid	60.98	19.16
VIT_08s0007g00920.t01	Wine grape	peroxisome	62.2	19.1
AT2G30670.1	Thale cress	cytosol, nucleus, peroxisome	60.98	19.08
Bra018393.1-P	Field mustard	cytosol	60.98	19.08
Bra031575.1-P	Field mustard	plastid	60.98	19.08
CDX97899	Canola	peroxisome	60.98	19.08
CDY06260	Canola	plastid	60.98	19.08
CDY40185	Canola	plastid	60.98	19.08
CDY40188	Canola	cytosol, peroxisome, plasma membrane	60.98	19.08
CDY45432	Canola	cytosol	60.98	19.08
Bra018401.1-P	Field mustard	cytosol	58.54	18.97
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	62.2	18.96
AT2G29330.1	Thale cress	cytosol, peroxisome, plastid	59.76	18.85
Bra018396.1-P	Field mustard	cytosol	59.76	18.7
CDY31772	Canola	cytosol, peroxisome, plastid	59.76	18.7
CDY45438	Canola	cytosol	59.76	18.7
CDY51372	Canola	plastid	63.41	18.64
CDY62820	Canola	cytosol, endoplasmic reticulum, peroxisome	59.76	18.63
AT2G29310.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	58.54	18.32
Bra018391.1-P	Field mustard	cytosol	58.54	18.32
Bra039513.1-P	Field mustard	peroxisome	58.54	18.32
CDX83307	Canola	peroxisome	58.54	18.32
Bra039969.1-P	Field mustard	cytosol	58.54	18.25
AT2G29320.1	Thale cress	mitochondrion	59.76	18.22
CDY40177	Canola	cytosol	60.98	18.05
Bra000476.1-P	Field mustard	cytosol, peroxisome, plastid	57.32	17.94
Bra018405.1-P	Field mustard	cytosol	57.32	17.94
Bra039514.1-P	Field mustard	cytosol, peroxisome, plastid	57.32	17.94
Bra039971.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	57.32	17.94
Bra039973.1-P	Field mustard	plastid	57.32	17.94
CDY40165	Canola	plastid	57.32	17.94
CDY40175	Canola	plasma membrane	57.32	17.94
Bra039974.1-P	Field mustard	cytosol, plasma membrane, plastid	57.32	17.87
AT2G29300.2	Thale cress	extracellular	62.2	17.83
Bra000477.1-P	Field mustard	plastid	56.1	17.56
Bra018399.1-P	Field mustard	cytosol, peroxisome, plastid	56.1	17.56
CDX83306	Canola	plastid	56.1	17.56
CDX95751	Canola	peroxisome	56.1	17.56
CDX95753	Canola	cytosol, peroxisome, plastid	56.1	17.56
CDY31768	Canola	cytosol, peroxisome, plastid	56.1	17.56
CDY31773	Canola	plastid	56.1	17.56
CDY40182	Canola	cytosol, peroxisome, plastid	56.1	17.56
Bra039967.1-P	Field mustard	plastid	54.88	17.18
CDY45435	Canola	cytosol, peroxisome, plastid	54.88	17.18
AT2G29340.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	62.2	16.61
CDX97890	Canola	cytosol	63.41	15.34
CDY65683	Canola	cytosol, mitochondrion	68.29	14.04
Bra039966.1-P	Field mustard	cytosol	47.56	13.54
CDX97897	Canola	cytosol, extracellular	37.8	13.42
CDY45441	Canola	cytosol	32.93	12.05
Bra027961.1-P	Field mustard	cytosol	43.9	11.88
Bra018402.1-P	Field mustard	cytosol	30.49	11.42
CDY31767	Canola	plastid	63.41	9.24
VIT_19s0085g00500.t01	Wine grape	peroxisome	30.49	8.42
VIT_01s0011g01520.t01	Wine grape	peroxisome	29.27	8.08
VIT_14s0128g00340.t01	Wine grape	plastid	28.05	6.74
CDY50145	Canola	plastid	56.1	6.35
Bra039977.1-P	Field mustard	plastid	12.2	5.18
Bra018404.1-P	Field mustard	cytosol	10.98	4.84
VIT_00s0516g00030.t01	Wine grape	cytosol, peroxisome	35.37	2.82
VIT_06s0004g05450.t01	Wine grape	plasma membrane	3.66	1.67
CDY16436	Canola	endoplasmic reticulum, vacuole	0.0	0.0
VIT_17s0000g08740.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

ArrayExpress:VIT_06s0004g05440	EMBL:FN594951	EnsemblPlants:VIT_06s0004g05440.t01	EnsemblPlantsGene:VIT_06s0004g05440	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf
InterPro:SDR_fam	PANTHER:PTHR42898	PANTHER:PTHR42898:SF2	PFAM:PF00106	ProteinID:CBI16060	ProteinID:CBI16060.3
SUPFAM:SSF51735	UniParc:UPI00015C80C7	UniProt:D7SK84	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr6:+:6301524..6301855

Molecular Weight (calculated)

8779.8 Da

IEP (calculated)

9.474

GRAVY (calculated)

-0.138

Length

82 amino acids

Sequence
(BLAST)

1: MTALVTGGTK GIGHKIVEEL AGLGATIHTC SRKETKLNEC LKDWKAKGFG VTGSVLDVSC RAQREKLMET VPSVFNGKMN IS

Best Arabidopsis Sequence Match ( AT2G29170.1 )
(BLAST)

001: MAKAEENLRD KCRWSLGGMT ALVTGGSKGL GEAVVEELAM LGARVHTCAR NETQLQECVR EWQAKGFEVT TSVCDVSSRD QREKLMENVA SIFQGKLNIL
101: VSLCIRA

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:TAIR;Acc:AT2G29170]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.