Factsheet for VIT_08s0007g00900.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0007g00920.t01	Wine grape	peroxisome	78.63	77.15
VIT_06s0004g05310.t01	Wine grape	cytosol	29.77	69.03
VIT_06s0004g05400.t01	Wine grape	cytosol	29.01	68.47
VIT_08s0007g00890.t01	Wine grape	peroxisome	64.89	68.0
VIT_06s0004g05320.t01	Wine grape	endoplasmic reticulum, peroxisome, plastid	63.74	66.27
VIT_06s0004g05440.t01	Wine grape	cytosol	20.61	65.85
VIT_06s0004g05380.t01	Wine grape	plastid	66.03	64.07
Solyc09g011140.2.1	Tomato	cytosol	65.65	63.7
Solyc09g011130.1.1	Tomato	plastid	63.74	63.5
PGSC0003DMT400022974	Potato	peroxisome	65.27	63.33
KRH00026	Soybean	cytosol, mitochondrion, peroxisome	62.98	62.5
VIT_13s0019g02180.t01	Wine grape	peroxisome, plasma membrane, plastid	63.74	62.31
VIT_06s0004g05370.t01	Wine grape	peroxisome	59.92	62.3
VIT_06s0004g05280.t01	Wine grape	cytosol, nucleus, peroxisome	59.92	62.3
VIT_06s0004g05430.t01	Wine grape	mitochondrion, nucleus, peroxisome	63.74	61.85
KRH00029	Soybean	peroxisome	22.9	61.22
VIT_06s0004g05330.t01	Wine grape	peroxisome	59.16	61.02
VIT_13s0019g02130.t01	Wine grape	peroxisome	61.83	60.45
Solyc10g081560.1.1	Tomato	cytosol, nucleus, peroxisome	60.31	59.85
PGSC0003DMT400072533	Potato	peroxisome	60.31	59.85
PGSC0003DMT400015320	Potato	peroxisome	59.16	59.39
PGSC0003DMT400053141	Potato	mitochondrion, peroxisome, plastid	59.54	59.32
Solyc04g007400.2.1	Tomato	cytosol	58.4	58.62
VIT_13s0019g02140.t01	Wine grape	peroxisome	60.31	58.3
Solyc04g054950.2.1	Tomato	mitochondrion, peroxisome, plastid	58.4	58.17
KRH00030	Soybean	cytosol	58.02	57.14
KRH49151	Soybean	mitochondrion	57.25	56.6
KRH49153	Soybean	cytosol	57.25	56.39
VIT_06s0004g05360.t01	Wine grape	cytosol, mitochondrion, plastid	50.76	55.42
KRH49156	Soybean	plastid	35.88	54.97
VIT_06s0004g05450.t01	Wine grape	plasma membrane	37.02	53.89
VIT_06s0004g05390.t01	Wine grape	cytosol, plasma membrane, plastid	50.38	53.66
VIT_13s0019g02170.t01	Wine grape	mitochondrion, nucleus, peroxisome, plastid	56.87	52.28
KRH49152	Soybean	cytosol	57.63	51.19
PGSC0003DMT400022973	Potato	peroxisome	66.79	47.04
KRH00032	Soybean	cytosol, peroxisome, plastid	32.06	46.67
VIT_19s0085g00500.t01	Wine grape	peroxisome	29.01	25.59
VIT_17s0000g08740.t01	Wine grape	cytosol	11.45	24.39
VIT_01s0011g01520.t01	Wine grape	peroxisome	27.1	23.91
VIT_14s0128g00340.t01	Wine grape	plastid	29.77	22.87
VIT_00s0516g00030.t01	Wine grape	cytosol, peroxisome	27.48	7.0

Protein Annotations

EntrezGene:100254617	wikigene:100254617	Gene3D:3.40.50.720	MapMan:50.1.1	ProteinID:CCB55564	ProteinID:CCB55564.1
UniProt:F6HL77	EMBL:FN595991	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114	EntrezGene:LOC100254617
wikigene:LOC100254617	InterPro:NAD(P)-bd_dom_sf	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061
PANTHER:PTHR42898	PANTHER:PTHR42898:SF15	InterPro:SDR_fam	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	TMHMM:TMhelix
UniParc:UPI00015C92A1	ArrayExpress:VIT_08s0007g00900	EnsemblPlantsGene:VIT_08s0007g00900	EnsemblPlants:VIT_08s0007g00900.t01	RefSeq:XP_002271432	RefSeq:XP_002271432.1

Description

No Description!

Coordinates

chr8:+:15068975..15071414

Molecular Weight (calculated)

28322.0 Da

IEP (calculated)

7.807

GRAVY (calculated)

0.031

Length

262 amino acids

Sequence
(BLAST)

001: MSSRNSRWSL QGTTALVTGG TRGIGHAIVE ELAAFGATVH TCSRNQKELD EMLQVWKSKG FKVSGSVCDV SSRPQRTQLM DTVSSLFDGK LNILVNNAGT
101: VISKRTEEYT VEDVSIIMGT NFESAYHLSQ LGYPLLKASG RGSIVFISSV AGVMALPVIS IYAASKGAMN QVTRNLACEW AEDNIRVNTI APWVINTSLI
201: HKAKDDPSSE EKIKRIISRT PICRMGEPDE VSSLVAFLCF PAASYITGQV ICVDGGYSVT GF

Best Arabidopsis Sequence Match ( AT1G07440.1 )
(BLAST)

001: MAGAEQSQRW SLKAKTVLVT GGTKGIGHAI VEEFAGFGAV IHTCARNEYE LNECLSKWQK KGFQVTGSVC DASLRPEREK LMQTVSSMFG GKLDILINNL
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG

Arabidopsis Description

Tropinone reductase homolog At1g07440 [Source:UniProtKB/Swiss-Prot;Acc:P0DKI3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.