CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH00030	Soybean	cytosol	83.83	83.83
KRH49156	Soybean	plastid	46.24	71.93
KRH00026	Soybean	cytosol, mitochondrion, peroxisome	70.3	70.83
KRH00029	Soybean	peroxisome	25.94	70.41
KRH49151	Soybean	mitochondrion	65.04	65.28
KRH49152	Soybean	cytosol	68.05	61.36
VIT_08s0007g00920.t01	Wine grape	peroxisome	57.52	57.3
VIT_08s0007g00900.t01	Wine grape	mitochondrion, plastid	56.39	57.25
KRH24731	Soybean	nucleus	56.77	56.55
Solyc09g011130.1.1	Tomato	plastid	54.89	55.51
KRH00032	Soybean	cytosol, peroxisome, plastid	37.22	55.0
Solyc10g081560.1.1	Tomato	cytosol, nucleus, peroxisome	53.76	54.17
PGSC0003DMT400022974	Potato	peroxisome	54.89	54.07
Solyc09g011140.2.1	Tomato	cytosol	54.89	54.07
KRH24733	Soybean	nucleus	53.76	53.96
KRH31026	Soybean	cytosol, mitochondrion, peroxisome, plastid	54.51	53.31
PGSC0003DMT400072533	Potato	peroxisome	52.63	53.03
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	53.38	52.79
PGSC0003DMT400053141	Potato	mitochondrion, peroxisome, plastid	51.88	52.47
KRG97856	Soybean	mitochondrion, plastid	53.38	52.21
Solyc04g054950.2.1	Tomato	mitochondrion, peroxisome, plastid	51.13	51.71
KRH31007	Soybean	mitochondrion	51.88	50.92
KRH31025	Soybean	plastid	52.63	50.54
PGSC0003DMT400015320	Potato	peroxisome	48.5	49.43
KRG97870	Soybean	mitochondrion	46.24	49.2
Solyc04g007400.2.1	Tomato	cytosol	48.12	49.04
KRH31021	Soybean	mitochondrion	53.76	47.19
KRH29741	Soybean	plastid	53.76	46.58
KRG97857	Soybean	mitochondrion	43.23	46.0
KRH24734	Soybean	extracellular, plasma membrane, vacuole	19.55	45.61
KRH29740	Soybean	cytosol	16.54	44.9
PGSC0003DMT400022973	Potato	peroxisome	54.89	39.25
KRH02005	Soybean	endoplasmic reticulum, nucleus	33.46	35.32
KRH11511	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	30.83	32.16
KRH36525	Soybean	endoplasmic reticulum	30.45	31.76
KRH70902	Soybean	cytosol	12.41	30.0
KRH33956	Soybean	endoplasmic reticulum	26.32	23.89
KRG92837	Soybean	endoplasmic reticulum, nucleus	26.32	23.89
KRH44885	Soybean	nucleus	26.32	23.49
KRG96884	Soybean	cytosol	25.56	23.05
KRH13054	Soybean	nucleus	25.56	22.82
KRH68572	Soybean	cytosol	25.19	22.33
KRH51046	Soybean	cytosol, peroxisome, plastid	25.56	21.32
KRH68573	Soybean	cytosol	21.43	20.73
KRH68615	Soybean	cytosol, nucleus, plastid	16.92	20.36

Protein Annotations

EMBL:ACUP02004334	EnsemblPlants:KRH49153	EnsemblPlantsGene:GLYMA_07G136200	EntrezGene:100804946	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf
InterPro:SDR_fam	PANTHER:PTHR42898	PANTHER:PTHR42898:SF13	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081
ProteinID:KRH49153	ProteinID:KRH49153.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0002338D8E	UniProt:I1KK27
MapMan:50.1.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:16129127..16133685

Molecular Weight (calculated)

28642.6 Da

IEP (calculated)

7.061

GRAVY (calculated)

0.042

Length

266 amino acids

Sequence
(BLAST)

001: MAKTKLSCIK DERWSLHGMT ALVTGATRGI GHAIAEELAE FGAVVHICAR KQQDIDRCLE EWSKKEFRIT GSACDVLYRD QRENLMKNVA SIFHGKLNIL
101: INNTGTNTPK NLIDYTAEDV TTIMGTNFES SYHLCQLAHP LLKASGYGSI VFISSIAGLK ALPLCSIYGP SKGAMNQLTK NIALEWAKDN IRANTVAPGP
201: VKTLLLDSFV KSGNEADKAI EAIVSQAPAG RLGDPEDISA MVAFLCLPAA SFITGQIINV DGGCTI

Best Arabidopsis Sequence Match ( AT1G07440.1 )
(BLAST)

001: MAGAEQSQRW SLKAKTVLVT GGTKGIGHAI VEEFAGFGAV IHTCARNEYE LNECLSKWQK KGFQVTGSVC DASLRPEREK LMQTVSSMFG GKLDILINNL
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG

Arabidopsis Description

Tropinone reductase homolog At1g07440 [Source:UniProtKB/Swiss-Prot;Acc:P0DKI3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.