CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49153	Soybean	cytosol	83.83	83.83
KRH49156	Soybean	plastid	46.62	72.51
KRH00026	Soybean	cytosol, mitochondrion, peroxisome	71.8	72.35
KRH00029	Soybean	peroxisome	26.32	71.43
KRH49151	Soybean	mitochondrion	66.54	66.79
KRH49152	Soybean	cytosol	72.56	65.42
VIT_08s0007g00920.t01	Wine grape	peroxisome	60.15	59.93
VIT_08s0007g00900.t01	Wine grape	mitochondrion, plastid	57.14	58.02
KRH24731	Soybean	nucleus	57.14	56.93
Solyc10g081560.1.1	Tomato	cytosol, nucleus, peroxisome	55.64	56.06
KRH31026	Soybean	cytosol, mitochondrion, peroxisome, plastid	56.77	55.51
KRH24733	Soybean	nucleus	55.26	55.47
PGSC0003DMT400053141	Potato	mitochondrion, peroxisome, plastid	54.14	54.75
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	55.26	54.65
PGSC0003DMT400072533	Potato	peroxisome	54.14	54.55
PGSC0003DMT400022974	Potato	peroxisome	55.26	54.44
KRH00032	Soybean	cytosol, peroxisome, plastid	36.84	54.44
KRG97856	Soybean	mitochondrion, plastid	55.64	54.41
KRH31025	Soybean	plastid	56.39	54.15
Solyc04g054950.2.1	Tomato	mitochondrion, peroxisome, plastid	53.38	53.99
Solyc09g011130.1.1	Tomato	plastid	53.38	53.99
Solyc09g011140.2.1	Tomato	cytosol	54.51	53.7
KRH31007	Soybean	mitochondrion	52.63	51.66
PGSC0003DMT400015320	Potato	peroxisome	49.25	50.19
Solyc04g007400.2.1	Tomato	cytosol	48.87	49.81
KRH24734	Soybean	extracellular, plasma membrane, vacuole	21.05	49.12
KRG97857	Soybean	mitochondrion	45.86	48.8
KRH29741	Soybean	plastid	55.64	48.21
KRH31021	Soybean	mitochondrion	54.89	48.18
KRG97870	Soybean	mitochondrion	45.11	48.0
KRH29740	Soybean	cytosol	16.92	45.92
PGSC0003DMT400022973	Potato	peroxisome	54.14	38.71
KRH02005	Soybean	endoplasmic reticulum, nucleus	34.59	36.51
KRH70902	Soybean	cytosol	13.53	32.73
KRH11511	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	30.83	32.16
KRH36525	Soybean	endoplasmic reticulum	30.45	31.76
KRG96884	Soybean	cytosol	27.82	25.08
KRH33956	Soybean	endoplasmic reticulum	27.44	24.91
KRG92837	Soybean	endoplasmic reticulum, nucleus	27.07	24.57
KRH68572	Soybean	cytosol	26.69	23.67
KRH68615	Soybean	cytosol, nucleus, plastid	19.55	23.53
KRH44885	Soybean	nucleus	25.56	22.82
KRH51046	Soybean	cytosol, peroxisome, plastid	26.69	22.26
KRH68573	Soybean	cytosol	22.93	22.18
KRH13054	Soybean	nucleus	24.81	22.15

Protein Annotations

EntrezGene:100306108	Gene3D:3.40.50.720	MapMan:50.1.1	EMBL:ACUP02011364	EMBL:BT090054	UniProt:C6SY07
EnsemblPlantsGene:GLYMA_18G186800	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	EnsemblPlants:KRH00030	ProteinID:KRH00030	ProteinID:KRH00030.1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF13561
PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR42898	PANTHER:PTHR42898:SF13	InterPro:SDR_fam
SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	UniParc:UPI0001B15598	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:44962854..44965482

Molecular Weight (calculated)

28498.3 Da

IEP (calculated)

6.910

GRAVY (calculated)

0.050

Length

266 amino acids

Sequence
(BLAST)

001: MAETKLSSFK DKRWSLHGMT ALVTGGTRGI GYAIAEELAE FGAAVHICAR KQQDIDKCLE EWNKKGLPIT GSACDVLSRD QRENLMKNVA SIFNGKLNIL
101: INNAGTTTPK NLIDYTAEDV TTIMETNFGS SYHLCQLAHP LLKASGYGSI VFISSIAGLK ALPYSSVYAS SKGAMNQFTK NIALEWAKDN IRANAVAPGT
201: VKTVLLDSIM KAAAEADKAV EYIVSQTPVG RLGDPEDISP LVAFLCLPAA SYITGQIITA DGGYII

Best Arabidopsis Sequence Match ( AT1G07440.1 )
(BLAST)

001: MAGAEQSQRW SLKAKTVLVT GGTKGIGHAI VEEFAGFGAV IHTCARNEYE LNECLSKWQK KGFQVTGSVC DASLRPEREK LMQTVSSMFG GKLDILINNL
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG

Arabidopsis Description

Tropinone reductase homolog At1g07440 [Source:UniProtKB/Swiss-Prot;Acc:P0DKI3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.