CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 3
mitochondrion 4
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH00029	Soybean	peroxisome	31.7	85.71
KRH00026	Soybean	cytosol, mitochondrion, peroxisome	79.25	79.55
KRH49152	Soybean	cytosol	75.47	67.8
KRH00030	Soybean	cytosol	66.79	66.54
KRH49153	Soybean	cytosol	65.28	65.04
KRH49156	Soybean	plastid	40.0	61.99
VIT_08s0007g00920.t01	Wine grape	peroxisome	60.0	59.55
VIT_08s0007g00900.t01	Wine grape	mitochondrion, plastid	56.6	57.25
KRH24731	Soybean	nucleus	56.98	56.55
PGSC0003DMT400022974	Potato	peroxisome	55.85	54.81
Solyc09g011140.2.1	Tomato	cytosol	55.47	54.44
PGSC0003DMT400053141	Potato	mitochondrion, peroxisome, plastid	53.96	54.37
Solyc04g054950.2.1	Tomato	mitochondrion, peroxisome, plastid	53.96	54.37
Solyc09g011130.1.1	Tomato	plastid	52.83	53.23
KRH24733	Soybean	nucleus	53.21	53.21
KRH31026	Soybean	cytosol, mitochondrion, peroxisome, plastid	54.34	52.94
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	53.58	52.79
Solyc10g081560.1.1	Tomato	cytosol, nucleus, peroxisome	51.7	51.89
KRG97856	Soybean	mitochondrion, plastid	53.21	51.84
KRH31025	Soybean	plastid	53.96	51.62
PGSC0003DMT400072533	Potato	peroxisome	50.94	51.14
KRH00032	Soybean	cytosol, peroxisome, plastid	34.34	50.56
KRH31007	Soybean	mitochondrion	50.94	49.82
Solyc04g007400.2.1	Tomato	cytosol	49.06	49.81
PGSC0003DMT400015320	Potato	peroxisome	49.06	49.81
KRG97870	Soybean	mitochondrion	45.66	48.4
KRH29740	Soybean	cytosol	17.74	47.96
KRH29741	Soybean	plastid	53.58	46.25
KRH31021	Soybean	mitochondrion	51.7	45.21
KRG97857	Soybean	mitochondrion	42.64	45.2
KRH24734	Soybean	extracellular, plasma membrane, vacuole	18.87	43.86
PGSC0003DMT400022973	Potato	peroxisome	53.96	38.44
KRH02005	Soybean	endoplasmic reticulum, nucleus	33.58	35.32
KRH36525	Soybean	endoplasmic reticulum	29.81	30.98
KRH11511	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	29.43	30.59
KRH70902	Soybean	cytosol	12.45	30.0
KRH33956	Soybean	endoplasmic reticulum	27.55	24.91
KRG92837	Soybean	endoplasmic reticulum, nucleus	27.17	24.57
KRG96884	Soybean	cytosol	26.42	23.73
KRH51046	Soybean	cytosol, peroxisome, plastid	27.55	22.88
KRH68572	Soybean	cytosol	25.66	22.67
KRH68573	Soybean	cytosol	23.02	22.18
KRH44885	Soybean	nucleus	24.15	21.48
KRH68615	Soybean	cytosol, nucleus, plastid	17.74	21.27
KRH13054	Soybean	nucleus	23.77	21.14

Protein Annotations

EntrezGene:100803880	Gene3D:3.40.50.720	MapMan:50.1.1	EMBL:ACUP02004334	EnsemblPlantsGene:GLYMA_07G136000	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	UniProt:I1KK25
EnsemblPlants:KRH49151	ProteinID:KRH49151	ProteinID:KRH49151.1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF13561	PRINTS:PR00080
PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR42898	PANTHER:PTHR42898:SF13	InterPro:SDR_fam	SMART:SM00822
SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	TMHMM:TMhelix	UniParc:UPI00023C776B	:	:

Description

hypothetical protein

Coordinates

chr7:+:16105192..16108551

Molecular Weight (calculated)

28375.2 Da

IEP (calculated)

6.015

GRAVY (calculated)

0.143

Length

265 amino acids

Sequence
(BLAST)

001: MAETKLSMMK DKRWSLRGMT ALVTGATRGI GHAIVEELAD FGATVHICAR NQDDIDKCLE EWKNEGLNVT GSVCDLQCSD QRIRLMEVVG SIFHGKLNIL
101: VNNAGRCIAK TILDSTAEDI STTMGTNFES AYHLCQLAHP LLRESGYGSV VFISSTAGLR GFPFFSAYAA SKGAMNQFTK NLAFEWAKDN IRGNAVASGP
201: VMTVLMEGVM NSSEVSDVVN AATSQSLVGR MGEAKQISAL VAFLCLPVAS YITGQVICVD GGLTT

Best Arabidopsis Sequence Match ( AT1G07440.1 )
(BLAST)

001: MAGAEQSQRW SLKAKTVLVT GGTKGIGHAI VEEFAGFGAV IHTCARNEYE LNECLSKWQK KGFQVTGSVC DASLRPEREK LMQTVSSMFG GKLDILINNL
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG

Arabidopsis Description

Tropinone reductase homolog At1g07440 [Source:UniProtKB/Swiss-Prot;Acc:P0DKI3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.