CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH24734	Soybean	extracellular, plasma membrane, vacuole	32.9	88.6
VIT_06s0004g05280.t01	Wine grape	cytosol, nucleus, peroxisome	65.47	79.76
Solyc06g005720.2.1	Tomato	plastid	67.75	69.1
KRH31025	Soybean	plastid	55.05	61.01
KRG97856	Soybean	mitochondrion, plastid	53.75	60.66
KRH31026	Soybean	cytosol, mitochondrion, peroxisome, plastid	52.77	59.56
KRH31007	Soybean	mitochondrion	52.44	59.41
KRH24731	Soybean	nucleus	50.49	58.05
KRH24733	Soybean	nucleus	49.84	57.74
KRH00026	Soybean	cytosol, mitochondrion, peroxisome	49.19	57.2
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	49.51	56.51
KRH00030	Soybean	cytosol	48.21	55.64
KRG97870	Soybean	mitochondrion	45.28	55.6
KRH49153	Soybean	cytosol	46.58	53.76
KRG97857	Soybean	mitochondrion	43.65	53.6
KRH49151	Soybean	mitochondrion	46.25	53.58
KRH29740	Soybean	cytosol	16.94	53.06
KRH00029	Soybean	peroxisome	16.94	53.06
KRH49156	Soybean	plastid	29.32	52.63
KRH31021	Soybean	mitochondrion	51.79	52.48
KRH49152	Soybean	cytosol	44.63	46.44
KRH00032	Soybean	cytosol, peroxisome, plastid	26.06	44.44
KRH02005	Soybean	endoplasmic reticulum, nucleus	25.73	31.35
KRH11511	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	24.76	29.8
KRH36525	Soybean	endoplasmic reticulum	24.76	29.8
KRH70902	Soybean	cytosol	10.1	28.18
KRG92837	Soybean	endoplasmic reticulum, nucleus	25.08	26.28
KRH33956	Soybean	endoplasmic reticulum	24.43	25.6
KRG96884	Soybean	cytosol	23.78	24.75
KRH68615	Soybean	cytosol, nucleus, plastid	17.26	23.98
KRH68572	Soybean	cytosol	23.13	23.67
KRH44885	Soybean	nucleus	22.8	23.49
KRH13054	Soybean	nucleus	22.48	23.15
KRH68573	Soybean	cytosol	20.52	22.91
KRH51046	Soybean	cytosol, peroxisome, plastid	23.13	22.26
AT1G36580.1	Thale cress	nucleus	13.36	21.03

Protein Annotations

EMBL:ACUP02006818	EnsemblPlants:KRH29741	EnsemblPlantsGene:GLYMA_11G135700	EntrezGene:100799534	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf
InterPro:SDR_fam	PANTHER:PTHR42898	PANTHER:PTHR42898:SF2	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081
ProteinID:KRH29741	ProteinID:KRH29741.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI00023CC62C	UniProt:I1LJY0
MapMan:50.1.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:-:10319952..10323130

Molecular Weight (calculated)

33574.2 Da

IEP (calculated)

8.746

GRAVY (calculated)

-0.032

Length

307 amino acids

Sequence
(BLAST)

001: MHLASLINPT SNFPLLSSRT TTTSFIFNHR RKKSQSNCIR SHQSTIQQRW TLQGMTALVT GGTRGIGHAI VEELTGFGAR VHTCARNEHD LTKCLKNWND
101: SGFDVTGSVC DVSVPHQREA LMESVSSLFH GKLNILINNV GTNIRKPVTD FTSAEFSTLI DTNLGSVFHL CQLAYPLLKA SGMGSVVFVS SVSGFVSLKS
201: MSVQGATKGA INQLTRNLAC EWAKDNIRSN AVAPWYIKTS LVEQVLSNKD YLEEVYSRTP LRRLGDPAEV SSLVAFLCLP ASSYITGQII CIDGGMSVNG
301: FYPTTQF

Best Arabidopsis Sequence Match ( AT2G29260.1 )
(BLAST)

001: MVLDMASHLY TNPPQNLHFI SSSSSLKPHL CLSFKRINPK HKSSSSSVFV PYASQSSIAI TSKERWSLNG MSALVTGGTR GIGRAIVEEL AGLGAEVHTC
101: ARNEYELENC LSDWNRSGFR VAGSVCDVSD RSQREALMET VSSVFEGKLH ILVNNVGTNI RKPMVEFTAG EFSTLMSTNF ESVFHLCQLA YPLLRESKAG
201: SVVFISSVSG FVSLKNMSVQ SSTKGAINQL TRSLACEWAK DNIRINAVAP WYIKTSMVEQ VLSNKEYLEE VYSVTPLGRL GEPREVSSAV AFLCLPASSY
301: ITGQILCVDG GMSINGFFPR HD

Arabidopsis Description

Tropinone reductase homolog At2g29260, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW12]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.