CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:

cytosol 3
mitochondrion 3
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49151	Soybean	mitochondrion	79.55	79.25
KRH00029	Soybean	peroxisome	28.79	77.55
KRH49152	Soybean	cytosol	84.09	75.25
KRH00030	Soybean	cytosol	72.35	71.8
KRH49153	Soybean	cytosol	70.83	70.3
KRH49156	Soybean	plastid	42.05	64.91
VIT_08s0007g00900.t01	Wine grape	mitochondrion, plastid	62.5	62.98
VIT_08s0007g00920.t01	Wine grape	peroxisome	63.64	62.92
PGSC0003DMT400022974	Potato	peroxisome	60.98	59.63
Solyc09g011140.2.1	Tomato	cytosol	60.23	58.89
KRH24731	Soybean	nucleus	58.71	58.05
Solyc10g081560.1.1	Tomato	cytosol, nucleus, peroxisome	57.95	57.95
Solyc09g011130.1.1	Tomato	plastid	57.58	57.79
PGSC0003DMT400053141	Potato	mitochondrion, peroxisome, plastid	56.06	56.27
KRH31026	Soybean	cytosol, mitochondrion, peroxisome, plastid	57.95	56.25
KRH24733	Soybean	nucleus	56.44	56.23
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	57.2	56.13
PGSC0003DMT400072533	Potato	peroxisome	56.06	56.06
Solyc04g054950.2.1	Tomato	mitochondrion, peroxisome, plastid	55.68	55.89
KRG97856	Soybean	mitochondrion, plastid	57.58	55.88
KRH00032	Soybean	cytosol, peroxisome, plastid	37.5	55.0
KRH31007	Soybean	mitochondrion	56.06	54.61
KRH31025	Soybean	plastid	57.2	54.51
PGSC0003DMT400015320	Potato	peroxisome	52.65	53.26
KRG97870	Soybean	mitochondrion	50.0	52.8
Solyc04g007400.2.1	Tomato	cytosol	51.89	52.49
KRH29741	Soybean	plastid	57.2	49.19
KRH31021	Soybean	mitochondrion	55.68	48.51
KRG97857	Soybean	mitochondrion	45.83	48.4
KRH24734	Soybean	extracellular, plasma membrane, vacuole	20.83	48.25
KRH29740	Soybean	cytosol	17.8	47.96
PGSC0003DMT400022973	Potato	peroxisome	57.95	41.13
KRH02005	Soybean	endoplasmic reticulum, nucleus	34.85	36.51
KRH36525	Soybean	endoplasmic reticulum	31.06	32.16
KRH11511	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	30.68	31.76
KRH70902	Soybean	cytosol	12.5	30.0
KRH33956	Soybean	endoplasmic reticulum	31.06	27.99
KRG92837	Soybean	endoplasmic reticulum, nucleus	30.68	27.65
KRG96884	Soybean	cytosol	30.3	27.12
KRH68573	Soybean	cytosol	26.14	25.09
KRH68572	Soybean	cytosol	28.41	25.0
KRH68615	Soybean	cytosol, nucleus, plastid	20.83	24.89
KRH51046	Soybean	cytosol, peroxisome, plastid	29.92	24.76
KRH44885	Soybean	nucleus	27.65	24.5
KRH13054	Soybean	nucleus	27.27	24.16

Protein Annotations

EntrezGene:100786456	Gene3D:3.40.50.720	MapMan:50.1.1	UniProt:A0A0R0F1L5	EMBL:ACUP02011363	EnsemblPlantsGene:GLYMA_18G186400
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
EnsemblPlants:KRH00026	ProteinID:KRH00026	ProteinID:KRH00026.1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF13561	PRINTS:PR00080
PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR42898	PANTHER:PTHR42898:SF13	InterPro:SDR_fam	SUPFAM:SSF51735
InterPro:Sc_DH/Rdtase_CS	TMHMM:TMhelix	UniParc:UPI0001AE6182	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:44829997..44833537

Molecular Weight (calculated)

28360.3 Da

IEP (calculated)

7.062

GRAVY (calculated)

0.114

Length

264 amino acids

Sequence
(BLAST)

001: MAETKWVMKD KRWSLHGMTA LVTGGTRGIG HAIVEELAEF GATVHICARN QDDIDKCLEE WKSKGLNVTG SVCDLLCSDQ RKRLMEIVGS IFHGKLNILV
101: NNAATNITKK ITDYTAEDIS AIMGTNFESV YHLCQVAHPL LKDSGNGSIV FISSVAGLKA LPVFSVYAAS KGAMNQFTKN LALEWAKDNI RANAVAPGPV
201: KTKLLECIVN SSEGNESING VVSQTFVGRM GETKEISALV AFLCLPAASY ITGQVICVDG GFTT

Best Arabidopsis Sequence Match ( AT1G07440.1 )
(BLAST)

001: MAGAEQSQRW SLKAKTVLVT GGTKGIGHAI VEEFAGFGAV IHTCARNEYE LNECLSKWQK KGFQVTGSVC DASLRPEREK LMQTVSSMFG GKLDILINNL
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG

Arabidopsis Description

Tropinone reductase homolog At1g07440 [Source:UniProtKB/Swiss-Prot;Acc:P0DKI3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.