Factsheet for Solyc10g081560.1.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

cytosol 2
plastid 1
mitochondrion 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400072533	Potato	peroxisome	95.08	95.08
Solyc04g007400.2.1	Tomato	cytosol	64.39	65.13
Solyc03g096650.1.1	Tomato	cytosol	21.21	62.92
Solyc09g011140.2.1	Tomato	cytosol	62.5	61.11
VIT_08s0007g00900.t01	Wine grape	mitochondrion, plastid	59.85	60.31
Solyc09g011130.1.1	Tomato	plastid	59.47	59.7
KRH00026	Soybean	cytosol, mitochondrion, peroxisome	57.95	57.95
VIT_08s0007g00920.t01	Wine grape	peroxisome	57.95	57.3
KRH00029	Soybean	peroxisome	21.21	57.14
KRH00030	Soybean	cytosol	56.06	55.64
Solyc03g096640.2.1	Tomato	mitochondrion, plastid	56.06	55.22
Solyc04g054950.2.1	Tomato	mitochondrion, peroxisome, plastid	54.92	55.13
Solyc06g083490.2.1	Tomato	cytosol, peroxisome, plastid	38.26	54.59
Solyc06g083480.2.1	Tomato	cytosol	26.52	54.26
KRH49153	Soybean	cytosol	54.17	53.76
KRH49156	Soybean	plastid	34.09	52.63
Solyc10g086620.1.1	Tomato	plastid	54.17	52.38
KRH49151	Soybean	mitochondrion	51.89	51.7
Solyc06g083470.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	49.24	48.33
KRH49152	Soybean	cytosol	53.79	48.14
Solyc03g096660.1.1	Tomato	extracellular	35.23	47.69
Solyc06g005720.2.1	Tomato	plastid	53.03	46.51
KRH00032	Soybean	cytosol, peroxisome, plastid	29.55	43.33
Solyc04g014670.2.1	Tomato	plastid	29.17	30.43
Solyc01g098850.2.1	Tomato	extracellular	30.3	23.53
Solyc07g066630.2.1	Tomato	plastid	24.62	21.74

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0055114	UniProt:K4D343	InterPro:NAD(P)-bd_dom_sf	PFAM:PF13561	PRINTS:PR00080
PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR42898	PANTHER:PTHR42898:SF3	InterPro:SDR_fam	SUPFAM:SSF51735
InterPro:Sc_DH/Rdtase_CS	EnsemblPlantsGene:Solyc10g081560.1	EnsemblPlants:Solyc10g081560.1.1	TMHMM:TMhelix	UniParc:UPI0002769A6C	SEG:seg

Description

No Description!

Coordinates

chr10:-:62603053..62605782

Molecular Weight (calculated)

28784.6 Da

IEP (calculated)

6.528

GRAVY (calculated)

-0.045

Length

264 amino acids

Sequence
(BLAST)

001: MAELREKWSL EGTTALVTGG SKGIGYAIVE ELANFGARVY TCSRNENELQ KCLDIWRKKG LKVEGSVCDL LSHTEREKLM KNIEDVFDGK LNILVNNAGV
101: VIYKEAKDFT KEDYNIIMGT NFEAGYHLSQ IAYPLLKSSQ NGNIIFVSSI AGFSALPSLS LYSASKGAIN QMTKNLACEW AKDNIRVNSV APAVILTPLI
201: ETAIKKNPQQ KEEIDSFVVK TPLGRAGKPE EVSAVVAFLC FPAASYITGQ IIWADGGFTA NGGF

Best Arabidopsis Sequence Match ( AT2G29260.1 )
(BLAST)

001: MVLDMASHLY TNPPQNLHFI SSSSSLKPHL CLSFKRINPK HKSSSSSVFV PYASQSSIAI TSKERWSLNG MSALVTGGTR GIGRAIVEEL AGLGAEVHTC
101: ARNEYELENC LSDWNRSGFR VAGSVCDVSD RSQREALMET VSSVFEGKLH ILVNNVGTNI RKPMVEFTAG EFSTLMSTNF ESVFHLCQLA YPLLRESKAG
201: SVVFISSVSG FVSLKNMSVQ SSTKGAINQL TRSLACEWAK DNIRINAVAP WYIKTSMVEQ VLSNKEYLEE VYSVTPLGRL GEPREVSSAV AFLCLPASSY
301: ITGQILCVDG GMSINGFFPR HD

Arabidopsis Description

Tropinone reductase homolog At2g29260, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW12]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.