Factsheet for Solyc04g007400.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400015320	Potato	peroxisome	98.08	98.08
Solyc10g081560.1.1	Tomato	cytosol, nucleus, peroxisome	65.13	64.39
Solyc09g011140.2.1	Tomato	cytosol	60.54	58.52
VIT_08s0007g00900.t01	Wine grape	mitochondrion, plastid	58.62	58.4
VIT_08s0007g00920.t01	Wine grape	peroxisome	58.62	57.3
Solyc03g096650.1.1	Tomato	cytosol	19.54	57.3
Solyc09g011130.1.1	Tomato	plastid	56.7	56.27
KRH00029	Soybean	peroxisome	20.69	55.1
Solyc03g096640.2.1	Tomato	mitochondrion, plastid	56.32	54.85
Solyc04g054950.2.1	Tomato	mitochondrion, peroxisome, plastid	54.79	54.37
Solyc06g083480.2.1	Tomato	cytosol	26.44	53.49
KRH00026	Soybean	cytosol, mitochondrion, peroxisome	52.49	51.89
Solyc06g083490.2.1	Tomato	cytosol, peroxisome, plastid	36.78	51.89
Solyc10g086620.1.1	Tomato	plastid	51.34	49.08
KRH49151	Soybean	mitochondrion	49.81	49.06
KRH00030	Soybean	cytosol	49.81	48.87
Solyc03g096660.1.1	Tomato	extracellular	36.4	48.72
KRH49153	Soybean	cytosol	49.04	48.12
KRH49156	Soybean	plastid	31.42	47.95
Solyc06g083470.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	48.28	46.84
Solyc06g005720.2.1	Tomato	plastid	50.96	44.19
KRH49152	Soybean	cytosol	49.04	43.39
KRH00032	Soybean	cytosol, peroxisome, plastid	28.74	41.67
Solyc04g014670.2.1	Tomato	plastid	32.57	33.6
Solyc07g066630.2.1	Tomato	plastid	27.59	24.08
Solyc01g098850.2.1	Tomato	extracellular	27.59	21.18

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114	UniProt:K4BNP7
InterPro:NAD(P)-bd_dom_sf	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR42898
PANTHER:PTHR42898:SF3	InterPro:SDR_fam	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	EnsemblPlantsGene:Solyc04g007400.2	EnsemblPlants:Solyc04g007400.2.1
TMHMM:TMhelix	UniParc:UPI00027669B5	:	:	:	:

Description

No Description!

Coordinates

chr4:-:1086733..1089646

Molecular Weight (calculated)

28440.1 Da

IEP (calculated)

5.955

GRAVY (calculated)

0.023

Length

261 amino acids

Sequence
(BLAST)

001: MAAGRWNLEG CTALVTGGSK GIGYGIVEEL ASHGASVYTC SRNQKELNEC LIQWRNKGFK VEASVCDLSS RSEREEFIKT VANHFDGKLN ILVNNAGIVI
101: YKEAKDYTME DYSLIMSINF EAAYHLSVLA HPFLKASHRG NVVFISSISG ASALPYEAVY GATKGAMDQL TRCLAFEWAK DNIRVNGVAP GVIASSMVEM
201: TIQDPEQKEN LDKLIDRCAL HRMGEPKELA AVVAFLCFPA ASYVTGQIIY VDGGFMANGG F

Best Arabidopsis Sequence Match ( AT1G07440.1 )
(BLAST)

001: MAGAEQSQRW SLKAKTVLVT GGTKGIGHAI VEEFAGFGAV IHTCARNEYE LNECLSKWQK KGFQVTGSVC DASLRPEREK LMQTVSSMFG GKLDILINNL
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG

Arabidopsis Description

Tropinone reductase homolog At1g07440 [Source:UniProtKB/Swiss-Prot;Acc:P0DKI3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.