Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400049413 | Potato | endoplasmic reticulum, peroxisome, plastid | 97.07 | 94.98 |
| Solyc03g096650.1.1 | Tomato | cytosol | 21.25 | 65.17 |
| VIT_08s0007g00890.t01 | Wine grape | peroxisome | 56.78 | 62.0 |
| Solyc03g096640.2.1 | Tomato | mitochondrion, plastid | 54.21 | 55.22 |
| Solyc04g054950.2.1 | Tomato | mitochondrion, peroxisome, plastid | 52.75 | 54.75 |
| Solyc10g081560.1.1 | Tomato | cytosol, nucleus, peroxisome | 52.38 | 54.17 |
| Solyc09g011130.1.1 | Tomato | plastid | 51.28 | 53.23 |
| Solyc09g011140.2.1 | Tomato | cytosol | 51.28 | 51.85 |
| Solyc04g007400.2.1 | Tomato | cytosol | 49.08 | 51.34 |
| Solyc06g083490.2.1 | Tomato | cytosol, peroxisome, plastid | 34.43 | 50.81 |
| Solyc06g083480.2.1 | Tomato | cytosol | 23.81 | 50.39 |
| Solyc06g083470.2.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 48.35 | 49.07 |
| Solyc06g005720.2.1 | Tomato | plastid | 51.65 | 46.84 |
| Solyc03g096660.1.1 | Tomato | extracellular | 32.97 | 46.15 |
| Solyc04g014670.2.1 | Tomato | plastid | 30.04 | 32.41 |
| Solyc01g098850.2.1 | Tomato | extracellular | 30.4 | 24.41 |
| Solyc07g066630.2.1 | Tomato | plastid | 26.01 | 23.75 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:50.1.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | UniProt:K4D493 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF13561 |
| PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | PANTHER:PTHR42898 | PANTHER:PTHR42898:SF13 | InterPro:SDR_fam |
| SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS | EnsemblPlantsGene:Solyc10g086620.1 | EnsemblPlants:Solyc10g086620.1.1 | UniParc:UPI0002769620 | SEG:seg |
Description
No Description!
Coordinates
chr10:+:65390019..65392505
Molecular Weight (calculated)
29233.1 Da
IEP (calculated)
7.006
GRAVY (calculated)
0.101
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEQSSSSNR VQKWSLHGKT ALVTGGTRGI GSAIVEELAG FGASVHTCSR NKKELDDKIQ EWEAKGFKVT GSVCDLFFKE QREQLIHNVS SVFEGKLNIL
101: VNNAAISMIK RTADISVEDY SKIMGTNVDS PFHITQIAYP LLKACGNTAS IVFISSLAGS LALPALSVYG ASKGAINQLT KFLACEWAND GIRVNTVSPF
201: AVKTSILKAE DIDPSLVGNY SELMCRTPLK PIAEPDEISP LVAFLCLPAA SHITGQIILV DGGFSAGSFK FQS
101: VNNAAISMIK RTADISVEDY SKIMGTNVDS PFHITQIAYP LLKACGNTAS IVFISSLAGS LALPALSVYG ASKGAINQLT KFLACEWAND GIRVNTVSPF
201: AVKTSILKAE DIDPSLVGNY SELMCRTPLK PIAEPDEISP LVAFLCLPAA SHITGQIILV DGGFSAGSFK FQS
001: MAKAGENSRD KSRWSLEGMT ALVTGGSKGL GEAVVEELAM LGARVHTCAR DETQLQERLR EWQAKGFEVT TSVCDVSSRE QREKLMETVS SVFQGKLNIL
101: VNNAGTGIIK PSTEYTAEDY SFLMATNLES AFHLSQIAHP LLKASGSGSI VFMSSVAGLV HTGASIYGAS KGAMNQLGRS LACEWASDNI RVNSVCPWVI
201: TTPLTSFIFS DEKLRKAVED KTPMGRVGEA NEVSSLVAFL CFPAASYITG QTICVDGGAS VNGFSFKP
101: VNNAGTGIIK PSTEYTAEDY SFLMATNLES AFHLSQIAHP LLKASGSGSI VFMSSVAGLV HTGASIYGAS KGAMNQLGRS LACEWASDNI RVNSVCPWVI
201: TTPLTSFIFS DEKLRKAVED KTPMGRVGEA NEVSSLVAFL CFPAASYITG QTICVDGGAS VNGFSFKP
Arabidopsis Description
Tropinone reductase homolog At2g29150 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW03]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.