Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 3
- peroxisome 1
- mitochondrion 1
- endoplasmic reticulum 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g086620.1.1 | Tomato | plastid | 94.98 | 97.07 |
| VIT_08s0007g00890.t01 | Wine grape | peroxisome | 56.63 | 63.2 |
| PGSC0003DMT400053141 | Potato | mitochondrion, peroxisome, plastid | 53.76 | 57.03 |
| PGSC0003DMT400043159 | Potato | mitochondrion | 53.41 | 55.39 |
| PGSC0003DMT400072533 | Potato | peroxisome | 51.61 | 54.55 |
| PGSC0003DMT400015320 | Potato | peroxisome | 49.82 | 53.26 |
| PGSC0003DMT400022974 | Potato | peroxisome | 50.9 | 52.59 |
| PGSC0003DMT400043152 | Potato | peroxisome | 49.82 | 50.18 |
| PGSC0003DMT400022973 | Potato | peroxisome | 50.18 | 37.63 |
| PGSC0003DMT400034518 | Potato | peroxisome | 29.75 | 32.68 |
| PGSC0003DMT400073652 | Potato | cytosol, peroxisome, plastid | 28.67 | 27.3 |
| PGSC0003DMT400056868 | Potato | cytosol, peroxisome, plastid | 11.83 | 19.3 |
Protein Annotations
| EntrezGene:102595884 | Gene3D:3.40.50.720 | MapMan:50.1.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | UniProt:M1BNP6 | InterPro:NAD(P)-bd_dom_sf |
| PFAM:PF13561 | EnsemblPlantsGene:PGSC0003DMG400019196 | PGSC:PGSC0003DMG400019196 | EnsemblPlants:PGSC0003DMT400049413 | PRINTS:PR00080 | PRINTS:PR00081 |
| ScanProsite:PS00061 | PANTHER:PTHR42898 | PANTHER:PTHR42898:SF13 | InterPro:SDR_fam | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS |
| UniParc:UPI000294AEC0 | RefSeq:XP_006349492.1 | SEG:seg | : | : | : |
Description
Tropinone reductase [Source:PGSC_GENE;Acc:PGSC0003DMG400019196]
Coordinates
chr10:-:50824924..50827881
Molecular Weight (calculated)
29793.8 Da
IEP (calculated)
6.356
GRAVY (calculated)
0.089
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MATMATGEEQ SSSSNRVQKW SLHGKTALVT GGTRGIGSAI VEELAGFGAS VHTCSRNKKE LDEKIQEWEA KGFKVTGSVC DLFSKEQREE LIHTVSSVFE
101: GKLNILVNNA AISMIKRTAD ISVEDYSKIM GTNVESPFHI TQIAYPLLKA CGNTASIVFI SSLAGSLALP ALSVYGASKG AINQLTKFLA CEWASDGIRV
201: NTVSPFAVKT NILKAEDIDP SLLGNYSELM CRTPLKPIAE PDEISPLVAF LCLPAASHIT GQIILVDGGF SAGSFKFQS
101: GKLNILVNNA AISMIKRTAD ISVEDYSKIM GTNVESPFHI TQIAYPLLKA CGNTASIVFI SSLAGSLALP ALSVYGASKG AINQLTKFLA CEWASDGIRV
201: NTVSPFAVKT NILKAEDIDP SLLGNYSELM CRTPLKPIAE PDEISPLVAF LCLPAASHIT GQIILVDGGF SAGSFKFQS
001: MDKRWSLQGM NALVTGGTKG IGEAVVEELS ILGARVHTCA RDETQLQERL REWQEKGFQV TTSICDVSLR EQREKLMETV SSLFQGKLNI LVNNVGTLML
101: KPTTEYTAEE FSFLMATNLD SAFHISQLAH PLLKASGSGS IVLMSSIAGV VHVGVGSIYG ATKGAMNQLA RNLACEWASD NIRTNAICPW LITTPLISDL
201: LSVEEMKKEA EERTPMGRVG EANEVSPLVA FLCLPAASYI TGQVICVDGG LTVNGFSYQP HA
101: KPTTEYTAEE FSFLMATNLD SAFHISQLAH PLLKASGSGS IVLMSSIAGV VHVGVGSIYG ATKGAMNQLA RNLACEWASD NIRTNAICPW LITTPLISDL
201: LSVEEMKKEA EERTPMGRVG EANEVSPLVA FLCLPAASYI TGQVICVDGG LTVNGFSYQP HA
Arabidopsis Description
Tropinone reductase homolog At2g29290 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW13]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.