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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • plastid 1
  • mitochondrion 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400022974 Potato peroxisome 92.96 92.96
Solyc09g011130.1.1 Tomato plastid 65.19 66.92
VIT_08s0007g00900.t01 Wine grape mitochondrion, plastid 63.7 65.65
Solyc03g096650.1.1 Tomato cytosol 20.74 62.92
Solyc06g083480.2.1 Tomato cytosol 30.0 62.79
Solyc10g081560.1.1 Tomato cytosol, nucleus, peroxisome 61.11 62.5
Solyc06g083490.2.1 Tomato cytosol, peroxisome, plastid 42.59 62.16
VIT_08s0007g00920.t01 Wine grape peroxisome 61.11 61.8
Solyc04g007400.2.1 Tomato cytosol 58.52 60.54
KRH00026 Soybean cytosol, mitochondrion, peroxisome 58.89 60.23
Solyc04g054950.2.1 Tomato mitochondrion, peroxisome, plastid 58.15 59.7
KRH00029 Soybean peroxisome 21.48 59.18
Solyc03g096640.2.1 Tomato mitochondrion, plastid 57.78 58.21
KRH49151 Soybean mitochondrion 54.44 55.47
KRH49153 Soybean cytosol 54.07 54.89
Solyc03g096660.1.1 Tomato extracellular 39.63 54.87
KRH00030 Soybean cytosol 53.7 54.51
KRH49156 Soybean plastid 34.07 53.8
Solyc06g083470.2.1 Tomato cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 52.96 53.16
Solyc10g086620.1.1 Tomato plastid 51.85 51.28
KRH49152 Soybean cytosol 52.96 48.47
Solyc06g005720.2.1 Tomato plastid 51.85 46.51
KRH00032 Soybean cytosol, peroxisome, plastid 29.26 43.89
Solyc04g014670.2.1 Tomato plastid 30.37 32.41
Solyc01g098850.2.1 Tomato extracellular 29.63 23.53
Solyc07g066630.2.1 Tomato plastid 25.93 23.41
Protein Annotations
EnsemblPlants:Solyc09g011140.2.1EnsemblPlantsGene:Solyc09g011140.2Gene3D:3.40.50.720GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0016491GO:GO:0055114InterPro:NAD(P)-bd_dom_sfInterPro:SDR_famInterPro:Sc_DH/Rdtase_CS
PANTHER:PTHR42898PANTHER:PTHR42898:SF15PFAM:PF13561PRINTS:PR00080PRINTS:PR00081ScanProsite:PS00061
SEG:segSUPFAM:SSF51735UniParc:UPI000276B13AUniProt:K4CRE0MapMan:50.1.1:
Description
No Description!
Coordinates
chr9:+:4499977..4502723
Molecular Weight (calculated)
29508.5 Da
IEP (calculated)
6.656
GRAVY (calculated)
-0.066
Length
270 amino acids
Sequence
(BLAST)
001: MAEKNESNNS EDGRWTLQGK TALVTGGTKG IGHAIVEELA GFGATVYTCC RNQEQLDECL EKWRGKGYKV EGCVCDLTLR SQREMLMEKV INFFQGKLNI
101: LINNAGILIV KPATEFTEDD YSILMKTNFE ASHHISQIAH PILKASESGN IVFISSIAGL VALPTNSIYA ATKGAMNQLT RSLAYEWAKD NIRVNAVAPW
201: IINTPLIEAA KKDSLTKELI ERSISRTPIC RAGEPKEVSA MVAFLCFPAA SYITGQVICV DGGHTINGSY
Best Arabidopsis Sequence Match ( AT5G06060.1 )
(BLAST)
001: METDKRWSLA GKTALVTGGT RGIGRAVVEE LAKFGAKVHT CSRNQEELNA CLNDWKANGL VVSGSVCDAS VRDQREKLIQ EASSAFSGKL NILINNVGTN
101: VRKPTVEYSS EEYAKIMSTN LESAFHLSQI AHPLLKASGV GSIVFISSVA GLVHLSSGSI YGATKGALNQ LTRNLACEWA SDNIRTNCVA PWYIKTSLVE
201: TLLEKKEFVE AVVSRTPLGR VGEPEEVSSL VAFLCLPASS YITGQVISVD GGFTVNGFSY AMKP
Arabidopsis Description
Tropinone reductase homolog At5g06060 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHT0]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.