Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
- mitochondrion 1
- peroxisome 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400022974 | Potato | peroxisome | 92.96 | 92.96 |
Solyc09g011130.1.1 | Tomato | plastid | 65.19 | 66.92 |
VIT_08s0007g00900.t01 | Wine grape | mitochondrion, plastid | 63.7 | 65.65 |
Solyc03g096650.1.1 | Tomato | cytosol | 20.74 | 62.92 |
Solyc06g083480.2.1 | Tomato | cytosol | 30.0 | 62.79 |
Solyc10g081560.1.1 | Tomato | cytosol, nucleus, peroxisome | 61.11 | 62.5 |
Solyc06g083490.2.1 | Tomato | cytosol, peroxisome, plastid | 42.59 | 62.16 |
VIT_08s0007g00920.t01 | Wine grape | peroxisome | 61.11 | 61.8 |
Solyc04g007400.2.1 | Tomato | cytosol | 58.52 | 60.54 |
KRH00026 | Soybean | cytosol, mitochondrion, peroxisome | 58.89 | 60.23 |
Solyc04g054950.2.1 | Tomato | mitochondrion, peroxisome, plastid | 58.15 | 59.7 |
KRH00029 | Soybean | peroxisome | 21.48 | 59.18 |
Solyc03g096640.2.1 | Tomato | mitochondrion, plastid | 57.78 | 58.21 |
KRH49151 | Soybean | mitochondrion | 54.44 | 55.47 |
KRH49153 | Soybean | cytosol | 54.07 | 54.89 |
Solyc03g096660.1.1 | Tomato | extracellular | 39.63 | 54.87 |
KRH00030 | Soybean | cytosol | 53.7 | 54.51 |
KRH49156 | Soybean | plastid | 34.07 | 53.8 |
Solyc06g083470.2.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 52.96 | 53.16 |
Solyc10g086620.1.1 | Tomato | plastid | 51.85 | 51.28 |
KRH49152 | Soybean | cytosol | 52.96 | 48.47 |
Solyc06g005720.2.1 | Tomato | plastid | 51.85 | 46.51 |
KRH00032 | Soybean | cytosol, peroxisome, plastid | 29.26 | 43.89 |
Solyc04g014670.2.1 | Tomato | plastid | 30.37 | 32.41 |
Solyc01g098850.2.1 | Tomato | extracellular | 29.63 | 23.53 |
Solyc07g066630.2.1 | Tomato | plastid | 25.93 | 23.41 |
Protein Annotations
EnsemblPlants:Solyc09g011140.2.1 | EnsemblPlantsGene:Solyc09g011140.2 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | InterPro:Sc_DH/Rdtase_CS |
PANTHER:PTHR42898 | PANTHER:PTHR42898:SF15 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 |
SEG:seg | SUPFAM:SSF51735 | UniParc:UPI000276B13A | UniProt:K4CRE0 | MapMan:50.1.1 | : |
Description
No Description!
Coordinates
chr9:+:4499977..4502723
Molecular Weight (calculated)
29508.5 Da
IEP (calculated)
6.656
GRAVY (calculated)
-0.066
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEKNESNNS EDGRWTLQGK TALVTGGTKG IGHAIVEELA GFGATVYTCC RNQEQLDECL EKWRGKGYKV EGCVCDLTLR SQREMLMEKV INFFQGKLNI
101: LINNAGILIV KPATEFTEDD YSILMKTNFE ASHHISQIAH PILKASESGN IVFISSIAGL VALPTNSIYA ATKGAMNQLT RSLAYEWAKD NIRVNAVAPW
201: IINTPLIEAA KKDSLTKELI ERSISRTPIC RAGEPKEVSA MVAFLCFPAA SYITGQVICV DGGHTINGSY
101: LINNAGILIV KPATEFTEDD YSILMKTNFE ASHHISQIAH PILKASESGN IVFISSIAGL VALPTNSIYA ATKGAMNQLT RSLAYEWAKD NIRVNAVAPW
201: IINTPLIEAA KKDSLTKELI ERSISRTPIC RAGEPKEVSA MVAFLCFPAA SYITGQVICV DGGHTINGSY
001: METDKRWSLA GKTALVTGGT RGIGRAVVEE LAKFGAKVHT CSRNQEELNA CLNDWKANGL VVSGSVCDAS VRDQREKLIQ EASSAFSGKL NILINNVGTN
101: VRKPTVEYSS EEYAKIMSTN LESAFHLSQI AHPLLKASGV GSIVFISSVA GLVHLSSGSI YGATKGALNQ LTRNLACEWA SDNIRTNCVA PWYIKTSLVE
201: TLLEKKEFVE AVVSRTPLGR VGEPEEVSSL VAFLCLPASS YITGQVISVD GGFTVNGFSY AMKP
101: VRKPTVEYSS EEYAKIMSTN LESAFHLSQI AHPLLKASGV GSIVFISSVA GLVHLSSGSI YGATKGALNQ LTRNLACEWA SDNIRTNCVA PWYIKTSLVE
201: TLLEKKEFVE AVVSRTPLGR VGEPEEVSSL VAFLCLPASS YITGQVISVD GGFTVNGFSY AMKP
Arabidopsis Description
Tropinone reductase homolog At5g06060 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHT0]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.