Factsheet for Solyc09g011130.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g011140.2.1	Tomato	cytosol	66.92	65.19
VIT_08s0007g00900.t01	Wine grape	mitochondrion, plastid	63.5	63.74
Solyc03g096650.1.1	Tomato	cytosol	21.29	62.92
PGSC0003DMT400022973	Potato	peroxisome	88.97	62.9
Solyc06g083480.2.1	Tomato	cytosol	29.28	59.69
Solyc10g081560.1.1	Tomato	cytosol, nucleus, peroxisome	59.7	59.47
VIT_08s0007g00920.t01	Wine grape	peroxisome	59.7	58.8
Solyc03g096640.2.1	Tomato	mitochondrion, plastid	59.7	58.58
Solyc06g083490.2.1	Tomato	cytosol, peroxisome, plastid	41.06	58.38
Solyc04g054950.2.1	Tomato	mitochondrion, peroxisome, plastid	57.79	57.79
KRH00026	Soybean	cytosol, mitochondrion, peroxisome	57.79	57.58
KRH00029	Soybean	peroxisome	21.29	57.14
Solyc04g007400.2.1	Tomato	cytosol	56.27	56.7
KRH49153	Soybean	cytosol	55.51	54.89
KRH49156	Soybean	plastid	34.98	53.8
KRH00030	Soybean	cytosol	53.99	53.38
KRH49151	Soybean	mitochondrion	53.23	52.83
Solyc03g096660.1.1	Tomato	extracellular	38.78	52.31
Solyc06g083470.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	52.47	51.3
Solyc10g086620.1.1	Tomato	plastid	53.23	51.28
Solyc06g005720.2.1	Tomato	plastid	55.89	48.84
KRH49152	Soybean	cytosol	53.61	47.8
KRH00032	Soybean	cytosol, peroxisome, plastid	31.56	46.11
Solyc04g014670.2.1	Tomato	plastid	29.28	30.43
Solyc01g098850.2.1	Tomato	extracellular	29.66	22.94
Solyc07g066630.2.1	Tomato	plastid	25.1	22.07

Protein Annotations

EnsemblPlants:Solyc09g011130.1.1	EnsemblPlantsGene:Solyc09g011130.1	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	InterPro:Sc_DH/Rdtase_CS
PANTHER:PTHR42898	PANTHER:PTHR42898:SF15	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061
SUPFAM:SSF51735	UniParc:UPI000276B139	UniProt:K4CRD9	MapMan:50.1.1	:	:

Description

No Description!

Coordinates

chr9:+:4495020..4498534

Molecular Weight (calculated)

28560.4 Da

IEP (calculated)

7.928

GRAVY (calculated)

0.025

Length

263 amino acids

Sequence
(BLAST)

001: MDTDGRWTLQ GNTAIVTGGT RGIGHAIVEE LASFGANVYT CSRNQMELDE CLRQWKAKGY TVGGSMCDLQ SRSQRLKFMD NVSSYFEGKI NILINNAAVV
101: VSNIATEYTH EDYNTMMGTN FEASYHLSQL AHPFLKASKN GRIVFISSVA GFVSLPLCSI YSAAKGAINQ LTRSLACEWA MDNIRVNAVA PWVIKTSLIE
201: AASKDLEMNK RINKLVSRTP IGGRAGEPKE VSAMVAFLCL PCASYITGQI MCVDGGITIN GSC

Best Arabidopsis Sequence Match ( AT5G06060.1 )
(BLAST)

001: METDKRWSLA GKTALVTGGT RGIGRAVVEE LAKFGAKVHT CSRNQEELNA CLNDWKANGL VVSGSVCDAS VRDQREKLIQ EASSAFSGKL NILINNVGTN
101: VRKPTVEYSS EEYAKIMSTN LESAFHLSQI AHPLLKASGV GSIVFISSVA GLVHLSSGSI YGATKGALNQ LTRNLACEWA SDNIRTNCVA PWYIKTSLVE
201: TLLEKKEFVE AVVSRTPLGR VGEPEEVSSL VAFLCLPASS YITGQVISVD GGFTVNGFSY AMKP

Arabidopsis Description

Tropinone reductase homolog At5g06060 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHT0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.