CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH00029	Soybean	peroxisome	31.67	58.16
KRH49156	Soybean	plastid	55.0	57.89
KRH00026	Soybean	cytosol, mitochondrion, peroxisome	55.0	37.5
KRH49153	Soybean	cytosol	55.0	37.22
KRH00030	Soybean	cytosol	54.44	36.84
KRH24734	Soybean	extracellular, plasma membrane, vacuole	22.22	35.09
KRH49151	Soybean	mitochondrion	50.56	34.34
VIT_08s0007g00920.t01	Wine grape	peroxisome	49.44	33.33
KRH49152	Soybean	cytosol	52.78	32.2
VIT_08s0007g00900.t01	Wine grape	mitochondrion, plastid	46.67	32.06
Solyc09g011130.1.1	Tomato	plastid	46.11	31.56
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	46.11	30.86
KRH24733	Soybean	nucleus	45.0	30.57
KRH24731	Soybean	nucleus	43.89	29.59
Solyc10g081560.1.1	Tomato	cytosol, nucleus, peroxisome	43.33	29.55
Solyc09g011140.2.1	Tomato	cytosol	43.89	29.26
PGSC0003DMT400022974	Potato	peroxisome	43.89	29.26
PGSC0003DMT400072533	Potato	peroxisome	42.78	29.17
Solyc04g007400.2.1	Tomato	cytosol	41.67	28.74
PGSC0003DMT400015320	Potato	peroxisome	41.67	28.74
KRH31007	Soybean	mitochondrion	42.78	28.41
KRG97870	Soybean	mitochondrion	38.89	28.0
PGSC0003DMT400053141	Potato	mitochondrion, peroxisome, plastid	40.56	27.76
KRH31026	Soybean	cytosol, mitochondrion, peroxisome, plastid	41.67	27.57
Solyc04g054950.2.1	Tomato	mitochondrion, peroxisome, plastid	40.0	27.38
KRH31025	Soybean	plastid	41.67	27.08
KRG97856	Soybean	mitochondrion, plastid	40.56	26.84
KRH29741	Soybean	plastid	44.44	26.06
KRG97857	Soybean	mitochondrion	31.67	22.8
KRH31021	Soybean	mitochondrion	38.33	22.77
PGSC0003DMT400022973	Potato	peroxisome	45.0	21.77
KRH02005	Soybean	endoplasmic reticulum, nucleus	27.22	19.44
KRH68615	Soybean	cytosol, nucleus, plastid	23.33	19.0
KRH36525	Soybean	endoplasmic reticulum	26.67	18.82
KRH11511	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	26.67	18.82
KRG96884	Soybean	cytosol	27.78	16.95
KRH29740	Soybean	cytosol	8.89	16.33
KRG92837	Soybean	endoplasmic reticulum, nucleus	26.11	16.04
KRH33956	Soybean	endoplasmic reticulum	26.11	16.04
KRH68572	Soybean	cytosol	26.67	16.0
KRH68573	Soybean	cytosol	23.89	15.64
KRH51046	Soybean	cytosol, peroxisome, plastid	26.67	15.05
KRH44885	Soybean	nucleus	23.89	14.43
KRH13054	Soybean	nucleus	23.33	14.09
KRH70902	Soybean	cytosol	3.33	5.45

Protein Annotations

EMBL:ACUP02011364	EnsemblPlants:KRH00032	EnsemblPlantsGene:GLYMA_18G187000	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR42898	PANTHER:PTHR42898:SF13	PFAM:PF13561	PRINTS:PR00081	ProteinID:KRH00032	ProteinID:KRH00032.1
SUPFAM:SSF51735	UniParc:UPI0002968AAF	UniProt:K7MT82	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr18:+:44979631..44980959

Molecular Weight (calculated)

19375.5 Da

IEP (calculated)

7.206

GRAVY (calculated)

0.076

Length

180 amino acids

Sequence
(BLAST)

001: MRGCNAGGDR VSMPREVSNE SVKPFDSEIN NAGTTSTKSI VDYTAEYVAT LMGTNFESCF HLCQLTQPLL KAFGYGSIVL ISGLKAFPLC STYATTKGAL
101: NQFTKMELAK DNIRANTVAP GPIKTLLLEY LIKSTAEVHK MVVAMESQMT VGRLGEPKDI STPIAFLCLP AACDASYITS

Best Arabidopsis Sequence Match ( AT5G06060.1 )
(BLAST)

001: METDKRWSLA GKTALVTGGT RGIGRAVVEE LAKFGAKVHT CSRNQEELNA CLNDWKANGL VVSGSVCDAS VRDQREKLIQ EASSAFSGKL NILINNVGTN
101: VRKPTVEYSS EEYAKIMSTN LESAFHLSQI AHPLLKASGV GSIVFISSVA GLVHLSSGSI YGATKGALNQ LTRNLACEWA SDNIRTNCVA PWYIKTSLVE
201: TLLEKKEFVE AVVSRTPLGR VGEPEEVSSL VAFLCLPASS YITGQVISVD GGFTVNGFSY AMKP

Arabidopsis Description

Tropinone reductase homolog At5g06060 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHT0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.