Skip to main content
crop-pal logo
Tomato
Search for another protein from :
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 3
  • plastid 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:secretory
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc03g096640.2.1
Solyc03g096650.1.1
Solyc03g096660.1.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G07440.1 Solyc03g096650.1.1 AT2G29310.1 21798944
AT1G07450.1 Solyc03g096650.1.1 AT2G29320.1 21798944
AT1G07450.1 Solyc03g096650.1.1 AT2G29350.1 21798944
AT2G29310.1 Solyc03g096650.1.1 AT1G07450.1 21798944
AT2G29310.1 Solyc03g096650.1.1 AT2G29310.1 21798944
AT2G29320.1 Solyc03g096650.1.1 AT2G29310.1 21798944
AT2G29330.1 Solyc03g096650.1.1 AT2G29320.1 21798944
AT2G29350.1 Solyc03g096650.1.1 AT2G29310.1 21798944
AT2G29350.1 Solyc03g096650.1.1 AT2G29320.1 21798944
AT2G29350.1 Solyc03g096650.1.1 AT2G29350.1 21798944
AT2G29350.1 Solyc03g096650.1.1 AT2G29360.1 21798944
AT2G29350.1 Solyc03g096640.2.1 AT5G06060.1 21798944
AT2G29350.1 Solyc03g096660.1.1 AT5G06060.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_06s0004g05440.t01 Wine grape cytosol 59.55 64.63
VIT_06s0004g05400.t01 Wine grape cytosol 67.42 54.05
AT2G29170.1 Thale cress cytosol 62.92 52.34
VIT_06s0004g05310.t01 Wine grape cytosol 66.29 52.21
CDY72061 Canola cytosol 61.8 50.46
GSMUA_Achr5P04570_001 Banana cytosol 55.06 38.58
KRH29740 Soybean cytosol 39.33 35.71
CDY64214 Canola mitochondrion 58.43 30.41
Bra027962.1-P Field mustard cytosol 58.43 30.06
CDY40186 Canola cytosol 61.8 26.57
Solyc03g096640.2.1 Tomato mitochondrion, plastid 76.4 25.37
CDY40171 Canola cytosol 60.67 24.43
VIT_06s0004g05370.t01 Wine grape peroxisome 68.54 24.21
VIT_06s0004g05320.t01 Wine grape endoplasmic reticulum, peroxisome, plastid 67.42 23.81
VIT_06s0004g05360.t01 Wine grape cytosol, mitochondrion, plastid 62.92 23.33
VIT_06s0004g05380.t01 Wine grape plastid 69.66 22.96
VIT_06s0004g05430.t01 Wine grape mitochondrion, nucleus, peroxisome 69.66 22.96
CDY45433 Canola cytosol 62.92 22.86
AT2G29350.1 Thale cress plastid 68.54 22.68
CDX97895 Canola cytosol 59.55 22.55
CDY31774 Canola cytosol 59.55 22.55
Bra039973.1-P Field mustard plastid 66.29 22.52
CDY68057 Canola cytosol 66.29 22.52
CDY31770 Canola plastid 58.43 22.41
AT2G29150.1 Thale cress peroxisome 67.42 22.39
CDX95752 Canola cytosol 59.55 22.27
CDX97893 Canola mitochondrion 67.42 22.14
CDY09823 Canola peroxisome 67.42 22.14
CDY09824 Canola mitochondrion 67.42 22.14
AT2G29290.2 Thale cress plastid 65.17 22.14
Bra030683.1-P Field mustard cytosol, mitochondrion, plastid 65.17 22.14
CDX86486 Canola cytosol, peroxisome, plastid 65.17 22.14
CDY31773 Canola plastid 65.17 22.14
Bra018401.1-P Field mustard cytosol 62.92 22.13
KRH24733 Soybean nucleus 65.17 21.89
Bra039513.1-P Field mustard peroxisome 64.04 21.76
CDX83307 Canola peroxisome 64.04 21.76
CDX86485 Canola cytosol, peroxisome, plastid 64.04 21.76
CDY09917 Canola cytosol 64.04 21.76
KRH24731 Soybean nucleus 65.17 21.72
KRH24732 Soybean cytosol, endoplasmic reticulum, plastid 65.17 21.56
AT1G07450.1 Thale cress cytosol, nucleus, peroxisome 62.92 21.54
CDY40179 Canola cytosol, peroxisome, plastid 62.92 21.46
CDY10276 Canola mitochondrion 64.04 21.43
CDY14610 Canola mitochondrion 64.04 21.43
Bra039976.1-P Field mustard cytosol 65.17 21.4
CDY31776 Canola cytosol, peroxisome, plastid 65.17 21.4
AT2G30670.1 Thale cress cytosol, nucleus, peroxisome 62.92 21.37
Bra018400.1-P Field mustard cytosol, nucleus, plastid 62.92 21.37
Bra031575.1-P Field mustard plastid 62.92 21.37
CDY06260 Canola plastid 62.92 21.37
CDY31772 Canola cytosol, peroxisome, plastid 62.92 21.37
CDY40175 Canola plasma membrane 62.92 21.37
Solyc09g011130.1.1 Tomato plastid 62.92 21.29
AT2G29370.1 Thale cress peroxisome 64.04 21.27
Solyc10g086620.1.1 Tomato plastid 65.17 21.25
Solyc10g081560.1.1 Tomato cytosol, nucleus, peroxisome 62.92 21.21
CDY51372 Canola plastid 66.29 21.15
VIT_06s0004g05390.t01 Wine grape cytosol, plasma membrane, plastid 58.43 21.14
Bra015580.1-P Field mustard mitochondrion 62.92 21.05
CDY06706 Canola mitochondrion 62.92 21.05
Bra000477.1-P Field mustard plastid 61.8 20.99
Bra018393.1-P Field mustard cytosol 61.8 20.99
Bra039967.1-P Field mustard plastid 61.8 20.99
Bra039971.1-P Field mustard endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 61.8 20.99
CDX83306 Canola plastid 61.8 20.99
CDX95751 Canola peroxisome 61.8 20.99
CDX95753 Canola cytosol, peroxisome, plastid 61.8 20.99
CDY31768 Canola cytosol, peroxisome, plastid 61.8 20.99
CDY40182 Canola cytosol, peroxisome, plastid 61.8 20.99
CDY40188 Canola cytosol, peroxisome, plasma membrane 61.8 20.99
CDY45432 Canola cytosol 61.8 20.99
CDY45434 Canola cytosol, nucleus, plastid 61.8 20.99
CDY62820 Canola cytosol, endoplasmic reticulum, peroxisome 61.8 20.91
Solyc09g011140.2.1 Tomato cytosol 62.92 20.74
AT1G07440.1 Thale cress mitochondrion 61.8 20.68
AT2G29360.1 Thale cress cytosol 62.92 20.66
AT2G29310.1 Thale cress cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 60.67 20.61
Bra000476.1-P Field mustard cytosol, peroxisome, plastid 60.67 20.61
Bra018391.1-P Field mustard cytosol 60.67 20.61
Bra018396.1-P Field mustard cytosol 60.67 20.61
Bra018399.1-P Field mustard cytosol, peroxisome, plastid 60.67 20.61
Bra039514.1-P Field mustard cytosol, peroxisome, plastid 60.67 20.61
CDX97899 Canola peroxisome 60.67 20.61
CDY40165 Canola plastid 60.67 20.61
CDY40185 Canola plastid 60.67 20.61
CDY45435 Canola cytosol, peroxisome, plastid 60.67 20.61
CDY45438 Canola cytosol 60.67 20.61
Bra039969.1-P Field mustard cytosol 60.67 20.53
VIT_06s0004g05330.t01 Wine grape peroxisome 58.43 20.47
CDX95750 Canola cytosol 62.92 20.44
Bra039755.1-P Field mustard mitochondrion 60.67 20.3
CDY16437 Canola mitochondrion 60.67 20.3
CDY52942 Canola mitochondrion 60.67 20.3
CDY40183 Canola plastid 59.55 20.23
Bra039974.1-P Field mustard cytosol, plasma membrane, plastid 59.55 20.15
AT2G29320.1 Thale cress mitochondrion 60.67 20.07
Bra018405.1-P Field mustard cytosol 58.43 19.85
Solyc04g054950.2.1 Tomato mitochondrion, peroxisome, plastid 58.43 19.77
Solyc06g083470.2.1 Tomato cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 59.55 19.7
AT2G29330.1 Thale cress cytosol, peroxisome, plastid 57.3 19.62
Solyc04g007400.2.1 Tomato cytosol 57.3 19.54
CDY40177 Canola cytosol 60.67 19.49
AT2G29300.2 Thale cress extracellular 61.8 19.23
Solyc06g005720.2.1 Tomato plastid 62.92 18.6
AT2G29340.1 Thale cress cytosol, endoplasmic reticulum, peroxisome 62.92 18.24
CDX97890 Canola cytosol 64.04 16.81
Bra039966.1-P Field mustard cytosol 52.81 16.32
CDX97897 Canola cytosol, extracellular 40.45 15.58
Bra018402.1-P Field mustard cytosol 38.2 15.53
CDY45441 Canola cytosol 37.08 14.73
CDY65683 Canola cytosol, mitochondrion 60.67 13.53
Bra027961.1-P Field mustard cytosol 43.82 12.87
Solyc04g014670.2.1 Tomato plastid 31.46 11.07
CDY31767 Canola plastid 65.17 10.3
Solyc07g066630.2.1 Tomato plastid 30.34 9.03
Solyc01g098850.2.1 Tomato extracellular 32.58 8.53
Solyc06g083480.2.1 Tomato cytosol 12.36 8.53
Bra039977.1-P Field mustard plastid 17.98 8.29
Bra018404.1-P Field mustard cytosol 15.73 7.53
CDY50145 Canola plastid 60.67 7.46
Solyc06g083490.2.1 Tomato cytosol, peroxisome, plastid 14.61 7.03
Solyc03g096660.1.1 Tomato extracellular 11.24 5.13
VIT_06s0004g05450.t01 Wine grape plasma membrane 7.87 3.89
CDY16436 Canola endoplasmic reticulum, vacuole 1.12 0.95
Protein Annotations
EnsemblPlants:Solyc03g096650.1.1EnsemblPlantsGene:Solyc03g096650.1Gene3D:3.40.50.720InterPro:NAD(P)-bd_dom_sfInterPro:SDR_famPANTHER:PTHR42898
PANTHER:PTHR42898:SF13PFAM:PF00106PRINTS:PR00081SUPFAM:SSF51735UniParc:UPI0002767DE1UniProt:K4BJ83
MapMan:35.1:::::
Description
No Description!
Coordinates
chr3:+:58951722..58952113
Molecular Weight (calculated)
9535.6 Da
IEP (calculated)
8.675
GRAVY (calculated)
0.103
Length
89 amino acids
Sequence
(BLAST)
1: MTALVTGGTR GIGHAVVEEL AELGATVYTC SRNENALNKC LQEWSVKGFK VNGCVCDVSS RPQRVKLIQN VSSAFHGKLN ILVSSITPM
Best Arabidopsis Sequence Match ( AT2G29170.1 )
(BLAST)
001: MAKAEENLRD KCRWSLGGMT ALVTGGSKGL GEAVVEELAM LGARVHTCAR NETQLQECVR EWQAKGFEVT TSVCDVSSRD QREKLMENVA SIFQGKLNIL
101: VSLCIRA
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:TAIR;Acc:AT2G29170]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.