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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:
  • cytosol 2
  • peroxisome 1
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plastid
Any Predictor:cytosol, peroxisome, plastid
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra039976.1-P Field mustard cytosol 98.52 98.52
CDY09823 Canola peroxisome 96.68 96.68
CDY09824 Canola mitochondrion 94.46 94.46
CDX97893 Canola mitochondrion 94.46 94.46
CDY72061 Canola cytosol 37.64 93.58
AT2G29150.1 Thale cress peroxisome 80.44 81.34
CDY51372 Canola plastid 79.34 77.06
CDX95750 Canola cytosol 73.8 72.99
VIT_06s0004g05400.t01 Wine grape cytosol 28.04 68.47
CDX86485 Canola cytosol, peroxisome, plastid 65.31 67.56
CDY68057 Canola cytosol 64.94 67.18
VIT_06s0004g05310.t01 Wine grape cytosol 27.68 66.37
CDX86486 Canola cytosol, peroxisome, plastid 63.84 66.03
CDY45434 Canola cytosol, nucleus, plastid 63.84 66.03
VIT_06s0004g05440.t01 Wine grape cytosol 19.93 65.85
CDY09917 Canola cytosol 63.47 65.65
CDY06706 Canola mitochondrion 64.21 65.41
Solyc03g096650.1.1 Tomato cytosol 21.4 65.17
CDY10276 Canola mitochondrion 63.84 65.04
CDY14610 Canola mitochondrion 63.84 65.04
CDY40183 Canola plastid 62.73 64.89
CDY06260 Canola plastid 62.73 64.89
VIT_06s0004g05370.t01 Wine grape peroxisome 59.78 64.29
CDY16437 Canola mitochondrion 63.1 64.29
CDY52942 Canola mitochondrion 62.36 63.53
VIT_06s0004g05320.t01 Wine grape endoplasmic reticulum, peroxisome, plastid 59.04 63.49
CDY45441 Canola cytosol 52.4 63.39
CDY40175 Canola plasma membrane 61.25 63.36
KRH24731 Soybean nucleus 62.36 63.3
CDY40179 Canola cytosol, peroxisome, plastid 60.89 63.22
CDY45438 Canola cytosol 60.89 62.98
CDY62820 Canola cytosol, endoplasmic reticulum, peroxisome 60.89 62.74
CDY40188 Canola cytosol, peroxisome, plasma membrane 60.52 62.6
CDY64214 Canola mitochondrion 39.48 62.57
CDY31774 Canola cytosol 54.24 62.55
CDY40171 Canola cytosol 50.92 62.44
KRH24733 Soybean nucleus 60.89 62.26
CDX97890 Canola cytosol 77.86 62.24
CDX97895 Canola cytosol 53.87 62.13
VIT_06s0004g05380.t01 Wine grape plastid 61.62 61.85
CDX83306 Canola plastid 59.78 61.83
CDY31768 Canola cytosol, peroxisome, plastid 59.78 61.83
CDY31772 Canola cytosol, peroxisome, plastid 59.78 61.83
KRH24732 Soybean cytosol, endoplasmic reticulum, plastid 61.25 61.71
CDY04977 Canola peroxisome 59.78 61.6
CDY45432 Canola cytosol 59.41 61.45
CDY40165 Canola plastid 59.41 61.45
CDY14094 Canola peroxisome 59.41 61.22
CDY31773 Canola plastid 59.04 61.07
CDX97899 Canola peroxisome 59.04 61.07
CDX95753 Canola cytosol, peroxisome, plastid 59.04 61.07
CDX98899 Canola peroxisome 58.67 60.69
CDX95751 Canola peroxisome 58.67 60.69
CDX83307 Canola peroxisome 58.67 60.69
CDY40185 Canola plastid 58.3 60.31
CDY40186 Canola cytosol 45.76 59.9
VIT_06s0004g05330.t01 Wine grape peroxisome 56.09 59.84
VIT_06s0004g05430.t01 Wine grape mitochondrion, nucleus, peroxisome 59.41 59.63
VIT_06s0004g05360.t01 Wine grape cytosol, mitochondrion, plastid 52.77 59.58
CDY40182 Canola cytosol, peroxisome, plastid 57.56 59.54
CDY45435 Canola cytosol, peroxisome, plastid 57.56 59.54
CDX70101 Canola peroxisome 57.2 59.16
CDX97897 Canola cytosol, extracellular 50.18 58.87
CDY45433 Canola cytosol 52.4 57.96
CDY31770 Canola plastid 49.08 57.33
CDY16436 Canola endoplasmic reticulum, vacuole 22.14 57.14
KRH29740 Soybean cytosol 20.3 56.12
CDY04975 Canola mitochondrion 22.88 55.36
CDX95752 Canola cytosol 47.23 53.78
CDY35991 Canola plastid 24.35 53.23
CDY40177 Canola cytosol 53.51 52.35
VIT_06s0004g05390.t01 Wine grape cytosol, plasma membrane, plastid 47.23 52.03
VIT_06s0004g05450.t01 Wine grape plasma membrane 33.95 51.11
GSMUA_Achr5P04570_001 Banana cytosol 22.51 48.03
CDX98898 Canola cytosol, peroxisome, plasma membrane 54.24 47.42
CDY65683 Canola cytosol, mitochondrion 61.99 42.11
CDY35231 Canola peroxisome 15.87 34.68
CDX94534 Canola peroxisome 31.0 32.94
CDY16690 Canola peroxisome 30.63 32.55
CDX76382 Canola cytosol, mitochondrion, peroxisome 28.78 30.35
CDY27447 Canola cytosol, mitochondrion, peroxisome 28.78 30.23
CDY31767 Canola plastid 62.36 30.02
CDY43488 Canola cytosol 29.52 27.68
CDY17559 Canola cytoskeleton, nucleus, peroxisome 28.78 27.18
CDY27781 Canola cytosol, peroxisome, plastid 28.41 26.64
CDY05152 Canola cytosol 21.4 24.27
CDY50145 Canola plastid 60.52 22.65
CDY08402 Canola cytosol 23.62 21.77
CDY00799 Canola peroxisome 23.62 21.48
CDX73802 Canola peroxisome 23.62 21.48
CDY05153 Canola cytosol, nucleus, plastid 4.43 17.14
Protein Annotations
Gene3D:3.40.50.720MapMan:50.1.1GO:A0A078H1X0UniProt:A0A078H1X0EnsemblPlants:CDY31776ProteinID:CDY31776
ProteinID:CDY31776.1GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0016491
GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00050433001InterPro:NAD(P)-bd_dom_sfPFAM:PF13561PRINTS:PR00080PRINTS:PR00081
ScanProsite:PS00061PANTHER:PTHR42898PANTHER:PTHR42898:SF7InterPro:SDR_famSUPFAM:SSF51735InterPro:Sc_DH/Rdtase_CS
UniParc:UPI0004EF14B7:::::
Description
BnaA04g17120DBnaA04g17120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1X0]
Coordinates
chrLK032278:+:468826..470296
Molecular Weight (calculated)
29163.9 Da
IEP (calculated)
6.351
GRAVY (calculated)
0.025
Length
271 amino acids
Sequence
(BLAST)
001: MTETGEKSRD ISRWSLRGMT ALVTGGSKGL GSAVVEELSM LGARVHTCAR DETQLQESLL EWQAKGFQVT TSVCDVSSRV QREKLMETVS TLFQGKLNIL
101: VNNAGTCITK PTTEFSAEDF SFLMATNLES AFHLSQLAHP FLKASGSGSI VFMSSAAGVV HINVGSIYGA TKGAMNQLAR NLACEWASDS IRVNSVCPWF
201: IATPLANKYI DHEEYNKEVE KKTPMGRVGE ANEVSSLVAF LCFPAASYIT GQVICVDGGA TINGLSFKSL P
Best Arabidopsis Sequence Match ( AT2G29350.1 )
(BLAST)
001: MAKEGGLGEN SRWSLGGMTA LVTGGSKGIG EAVVEELAML GAKVHTCARD ETQLQERLRE WQAKGFQVTT SVCDVSSRDQ RVKLMETVSS LYQGKLNILV
101: NNVGTSIFKP TTEYTAEDFS FVMATNLESA FHLSQLAHPL LKASGSGSIV LISSAAGVVH VNVGSIYGAT KGAMNQLARN LACEWASDNI RTNSVCPWYI
201: TTPLSNDFFD EEFKKEAVRT TPMGRVGEAN EVSPLVAFLC LPSASYITGQ TICVDGGATV NGFSFKTMP
Arabidopsis Description
SAG13SAG13 [Source:UniProtKB/TrEMBL;Acc:A0A178VTS8]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.