Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45441 | Canola | cytosol | 77.48 | 90.62 |
| CDY45438 | Canola | cytosol | 90.08 | 90.08 |
| CDY40179 | Canola | cytosol, peroxisome, plastid | 88.55 | 88.89 |
| AT2G30670.1 | Thale cress | cytosol, nucleus, peroxisome | 83.59 | 83.59 |
| CDY31774 | Canola | cytosol | 74.43 | 82.98 |
| CDY62820 | Canola | cytosol, endoplasmic reticulum, peroxisome | 83.21 | 82.89 |
| CDX97895 | Canola | cytosol | 74.05 | 82.55 |
| CDY40175 | Canola | plasma membrane | 82.06 | 82.06 |
| CDY45434 | Canola | cytosol, nucleus, plastid | 77.86 | 77.86 |
| CDY31772 | Canola | cytosol, peroxisome, plastid | 77.86 | 77.86 |
| CDY40171 | Canola | cytosol | 65.65 | 77.83 |
| CDY40183 | Canola | plastid | 77.48 | 77.48 |
| CDY31770 | Canola | plastid | 68.32 | 77.16 |
| CDY40177 | Canola | cytosol | 81.3 | 76.9 |
| CDY31773 | Canola | plastid | 76.34 | 76.34 |
| CDY31768 | Canola | cytosol, peroxisome, plastid | 76.34 | 76.34 |
| CDX97897 | Canola | cytosol, extracellular | 67.18 | 76.19 |
| CDY40188 | Canola | cytosol, peroxisome, plasma membrane | 75.95 | 75.95 |
| CDX83306 | Canola | plastid | 75.95 | 75.95 |
| CDX83307 | Canola | peroxisome | 75.57 | 75.57 |
| CDY45432 | Canola | cytosol | 75.57 | 75.57 |
| CDX95753 | Canola | cytosol, peroxisome, plastid | 75.19 | 75.19 |
| CDX97899 | Canola | peroxisome | 74.81 | 74.81 |
| CDX95751 | Canola | peroxisome | 74.81 | 74.81 |
| CDY40186 | Canola | cytosol | 58.4 | 73.91 |
| CDY40185 | Canola | plastid | 73.28 | 73.28 |
| CDY40182 | Canola | cytosol, peroxisome, plastid | 72.14 | 72.14 |
| CDY45435 | Canola | cytosol, peroxisome, plastid | 72.14 | 72.14 |
| CDY45433 | Canola | cytosol | 66.41 | 71.02 |
| CDX86486 | Canola | cytosol, peroxisome, plastid | 69.47 | 69.47 |
| CDY09917 | Canola | cytosol | 68.32 | 68.32 |
| CDY68057 | Canola | cytosol | 67.94 | 67.94 |
| CDY06260 | Canola | plastid | 67.56 | 67.56 |
| CDX86485 | Canola | cytosol, peroxisome, plastid | 66.79 | 66.79 |
| CDY52942 | Canola | mitochondrion | 67.18 | 66.17 |
| CDY16437 | Canola | mitochondrion | 66.79 | 65.79 |
| CDY06706 | Canola | mitochondrion | 66.41 | 65.41 |
| CDY14610 | Canola | mitochondrion | 66.03 | 65.04 |
| CDY10276 | Canola | mitochondrion | 66.03 | 65.04 |
| CDX95752 | Canola | cytosol | 58.78 | 64.71 |
| CDY64214 | Canola | mitochondrion | 41.22 | 63.16 |
| CDY16436 | Canola | endoplasmic reticulum, vacuole | 25.19 | 62.86 |
| VIT_06s0004g05320.t01 | Wine grape | endoplasmic reticulum, peroxisome, plastid | 59.54 | 61.9 |
| VIT_06s0004g05400.t01 | Wine grape | cytosol | 25.95 | 61.26 |
| Solyc03g096650.1.1 | Tomato | cytosol | 20.61 | 60.67 |
| VIT_06s0004g05370.t01 | Wine grape | peroxisome | 58.02 | 60.32 |
| CDX70101 | Canola | peroxisome | 60.31 | 60.31 |
| VIT_06s0004g05380.t01 | Wine grape | plastid | 61.83 | 60.0 |
| CDX98899 | Canola | peroxisome | 59.92 | 59.92 |
| CDY04977 | Canola | peroxisome | 59.92 | 59.7 |
| CDX97893 | Canola | mitochondrion | 61.45 | 59.41 |
| CDY09823 | Canola | peroxisome | 61.45 | 59.41 |
| CDY09824 | Canola | mitochondrion | 61.45 | 59.41 |
| CDY31776 | Canola | cytosol, peroxisome, plastid | 61.45 | 59.41 |
| VIT_06s0004g05310.t01 | Wine grape | cytosol | 25.57 | 59.29 |
| VIT_06s0004g05430.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 61.07 | 59.26 |
| KRH24731 | Soybean | nucleus | 60.31 | 59.18 |
| CDY14094 | Canola | peroxisome | 59.16 | 58.94 |
| CDY04975 | Canola | mitochondrion | 25.19 | 58.93 |
| KRH24733 | Soybean | nucleus | 59.54 | 58.87 |
| VIT_06s0004g05330.t01 | Wine grape | peroxisome | 56.11 | 57.87 |
| VIT_06s0004g05440.t01 | Wine grape | cytosol | 17.94 | 57.32 |
| KRH24732 | Soybean | cytosol, endoplasmic reticulum, plastid | 58.4 | 56.88 |
| CDX95750 | Canola | cytosol | 59.16 | 56.57 |
| CDY51372 | Canola | plastid | 59.16 | 55.56 |
| VIT_06s0004g05360.t01 | Wine grape | cytosol, mitochondrion, plastid | 50.0 | 54.58 |
| CDY72061 | Canola | cytosol | 22.14 | 53.21 |
| VIT_06s0004g05390.t01 | Wine grape | cytosol, plasma membrane, plastid | 49.62 | 52.85 |
| CDY35991 | Canola | plastid | 24.43 | 51.61 |
| KRH29740 | Soybean | cytosol | 19.08 | 51.02 |
| VIT_06s0004g05450.t01 | Wine grape | plasma membrane | 34.73 | 50.56 |
| CDX98898 | Canola | cytosol, peroxisome, plasma membrane | 55.73 | 47.1 |
| CDX97890 | Canola | cytosol | 60.69 | 46.9 |
| GSMUA_Achr5P04570_001 | Banana | cytosol | 22.14 | 45.67 |
| CDY65683 | Canola | cytosol, mitochondrion | 67.94 | 44.61 |
| CDY35231 | Canola | peroxisome | 16.03 | 33.87 |
| CDY31767 | Canola | plastid | 71.37 | 33.21 |
| CDY16690 | Canola | peroxisome | 28.63 | 29.41 |
| CDX94534 | Canola | peroxisome | 28.24 | 29.02 |
| CDX76382 | Canola | cytosol, mitochondrion, peroxisome | 27.86 | 28.4 |
| CDY27447 | Canola | cytosol, mitochondrion, peroxisome | 27.86 | 28.29 |
| CDY50145 | Canola | plastid | 77.1 | 27.9 |
| CDY43488 | Canola | cytosol | 29.39 | 26.64 |
| CDY17559 | Canola | cytoskeleton, nucleus, peroxisome | 28.24 | 25.78 |
| CDY27781 | Canola | cytosol, peroxisome, plastid | 28.24 | 25.61 |
| CDY05152 | Canola | cytosol | 21.76 | 23.85 |
| CDY08402 | Canola | cytosol | 24.43 | 21.77 |
| CDY00799 | Canola | peroxisome | 24.05 | 21.14 |
| CDX73802 | Canola | peroxisome | 24.05 | 21.14 |
| CDY05153 | Canola | cytosol, nucleus, plastid | 4.96 | 18.57 |
Protein Annotations
| EnsemblPlants:CDY40165 | EnsemblPlantsGene:GSBRNA2T00069289001 | Gene3D:3.40.50.720 | GO:A0A078HNQ1 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
| PANTHER:PTHR42898 | PANTHER:PTHR42898:SF7 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ProteinID:CDY40165 |
| ProteinID:CDY40165.1 | SEG:seg | SUPFAM:SSF51735 | UniParc:UPI0004EEBC38 | UniProt:A0A078HNQ1 | MapMan:50.1.1 |
Description
BnaC04g13930DBnaC04g13930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HNQ1]
Coordinates
chrLK032465:+:37370..38647
Molecular Weight (calculated)
28358.0 Da
IEP (calculated)
5.698
GRAVY (calculated)
0.039
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKRWSLQGM TALVTGGASG IGHAIVEELA SFGATLYVCD ISETLLNASL SEWEQKGFQV SGSICDLSSR RERERLMQTI SKMFDGKLNI LVNNVGVVRV
101: KPTTEYVAED FSFHISTNLE SAYHLTQLSH PLLKASGFGS IVMNSSVGGV VSMECGSLYS LTKGAMNQLA RSLACEWATD GIRTNSVAPN FILTDMNEPI
201: LEDDCYKKSL FSRTPLGRAR EPKEVASLVA FLCLPAASYI TGQTICVDGG LTVNGFSYQP KA
101: KPTTEYVAED FSFHISTNLE SAYHLTQLSH PLLKASGFGS IVMNSSVGGV VSMECGSLYS LTKGAMNQLA RSLACEWATD GIRTNSVAPN FILTDMNEPI
201: LEDDCYKKSL FSRTPLGRAR EPKEVASLVA FLCLPAASYI TGQTICVDGG LTVNGFSYQP KA
001: MDKRWSLQGM TALVTGGASG IGHAIVEELA GLGARIYVCD ISETLLNQSL SEWEKKGFQV SGSICDVSSH SERETLMQTV SKMFDGKLNI LVNNVGVVNP
101: KPTIEYVAAD FSFSISTNLE SAYHLSQLSH PLLKASEFGS IIFISSVGGV VSMECGSIYS LTKGALNQLA KTLACEWARD GIRANSVAPN FIYTAMAQPF
201: FKDADYEKSL VSRTPLGRAG EPNEVSSLVA FLCLPAASYI TGQTICVDGG LTVNGFSYKP QA
101: KPTIEYVAAD FSFSISTNLE SAYHLSQLSH PLLKASEFGS IIFISSVGGV VSMECGSIYS LTKGALNQLA KTLACEWARD GIRANSVAPN FIYTAMAQPF
201: FKDADYEKSL VSRTPLGRAG EPNEVSSLVA FLCLPAASYI TGQTICVDGG LTVNGFSYKP QA
Arabidopsis Description
Tropinone reductase homolog At2g30670 [Source:UniProtKB/Swiss-Prot;Acc:O49332]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.