Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 1
- peroxisome 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| CDX95752 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G29320.1 | CDX95752 | AT2G29310.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83307 | Canola | peroxisome | 96.56 | 96.56 |
| CDY40182 | Canola | cytosol, peroxisome, plastid | 85.11 | 85.11 |
| CDY31768 | Canola | cytosol, peroxisome, plastid | 84.35 | 84.35 |
| CDY31773 | Canola | plastid | 84.35 | 84.35 |
| AT2G29320.1 | Thale cress | mitochondrion | 86.26 | 84.01 |
| CDY45432 | Canola | cytosol | 83.59 | 83.59 |
| CDY40188 | Canola | cytosol, peroxisome, plasma membrane | 83.59 | 83.59 |
| CDY45435 | Canola | cytosol, peroxisome, plastid | 82.82 | 82.82 |
| CDY31772 | Canola | cytosol, peroxisome, plastid | 82.82 | 82.82 |
| CDX83306 | Canola | plastid | 82.82 | 82.82 |
| CDY40186 | Canola | cytosol | 65.27 | 82.61 |
| CDX97897 | Canola | cytosol, extracellular | 72.14 | 81.82 |
| CDX95753 | Canola | cytosol, peroxisome, plastid | 81.68 | 81.68 |
| CDX97899 | Canola | peroxisome | 81.3 | 81.3 |
| CDY40185 | Canola | plastid | 79.01 | 79.01 |
| CDY40175 | Canola | plasma membrane | 76.72 | 76.72 |
| AT2G29300.2 | Thale cress | extracellular | 83.59 | 76.57 |
| CDY45438 | Canola | cytosol | 75.57 | 75.57 |
| CDY40183 | Canola | plastid | 75.19 | 75.19 |
| CDY45434 | Canola | cytosol, nucleus, plastid | 75.19 | 75.19 |
| CDY45433 | Canola | cytosol | 70.23 | 75.1 |
| CDY40165 | Canola | plastid | 74.81 | 74.81 |
| CDY45441 | Canola | cytosol | 63.36 | 74.11 |
| CDY40179 | Canola | cytosol, peroxisome, plastid | 73.66 | 73.95 |
| CDY62820 | Canola | cytosol, endoplasmic reticulum, peroxisome | 74.05 | 73.76 |
| CDY31774 | Canola | cytosol | 65.65 | 73.19 |
| CDX97895 | Canola | cytosol | 65.65 | 73.19 |
| CDY40171 | Canola | cytosol | 61.45 | 72.85 |
| CDX86486 | Canola | cytosol, peroxisome, plastid | 70.23 | 70.23 |
| CDY31770 | Canola | plastid | 60.69 | 68.53 |
| CDY09917 | Canola | cytosol | 68.32 | 68.32 |
| CDX95752 | Canola | cytosol | 61.83 | 68.07 |
| CDY68057 | Canola | cytosol | 67.94 | 67.94 |
| CDY06260 | Canola | plastid | 66.79 | 66.79 |
| CDX86485 | Canola | cytosol, peroxisome, plastid | 65.65 | 65.65 |
| CDY10276 | Canola | mitochondrion | 66.41 | 65.41 |
| CDY14610 | Canola | mitochondrion | 66.41 | 65.41 |
| CDY06706 | Canola | mitochondrion | 66.03 | 65.04 |
| CDY52942 | Canola | mitochondrion | 64.89 | 63.91 |
| CDY64214 | Canola | mitochondrion | 41.22 | 63.16 |
| CDY16437 | Canola | mitochondrion | 64.12 | 63.16 |
| CDY40177 | Canola | cytosol | 66.03 | 62.45 |
| CDY04977 | Canola | peroxisome | 62.21 | 61.98 |
| CDX98899 | Canola | peroxisome | 61.83 | 61.83 |
| Solyc03g096650.1.1 | Tomato | cytosol | 20.99 | 61.8 |
| CDY14094 | Canola | peroxisome | 61.45 | 61.22 |
| CDX70101 | Canola | peroxisome | 60.69 | 60.69 |
| VIT_06s0004g05370.t01 | Wine grape | peroxisome | 57.63 | 59.92 |
| CDY04975 | Canola | mitochondrion | 25.57 | 59.82 |
| VIT_06s0004g05320.t01 | Wine grape | endoplasmic reticulum, peroxisome, plastid | 57.25 | 59.52 |
| KRH24733 | Soybean | nucleus | 59.92 | 59.25 |
| KRH24731 | Soybean | nucleus | 59.92 | 58.8 |
| CDY31776 | Canola | cytosol, peroxisome, plastid | 60.69 | 58.67 |
| CDY09823 | Canola | peroxisome | 60.69 | 58.67 |
| CDY09824 | Canola | mitochondrion | 60.69 | 58.67 |
| CDX97893 | Canola | mitochondrion | 60.69 | 58.67 |
| VIT_06s0004g05380.t01 | Wine grape | plastid | 60.31 | 58.52 |
| CDY16436 | Canola | endoplasmic reticulum, vacuole | 23.28 | 58.1 |
| VIT_06s0004g05400.t01 | Wine grape | cytosol | 24.43 | 57.66 |
| CDX95750 | Canola | cytosol | 59.54 | 56.93 |
| KRH24732 | Soybean | cytosol, endoplasmic reticulum, plastid | 58.4 | 56.88 |
| VIT_06s0004g05330.t01 | Wine grape | peroxisome | 54.96 | 56.69 |
| VIT_06s0004g05430.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 58.02 | 56.3 |
| VIT_06s0004g05440.t01 | Wine grape | cytosol | 17.56 | 56.1 |
| VIT_06s0004g05310.t01 | Wine grape | cytosol | 24.05 | 55.75 |
| VIT_06s0004g05360.t01 | Wine grape | cytosol, mitochondrion, plastid | 50.38 | 55.0 |
| CDY51372 | Canola | plastid | 57.63 | 54.12 |
| CDY35991 | Canola | plastid | 25.57 | 54.03 |
| CDY72061 | Canola | cytosol | 22.14 | 53.21 |
| KRH29740 | Soybean | cytosol | 19.08 | 51.02 |
| VIT_06s0004g05390.t01 | Wine grape | cytosol, plasma membrane, plastid | 47.33 | 50.41 |
| VIT_06s0004g05450.t01 | Wine grape | plasma membrane | 32.82 | 47.78 |
| CDX98898 | Canola | cytosol, peroxisome, plasma membrane | 56.49 | 47.74 |
| CDX97890 | Canola | cytosol | 58.4 | 45.13 |
| GSMUA_Achr5P04570_001 | Banana | cytosol | 21.37 | 44.09 |
| CDY65683 | Canola | cytosol, mitochondrion | 65.65 | 43.11 |
| CDY35231 | Canola | peroxisome | 17.56 | 37.1 |
| CDY31767 | Canola | plastid | 72.9 | 33.93 |
| CDY16690 | Canola | peroxisome | 29.77 | 30.59 |
| CDY50145 | Canola | plastid | 83.97 | 30.39 |
| CDX94534 | Canola | peroxisome | 29.39 | 30.2 |
| CDX76382 | Canola | cytosol, mitochondrion, peroxisome | 29.01 | 29.57 |
| CDY27447 | Canola | cytosol, mitochondrion, peroxisome | 29.01 | 29.46 |
| CDY43488 | Canola | cytosol | 27.86 | 25.26 |
| CDY27781 | Canola | cytosol, peroxisome, plastid | 27.86 | 25.26 |
| CDY17559 | Canola | cytoskeleton, nucleus, peroxisome | 26.72 | 24.39 |
| CDY05152 | Canola | cytosol | 21.37 | 23.43 |
| CDY08402 | Canola | cytosol | 23.66 | 21.09 |
| CDY00799 | Canola | peroxisome | 23.66 | 20.81 |
| CDX73802 | Canola | peroxisome | 23.66 | 20.81 |
| CDY05153 | Canola | cytosol, nucleus, plastid | 5.34 | 20.0 |
Protein Annotations
| EnsemblPlants:CDX95751 | EnsemblPlantsGene:GSBRNA2T00101659001 | Gene3D:3.40.50.720 | GO:A0A078E333 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | InterPro:Sc_DH/Rdtase_CS |
| PANTHER:PTHR42898 | PANTHER:PTHR42898:SF7 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ProteinID:CDX95751 |
| ProteinID:CDX95751.1 | ScanProsite:PS00061 | SUPFAM:SSF51735 | UniParc:UPI0004EE9B03 | MapMan:50.1.1 | : |
Description
BnaC03g26320D
Coordinates
chrLK031890:-:1153394..1154701
Molecular Weight (calculated)
28351.7 Da
IEP (calculated)
6.507
GRAVY (calculated)
0.021
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKRWSLQGM SALVTGGASG IGYAIVEELA NFGAKIHVRD ISETLLNQSL NEWEKKGFQV KGSVCDVTSR SERETLIQNV SSLFDGKLNI LVNNVGVLRG
101: KPTIEYVAED FAYHSSTNLE AAFHFCQLSH PLLKASGYGS IVFLSSVAGV VSFEYGSIYG VTKGSLNQLA RNLACEWAKD GIRANAVAPN VVKTRQSQSY
201: LEDVSFKEEL FCRTPLGRAG EPNEVASLVV FLCLPAASYI TGQTICVDGG LTVNGFSYQS RA
101: KPTIEYVAED FAYHSSTNLE AAFHFCQLSH PLLKASGYGS IVFLSSVAGV VSFEYGSIYG VTKGSLNQLA RNLACEWAKD GIRANAVAPN VVKTRQSQSY
201: LEDVSFKEEL FCRTPLGRAG EPNEVASLVV FLCLPAASYI TGQTICVDGG LTVNGFSYQS RA
001: MDKRWSLQGM TALVTGAASG IGYAIVEELA GFGARIHVCD ISETLLNQSL REWEKKGFQV SGSVCDVTSR PEREKLMQTV SSLFDGKLNI LVNNVGVLRA
101: KPTTEYVADD FTFHISTNLE AAYHFCQLSH PLLKTSGYGS IVFLSSVSGV VSITDCGSLY GLTKGALNQL ARNLACEWAK DGIRANAVAP NVVKTAQSQF
201: FLQDVSKKEG LFSRTPLGRS GEPNEVASLV VFLCLPAASY ITGQTICIDG GLTVYGFSSQ PQA
101: KPTTEYVADD FTFHISTNLE AAYHFCQLSH PLLKTSGYGS IVFLSSVSGV VSITDCGSLY GLTKGALNQL ARNLACEWAK DGIRANAVAP NVVKTAQSQF
201: FLQDVSKKEG LFSRTPLGRS GEPNEVASLV VFLCLPAASY ITGQTICIDG GLTVYGFSSQ PQA
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IKL5]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.