Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31773 | Canola | plastid | 96.97 | 85.5 |
| Bra039973.1-P | Field mustard | plastid | 96.54 | 85.11 |
| CDY31772 | Canola | cytosol, peroxisome, plastid | 88.74 | 78.24 |
| CDY31768 | Canola | cytosol, peroxisome, plastid | 87.88 | 77.48 |
| CDX97899 | Canola | peroxisome | 86.15 | 75.95 |
| CDY40188 | Canola | cytosol, peroxisome, plasma membrane | 83.55 | 73.66 |
| CDY45432 | Canola | cytosol | 83.55 | 73.66 |
| CDX83307 | Canola | peroxisome | 82.68 | 72.9 |
| CDX95751 | Canola | peroxisome | 81.82 | 72.14 |
| CDY40182 | Canola | cytosol, peroxisome, plastid | 80.95 | 71.37 |
| CDX83306 | Canola | plastid | 80.09 | 70.61 |
| CDY45435 | Canola | cytosol, peroxisome, plastid | 80.09 | 70.61 |
| CDY40186 | Canola | cytosol | 63.2 | 70.53 |
| CDX95753 | Canola | cytosol, peroxisome, plastid | 79.65 | 70.23 |
| CDY40185 | Canola | plastid | 79.65 | 70.23 |
| CDY40175 | Canola | plasma membrane | 77.49 | 68.32 |
| CDY45434 | Canola | cytosol, nucleus, plastid | 77.06 | 67.94 |
| CDY40183 | Canola | plastid | 76.19 | 67.18 |
| CDY40165 | Canola | plastid | 76.19 | 67.18 |
| CDY40179 | Canola | cytosol, peroxisome, plastid | 75.76 | 67.05 |
| CDY45438 | Canola | cytosol | 75.76 | 66.79 |
| CDY62820 | Canola | cytosol, endoplasmic reticulum, peroxisome | 75.32 | 66.16 |
| CDY31774 | Canola | cytosol | 67.1 | 65.96 |
| CDX97895 | Canola | cytosol | 67.1 | 65.96 |
| CDY45433 | Canola | cytosol | 69.26 | 65.31 |
| CDY45441 | Canola | cytosol | 61.9 | 63.84 |
| CDY40171 | Canola | cytosol | 60.61 | 63.35 |
| CDX86486 | Canola | cytosol, peroxisome, plastid | 71.0 | 62.6 |
| CDY68057 | Canola | cytosol | 69.26 | 61.07 |
| CDY31770 | Canola | plastid | 60.61 | 60.34 |
| CDY09917 | Canola | cytosol | 67.53 | 59.54 |
| CDY06260 | Canola | plastid | 66.67 | 58.78 |
| CDX86485 | Canola | cytosol, peroxisome, plastid | 66.67 | 58.78 |
| CDY16436 | Canola | endoplasmic reticulum, vacuole | 26.41 | 58.1 |
| CDY04975 | Canola | mitochondrion | 28.14 | 58.04 |
| CDY06706 | Canola | mitochondrion | 65.8 | 57.14 |
| CDY14610 | Canola | mitochondrion | 65.8 | 57.14 |
| CDY10276 | Canola | mitochondrion | 65.8 | 57.14 |
| CDX95752 | Canola | cytosol | 58.87 | 57.14 |
| CDY52942 | Canola | mitochondrion | 65.37 | 56.77 |
| CDY16437 | Canola | mitochondrion | 64.07 | 55.64 |
| CDY40177 | Canola | cytosol | 66.23 | 55.23 |
| CDY35991 | Canola | plastid | 28.14 | 52.42 |
| CDX98899 | Canola | peroxisome | 59.31 | 52.29 |
| CDY04977 | Canola | peroxisome | 59.31 | 52.09 |
| CDX70101 | Canola | peroxisome | 58.44 | 51.53 |
| CDY14094 | Canola | peroxisome | 58.44 | 51.33 |
| KRH24733 | Soybean | nucleus | 58.87 | 51.32 |
| VIT_06s0004g05320.t01 | Wine grape | endoplasmic reticulum, peroxisome, plastid | 55.41 | 50.79 |
| KRH24731 | Soybean | nucleus | 58.01 | 50.19 |
| CDY31776 | Canola | cytosol, peroxisome, plastid | 58.87 | 50.18 |
| VIT_06s0004g05370.t01 | Wine grape | peroxisome | 54.55 | 50.0 |
| VIT_06s0004g05380.t01 | Wine grape | plastid | 58.01 | 49.63 |
| CDX97893 | Canola | mitochondrion | 58.01 | 49.45 |
| CDY09824 | Canola | mitochondrion | 58.01 | 49.45 |
| CDY09823 | Canola | peroxisome | 58.01 | 49.45 |
| VIT_06s0004g05430.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 57.58 | 49.26 |
| CDY64214 | Canola | mitochondrion | 35.93 | 48.54 |
| KRH24732 | Soybean | cytosol, endoplasmic reticulum, plastid | 55.84 | 47.96 |
| VIT_06s0004g05450.t01 | Wine grape | plasma membrane | 36.8 | 47.22 |
| CDX95750 | Canola | cytosol | 55.84 | 47.08 |
| CDY51372 | Canola | plastid | 56.71 | 46.95 |
| VIT_06s0004g05330.t01 | Wine grape | peroxisome | 51.52 | 46.85 |
| VIT_06s0004g05360.t01 | Wine grape | cytosol, mitochondrion, plastid | 47.19 | 45.42 |
| VIT_06s0004g05390.t01 | Wine grape | cytosol, plasma membrane, plastid | 45.02 | 42.28 |
| CDX98898 | Canola | cytosol, peroxisome, plasma membrane | 54.98 | 40.97 |
| Solyc03g096650.1.1 | Tomato | cytosol | 15.58 | 40.45 |
| CDX97890 | Canola | cytosol | 57.58 | 39.23 |
| VIT_06s0004g05440.t01 | Wine grape | cytosol | 13.42 | 37.8 |
| CDY65683 | Canola | cytosol, mitochondrion | 64.94 | 37.59 |
| VIT_06s0004g05400.t01 | Wine grape | cytosol | 17.32 | 36.04 |
| CDY72061 | Canola | cytosol | 16.88 | 35.78 |
| VIT_06s0004g05310.t01 | Wine grape | cytosol | 17.32 | 35.4 |
| CDY35231 | Canola | peroxisome | 18.61 | 34.68 |
| GSMUA_Achr5P04570_001 | Banana | cytosol | 18.61 | 33.86 |
| KRH29740 | Soybean | cytosol | 12.55 | 29.59 |
| CDY31767 | Canola | plastid | 71.43 | 29.31 |
| CDY50145 | Canola | plastid | 88.31 | 28.18 |
| CDY16690 | Canola | peroxisome | 27.27 | 24.71 |
| CDX94534 | Canola | peroxisome | 26.84 | 24.31 |
| CDX76382 | Canola | cytosol, mitochondrion, peroxisome | 26.84 | 24.12 |
| CDY27447 | Canola | cytosol, mitochondrion, peroxisome | 26.84 | 24.03 |
| CDY43488 | Canola | cytosol | 29.44 | 23.53 |
| CDY27781 | Canola | cytosol, peroxisome, plastid | 28.57 | 22.84 |
| CDY17559 | Canola | cytoskeleton, nucleus, peroxisome | 28.14 | 22.65 |
| CDY05152 | Canola | cytosol | 21.21 | 20.5 |
| CDX73802 | Canola | peroxisome | 23.38 | 18.12 |
| CDY00799 | Canola | peroxisome | 23.38 | 18.12 |
| CDY08402 | Canola | cytosol | 22.94 | 18.03 |
| CDY05153 | Canola | cytosol, nucleus, plastid | 5.19 | 17.14 |
Protein Annotations
| EnsemblPlants:CDX97897 | EnsemblPlantsGene:GSBRNA2T00105237001 | Gene3D:3.40.50.720 | GO:A0A078EA48 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
| PANTHER:PTHR42898 | PANTHER:PTHR42898:SF7 | PFAM:PF00106 | PFAM:PF13561 | PRINTS:PR00081 | ProteinID:CDX97897 |
| ProteinID:CDX97897.1 | SUPFAM:SSF51735 | UniParc:UPI0004EE12D5 | MapMan:50.1.1 | : | : |
Description
BnaC04g40420D
Coordinates
chrLK031901:-:1287184..1289033
Molecular Weight (calculated)
24748.4 Da
IEP (calculated)
6.504
GRAVY (calculated)
0.031
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKRWSLQGM TALVTGGAAG IGYAIVEELA SFGAKVHVCD ISETLLNQSL SEWEKKGFKV SEQWGVLRGK QTTEYGADDF AFHISTNLES AYHFCQLSHP
101: LLKASGYGSI VFMSSVSRAV SINGASIYSL TKGALNQLAR NLACEWAKDG IRANAVAPNI IKTPQAQPYL EDVSFREGLF GRTPLGRAGE PNEVAALVVF
201: LCLPAASYIT GQTICADGGL TVNGFSYQPQ A
101: LLKASGYGSI VFMSSVSRAV SINGASIYSL TKGALNQLAR NLACEWAKDG IRANAVAPNI IKTPQAQPYL EDVSFREGLF GRTPLGRAGE PNEVAALVVF
201: LCLPAASYIT GQTICADGGL TVNGFSYQPQ A
001: MDKRWSLQGM TALVTGAASG IGYAIVEELA GFGARIHVCD ISETLLNQSL REWEKKGFQV SGSVCDVTSR PEREKLMQTV SSLFDGKLNI LVNNVGVLRA
101: KPTTEYVADD FTFHISTNLE AAYHFCQLSH PLLKTSGYGS IVFLSSVSGV VSITDCGSLY GLTKGALNQL ARNLACEWAK DGIRANAVAP NVVKTAQSQF
201: FLQDVSKKEG LFSRTPLGRS GEPNEVASLV VFLCLPAASY ITGQTICIDG GLTVYGFSSQ PQA
101: KPTTEYVADD FTFHISTNLE AAYHFCQLSH PLLKTSGYGS IVFLSSVSGV VSITDCGSLY GLTKGALNQL ARNLACEWAK DGIRANAVAP NVVKTAQSQF
201: FLQDVSKKEG LFSRTPLGRS GEPNEVASLV VFLCLPAASY ITGQTICIDG GLTVYGFSSQ PQA
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IKL5]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.