CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 3
mitochondrion 3
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039755.1-P	Field mustard	mitochondrion	100.0	100.0
CDY52942	Canola	mitochondrion	97.37	97.37
CDY16436	Canola	endoplasmic reticulum, vacuole	35.71	90.48
CDY64214	Canola	mitochondrion	57.52	89.47
CDY14610	Canola	mitochondrion	80.08	80.08
CDY10276	Canola	mitochondrion	80.08	80.08
CDY06706	Canola	mitochondrion	79.7	79.7
CDX86486	Canola	cytosol, peroxisome, plastid	69.17	70.23
CDY68057	Canola	cytosol	69.17	70.23
CDY40183	Canola	plastid	67.67	68.7
CDY45434	Canola	cytosol, nucleus, plastid	67.67	68.7
CDY45438	Canola	cytosol	67.67	68.7
CDY40188	Canola	cytosol, peroxisome, plasma membrane	67.29	68.32
VIT_06s0004g05440.t01	Wine grape	cytosol	21.05	68.29
CDX86485	Canola	cytosol, peroxisome, plastid	66.92	67.94
CDY45441	Canola	cytosol	57.14	67.86
CDY09917	Canola	cytosol	66.54	67.56
CDY31772	Canola	cytosol, peroxisome, plastid	66.54	67.56
CDY40179	Canola	cytosol, peroxisome, plastid	66.17	67.43
CDY45432	Canola	cytosol	66.17	67.18
CDY31768	Canola	cytosol, peroxisome, plastid	66.17	67.18
CDY31774	Canola	cytosol	59.02	66.81
CDX97899	Canola	peroxisome	65.79	66.79
CDY06260	Canola	plastid	65.79	66.79
CDY40165	Canola	plastid	65.79	66.79
CDY40186	Canola	cytosol	51.88	66.67
CDY62820	Canola	cytosol, endoplasmic reticulum, peroxisome	65.79	66.54
CDX97895	Canola	cytosol	58.65	66.38
CDY40175	Canola	plasma membrane	65.04	66.03
VIT_06s0004g05400.t01	Wine grape	cytosol	27.44	65.77
CDY45435	Canola	cytosol, peroxisome, plastid	64.66	65.65
VIT_06s0004g05310.t01	Wine grape	cytosol	27.82	65.49
VIT_06s0004g05320.t01	Wine grape	endoplasmic reticulum, peroxisome, plastid	62.03	65.48
CDY31773	Canola	plastid	64.29	65.27
CDY40185	Canola	plastid	64.29	65.27
CDY40182	Canola	cytosol, peroxisome, plastid	63.91	64.89
CDX83307	Canola	peroxisome	63.91	64.89
CDY40171	Canola	cytosol	53.76	64.71
CDX97893	Canola	mitochondrion	65.41	64.21
CDY09824	Canola	mitochondrion	65.41	64.21
CDY09823	Canola	peroxisome	65.41	64.21
CDX95751	Canola	peroxisome	63.16	64.12
CDX97897	Canola	cytosol, extracellular	55.64	64.07
CDX83306	Canola	plastid	62.78	63.74
VIT_06s0004g05430.t01	Wine grape	mitochondrion, nucleus, peroxisome	64.29	63.33
VIT_06s0004g05380.t01	Wine grape	plastid	64.29	63.33
CDY31776	Canola	cytosol, peroxisome, plastid	64.29	63.1
KRH24731	Soybean	nucleus	63.16	62.92
CDY45433	Canola	cytosol	57.89	62.86
VIT_06s0004g05370.t01	Wine grape	peroxisome	59.4	62.7
CDX95753	Canola	cytosol, peroxisome, plastid	61.65	62.6
CDY31770	Canola	plastid	54.51	62.5
CDX98899	Canola	peroxisome	61.28	62.21
CDX95750	Canola	cytosol	63.53	61.68
CDY14094	Canola	peroxisome	60.53	61.22
CDY04977	Canola	peroxisome	60.53	61.22
VIT_06s0004g05330.t01	Wine grape	peroxisome	58.27	61.02
CDX70101	Canola	peroxisome	59.77	60.69
Solyc03g096650.1.1	Tomato	cytosol	20.3	60.67
CDY65683	Canola	cytosol, mitochondrion	89.1	59.4
KRH24733	Soybean	nucleus	59.02	59.25
CDY51372	Canola	plastid	61.65	58.78
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	59.02	58.36
CDY72061	Canola	cytosol	23.68	57.8
CDY35991	Canola	plastid	26.69	57.26
CDY04975	Canola	mitochondrion	24.06	57.14
VIT_06s0004g05360.t01	Wine grape	cytosol, mitochondrion, plastid	51.5	57.08
CDX95752	Canola	cytosol	50.38	56.3
GSMUA_Achr5P04570_001	Banana	cytosol	26.69	55.91
CDY40177	Canola	cytosol	57.52	55.23
VIT_06s0004g05390.t01	Wine grape	cytosol, plasma membrane, plastid	50.0	54.06
VIT_06s0004g05450.t01	Wine grape	plasma membrane	36.47	53.89
KRH29740	Soybean	cytosol	19.55	53.06
CDX98898	Canola	cytosol, peroxisome, plasma membrane	57.14	49.03
CDX97890	Canola	cytosol	61.65	48.38
CDY35231	Canola	peroxisome	15.79	33.87
CDY31767	Canola	plastid	69.17	32.68
CDX94534	Canola	peroxisome	31.2	32.55
CDY16690	Canola	peroxisome	31.2	32.55
CDY27447	Canola	cytosol, mitochondrion, peroxisome	29.7	30.62
CDX76382	Canola	cytosol, mitochondrion, peroxisome	29.32	30.35
CDY43488	Canola	cytosol	28.95	26.64
CDY17559	Canola	cytoskeleton, nucleus, peroxisome	28.2	26.13
CDY27781	Canola	cytosol, peroxisome, plastid	27.82	25.61
CDY50145	Canola	plastid	67.67	24.86
CDY00799	Canola	peroxisome	26.69	23.83
CDX73802	Canola	peroxisome	26.69	23.83
CDY08402	Canola	cytosol	25.94	23.47
CDY05152	Canola	cytosol	19.92	22.18
CDY05153	Canola	cytosol, nucleus, plastid	5.64	21.43

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	GO:A0A078FUB7	UniProt:A0A078FUB7	EnsemblPlants:CDY16437	ProteinID:CDY16437
ProteinID:CDY16437.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00090994001	InterPro:NAD(P)-bd_dom_sf	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081
ScanProsite:PS00061	PANTHER:PTHR42898	PANTHER:PTHR42898:SF7	InterPro:SDR_fam	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS
UniParc:UPI0001AE617E	SEG:seg	:	:	:	:

Description

BnaA02g12410DBnaA02g12410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FUB7]

Coordinates

chrLK032063:-:678945..682213

Molecular Weight (calculated)

28592.0 Da

IEP (calculated)

6.705

GRAVY (calculated)

0.032

Length

266 amino acids

Sequence
(BLAST)

001: MAGEEQRRRW SLQGKTALVT GGTKGIGHAI VEELAGFGVI IHTCARDEAH LNECLSKWKN KGFQVTGSVC DVSSWTEREK LMQTVYSLFD AKLSILINNA
101: GAIRSKPTIE HTAEDFSFHI STNLESAYHF SQLAHPLLKA SGCGNIVFIS SISGVVSLSI SSIYSATKGA MNQLARNLAC EWASDSIRAN SVAPTFIATP
201: LVDNAFDDEF KKVVESTNPL GRIGKPEEVA SVVAFLCMPA ASYITGQTIC VDGGLSVNGF SYQPHA

Best Arabidopsis Sequence Match ( AT1G07440.1 )
(BLAST)

001: MAGAEQSQRW SLKAKTVLVT GGTKGIGHAI VEEFAGFGAV IHTCARNEYE LNECLSKWQK KGFQVTGSVC DASLRPEREK LMQTVSSMFG GKLDILINNL
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG

Arabidopsis Description

Tropinone reductase homolog At1g07440 [Source:UniProtKB/Swiss-Prot;Acc:P0DKI3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.