Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04975 | Canola | mitochondrion | 52.38 | 49.11 |
| CDY35991 | Canola | plastid | 42.86 | 36.29 |
| Bra039755.1-P | Field mustard | mitochondrion | 90.48 | 35.71 |
| CDY16437 | Canola | mitochondrion | 90.48 | 35.71 |
| CDY52942 | Canola | mitochondrion | 86.67 | 34.21 |
| CDY40186 | Canola | cytosol | 61.9 | 31.4 |
| CDY45441 | Canola | cytosol | 61.9 | 29.02 |
| VIT_06s0004g05450.t01 | Wine grape | plasma membrane | 48.57 | 28.33 |
| CDY14610 | Canola | mitochondrion | 71.43 | 28.2 |
| CDY10276 | Canola | mitochondrion | 71.43 | 28.2 |
| CDY06706 | Canola | mitochondrion | 71.43 | 28.2 |
| CDX97897 | Canola | cytosol, extracellular | 58.1 | 26.41 |
| CDY40188 | Canola | cytosol, peroxisome, plasma membrane | 65.71 | 26.34 |
| CDY45432 | Canola | cytosol | 65.71 | 26.34 |
| CDY45434 | Canola | cytosol, nucleus, plastid | 64.76 | 25.95 |
| CDY40183 | Canola | plastid | 64.76 | 25.95 |
| CDY45435 | Canola | cytosol, peroxisome, plastid | 63.81 | 25.57 |
| CDY40165 | Canola | plastid | 62.86 | 25.19 |
| CDY35231 | Canola | peroxisome | 29.52 | 25.0 |
| CDY31768 | Canola | cytosol, peroxisome, plastid | 61.9 | 24.81 |
| CDY40182 | Canola | cytosol, peroxisome, plastid | 61.9 | 24.81 |
| CDY09917 | Canola | cytosol | 61.9 | 24.81 |
| CDY62820 | Canola | cytosol, endoplasmic reticulum, peroxisome | 61.9 | 24.71 |
| CDY45438 | Canola | cytosol | 60.95 | 24.43 |
| CDY68057 | Canola | cytosol | 60.95 | 24.43 |
| CDY06260 | Canola | plastid | 60.95 | 24.43 |
| CDX86486 | Canola | cytosol, peroxisome, plastid | 60.95 | 24.43 |
| CDX97899 | Canola | peroxisome | 60.0 | 24.05 |
| CDY31772 | Canola | cytosol, peroxisome, plastid | 60.0 | 24.05 |
| CDY40185 | Canola | plastid | 60.0 | 24.05 |
| CDY40179 | Canola | cytosol, peroxisome, plastid | 59.05 | 23.75 |
| CDX86485 | Canola | cytosol, peroxisome, plastid | 59.05 | 23.66 |
| CDY40175 | Canola | plasma membrane | 59.05 | 23.66 |
| CDX95751 | Canola | peroxisome | 58.1 | 23.28 |
| CDX83307 | Canola | peroxisome | 58.1 | 23.28 |
| CDX83306 | Canola | plastid | 57.14 | 22.9 |
| CDY31773 | Canola | plastid | 57.14 | 22.9 |
| VIT_06s0004g05330.t01 | Wine grape | peroxisome | 55.24 | 22.83 |
| CDX95752 | Canola | cytosol | 51.43 | 22.69 |
| VIT_06s0004g05320.t01 | Wine grape | endoplasmic reticulum, peroxisome, plastid | 54.29 | 22.62 |
| CDY09824 | Canola | mitochondrion | 58.1 | 22.51 |
| CDY09823 | Canola | peroxisome | 58.1 | 22.51 |
| CDX97893 | Canola | mitochondrion | 58.1 | 22.51 |
| KRH24731 | Soybean | nucleus | 57.14 | 22.47 |
| CDY45433 | Canola | cytosol | 52.38 | 22.45 |
| VIT_06s0004g05370.t01 | Wine grape | peroxisome | 53.33 | 22.22 |
| CDY31776 | Canola | cytosol, peroxisome, plastid | 57.14 | 22.14 |
| CDX95753 | Canola | cytosol, peroxisome, plastid | 55.24 | 22.14 |
| CDX98899 | Canola | peroxisome | 55.24 | 22.14 |
| KRH24732 | Soybean | cytosol, endoplasmic reticulum, plastid | 56.19 | 21.93 |
| CDX95750 | Canola | cytosol | 57.14 | 21.9 |
| CDY14094 | Canola | peroxisome | 54.29 | 21.67 |
| CDY04977 | Canola | peroxisome | 54.29 | 21.67 |
| CDX70101 | Canola | peroxisome | 53.33 | 21.37 |
| VIT_06s0004g05430.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 54.29 | 21.11 |
| KRH24733 | Soybean | nucleus | 52.38 | 20.75 |
| VIT_06s0004g05380.t01 | Wine grape | plastid | 53.33 | 20.74 |
| CDY51372 | Canola | plastid | 53.33 | 20.07 |
| CDY65683 | Canola | cytosol, mitochondrion | 76.19 | 20.05 |
| CDY31774 | Canola | cytosol | 44.76 | 20.0 |
| CDX97895 | Canola | cytosol | 44.76 | 20.0 |
| CDX97890 | Canola | cytosol | 56.19 | 17.4 |
| CDX98898 | Canola | cytosol, peroxisome, plasma membrane | 50.48 | 17.1 |
| VIT_06s0004g05390.t01 | Wine grape | cytosol, plasma membrane, plastid | 40.0 | 17.07 |
| CDY31770 | Canola | plastid | 34.29 | 15.52 |
| VIT_06s0004g05360.t01 | Wine grape | cytosol, mitochondrion, plastid | 35.24 | 15.42 |
| CDY40177 | Canola | cytosol | 39.05 | 14.8 |
| CDY05152 | Canola | cytosol | 31.43 | 13.81 |
| CDY40171 | Canola | cytosol | 27.62 | 13.12 |
| CDY27447 | Canola | cytosol, mitochondrion, peroxisome | 30.48 | 12.4 |
| CDY16690 | Canola | peroxisome | 29.52 | 12.16 |
| CDX94534 | Canola | peroxisome | 29.52 | 12.16 |
| CDY43488 | Canola | cytosol | 33.33 | 12.11 |
| CDY27781 | Canola | cytosol, peroxisome, plastid | 33.33 | 12.11 |
| CDX76382 | Canola | cytosol, mitochondrion, peroxisome | 29.52 | 12.06 |
| CDY31767 | Canola | plastid | 62.86 | 11.72 |
| CDY17559 | Canola | cytoskeleton, nucleus, peroxisome | 31.43 | 11.5 |
| CDY00799 | Canola | peroxisome | 29.52 | 10.4 |
| CDX73802 | Canola | peroxisome | 29.52 | 10.4 |
| CDY08402 | Canola | cytosol | 26.67 | 9.52 |
| CDY50145 | Canola | plastid | 63.81 | 9.25 |
| GSMUA_Achr5P04570_001 | Banana | cytosol | 6.67 | 5.51 |
| CDY64214 | Canola | mitochondrion | 1.9 | 1.17 |
| Solyc03g096650.1.1 | Tomato | cytosol | 0.95 | 1.12 |
| CDY72061 | Canola | cytosol | 0.95 | 0.92 |
| VIT_06s0004g05310.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| CDY05153 | Canola | cytosol, nucleus, plastid | 0.0 | 0.0 |
| KRH29740 | Soybean | cytosol | 0.0 | 0.0 |
| VIT_06s0004g05400.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| VIT_06s0004g05440.t01 | Wine grape | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY16436 | EnsemblPlantsGene:GSBRNA2T00090993001 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | PANTHER:PTHR42898 |
| PANTHER:PTHR42898:SF7 | PFAM:PF13561 | PRINTS:PR00081 | ProteinID:CDY16436 | ProteinID:CDY16436.1 | SUPFAM:SSF51735 |
| UniParc:UPI0004EDD11E | UniProt:A0A078FTU1 | MapMan:35.1 | : | : | : |
Description
BnaA02g12400DBnaA02g12400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FTU1]
Coordinates
chrLK032063:-:677153..678873
Molecular Weight (calculated)
11320.6 Da
IEP (calculated)
4.400
GRAVY (calculated)
0.386
Length
105 amino acids
Sequence
(BLAST)
(BLAST)
001: MIMFFIIPSV IVYSRNLACE WASDSIRANS VAPTFIATPL VDNAFDDEFK KVVESTNPLG RIGKPEEVAS VVAFLCMPAA SYITGQTICV DGGLSVNGFS
101: YQPHA
101: YQPHA
001: MAGAEQSQRW SLKAKTVLVT GGTKGIGHAI VEEFAGFGAV IHTCARNEYE LNECLSKWQK KGFQVTGSVC DASLRPEREK LMQTVSSMFG GKLDILINNL
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG
Arabidopsis Description
Tropinone reductase homolog At1g07440 [Source:UniProtKB/Swiss-Prot;Acc:P0DKI3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.